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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0104900-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:260424:261044:-1 gene:Os12g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 26 description:EF-HAND 2 domain containing protein. (Os12t0104900-00)
Sequence

ATGGCATCGTCAGCTTCGTCGGTGTTCGCGGCCTTCGACAAGGACGGCGACGGCAAGGTG
TCCGCGTCCGAGCTGCGGGGCTGCATGGCGGCGGCGCTCGGGGAGGAGGTGTCCGAGGAG
GAGGCGGCGGCGATCCTCGCAACGGCCGACACCGACGGCGACGGCTTGCTGGACCACCAC
GAGTTCATGAGGCTCTCTGCTGCTCATCAGTTGCAGGAGCCAGCGGAGGAGAGCCTAAGG
TGCCTGAGGGAGGCGTTCGACATGTACGCGGAGGAGGAGGAGACGGCGGTGATCACGCCG
GCGAGCCTGCGGCGGATGCTGAGGCGGCTGGGGTCAGAGCATCAGCGGCTGGAGATGGAG
GAGTGCAGGGCCATGATCTGCAGGTTCGACCTCAACGGCGACGGCGTGCTCTCCTTTGAC
GAGTTCAGGGTCATGATGCTCATGGCTTGA

Peptide Sequence

PEP ID

Os12t0104900-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:260424:261044:-1 gene:Os12g0104900 transcript:Os12t0104900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 26 description:EF-HAND 2 domain containing protein. (Os12t0104900-00)
Sequence

MASSASSVFAAFDKDGDGKVSASELRGCMAAALGEEVSEEEAAAILATADTDGDGLLDHH
EFMRLSAAHQLQEPAEESLRCLREAFDMYAEEEETAVITPASLRRMLRRLGSEHQRLEME
ECRAMICRFDLNGDGVLSFDEFRVMMLMA

Transcript Sequence

Transcript ID

Os12t0104900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:260424:261044:-1 gene:Os12g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 26 description:EF-HAND 2 domain containing protein. (Os12t0104900-00)
Sequence

TCACTGACAGTGCCATGGCATCGTCAGCTTCGTCGGTGTTCGCGGCCTTCGACAAGGACG
GCGACGGCAAGGTGTCCGCGTCCGAGCTGCGGGGCTGCATGGCGGCGGCGCTCGGGGAGG
AGGTGTCCGAGGAGGAGGCGGCGGCGATCCTCGCAACGGCCGACACCGACGGCGACGGCT
TGCTGGACCACCACGAGTTCATGAGGCTCTCTGCTGCTCATCAGTTGCAGGAGCCAGCGG
AGGAGAGCCTAAGGTGCCTGAGGGAGGCGTTCGACATGTACGCGGAGGAGGAGGAGACGG
CGGTGATCACGCCGGCGAGCCTGCGGCGGATGCTGAGGCGGCTGGGGTCAGAGCATCAGC
GGCTGGAGATGGAGGAGTGCAGGGCCATGATCTGCAGGTTCGACCTCAACGGCGACGGCG
TGCTCTCCTTTGACGAGTTCAGGGTCATGATGCTCATGGCTTGACCTACGTTTTATTTTG
TTGCACTATTTCTCATTCATTCATTCTTTTGTTGTCAATTATTTAATTAGTGCAGATGAC
AGATTGATAGCTTGGTAATTCCTCATGTGTCCATATGATGATAGATTCATTCAATTTTAT
TGTTTTTTTACTTTGCAATTT