Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0104400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:226239:230184:-1 gene:Os12g0104400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fatty acid desaturase, type 1 domain containing protein. (Os12t0104400-01)
Sequence	ATGGCGGCGTCGGCGACCCAGGAGGCGGACTGCAAGGCTTCCGAGGACGCCCGTCTCTTC TTCGACGCCGCCAAGCCCCCGCCCTTCCGCATCGGCGACGTCCGCGCCGCCATCCCCGCC CACTGCTGGCGCAAGACCCCCCTCCGCTCCCTCTCCTACGTCGCCCGCGACCTCCTCATC GTCGCCGCCCTCTTCGCCGCAGCCGCCACTCGGATTGACGTCTCCGTCGCCTGGGCGGCC TGGCCGCTCTACTGGGCGGCGCAGGGCACCATGTTCTGGGCGCTCTTCGTCCTCGGCCAC GACTGTGGGCACGGGAGCTTCTCCGACAGCGCCATGCTCAACAACGTCGTCGGCCACCTC CTGCACTCCTTCATCCTCGTCCCCTACCATGGATGGAGAATCAGCCACAGAACACACCAT CAGAACCACGGTCATATCGAGAAGGACGAGTCCTGGCACCCGATCACCGAGAAATTGTAC CGGAAGCTGGAGACGCGCACCAAGAAACTGCGCTTTACATTACCATTTCCATTGCTTGCC TTCCCTGTCTACCTCTGGTACAGAAGTCCGGGCAAGACCGGATCTCACTTTCTGCCGAGC AGCGATCTGTTCAGCCCCAAGGAGAAGAGTGACGTGATTGTCTCCACCACCTGCTGGTGC ATCATGATTTCGTTGCTCGTCGCCTTGGCGTGCGTGTTTGGGTCTGTTCCGGTGCTCATG CTATACGGTGTCCCATATCTTGTATTCGTGATGTGGCTTGATTTGGTGACTTATCTGCAC CACCACGGTCACAATGACCTTCCCTGGTATCGTGGAGAGGAATGGAGCTACCTCCGCGGT GGCCTGACAACGGTGGATCGGGACTACGGGTGGATCAACAACATCCACCATGACATTGGC ACCCATGTCATCCACCACCTTTTCCCCCAAATTCCTCATTATCACCTCGTAGAAGCAACA AAGGCAGCAAGGCCAGTGCTGGGCAGATACTACAGGGAGCCAGAGAAGTCAGGTCCGCTG CCACTTCACCTGTTTGGCGTTCTGCTGAGGAGCTTGAGAGTTGATCACTTTGTCAGCGAC GTCGGGGATGTTGTTTACTACCAAACAGATCACAGCTTGAACGGCACTGACTGGGCCGAA GATGCTAAGCACAAGTGA

Peptide Sequence

PEP ID	Os12t0104400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:226239:230184:-1 gene:Os12g0104400 transcript:Os12t0104400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fatty acid desaturase, type 1 domain containing protein. (Os12t0104400-01)
Sequence	MAASATQEADCKASEDARLFFDAAKPPPFRIGDVRAAIPAHCWRKTPLRSLSYVARDLLI VAALFAAAATRIDVSVAWAAWPLYWAAQGTMFWALFVLGHDCGHGSFSDSAMLNNVVGHL LHSFILVPYHGWRISHRTHHQNHGHIEKDESWHPITEKLYRKLETRTKKLRFTLPFPLLA FPVYLWYRSPGKTGSHFLPSSDLFSPKEKSDVIVSTTCWCIMISLLVALACVFGSVPVLM LYGVPYLVFVMWLDLVTYLHHHGHNDLPWYRGEEWSYLRGGLTTVDRDYGWINNIHHDIG THVIHHLFPQIPHYHLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSD VGDVVYYQTDHSLNGTDWAEDAKHK

Transcript Sequence

Transcript ID	Os12t0104400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:226239:230184:-1 gene:Os12g0104400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fatty acid desaturase, type 1 domain containing protein. (Os12t0104400-01)
Sequence	GAAGGCAACACAGGAGGAGGAGGAGCTTGGTTTCTGGGTTGGGTTGGGTTTGGTTGCGTT GCGGCCCATCCATCGCATTCGCGTTCGCAGGCACAAACCAAACACCTCCCCTCAAATTTC TCTTTCTTGTCTCTTCTCCCTTTCCGCCTCGCCTCGCCTCGCTGCCTGCGCTTCACAAAT CACAAATCGGAATCAGATCCACCACGACACGGCGGCGGCAATGGCGGCGTCGGCGACCCA GGAGGCGGACTGCAAGGCTTCCGAGGACGCCCGTCTCTTCTTCGACGCCGCCAAGCCCCC GCCCTTCCGCATCGGCGACGTCCGCGCCGCCATCCCCGCCCACTGCTGGCGCAAGACCCC CCTCCGCTCCCTCTCCTACGTCGCCCGCGACCTCCTCATCGTCGCCGCCCTCTTCGCCGC AGCCGCCACTCGGATTGACGTCTCCGTCGCCTGGGCGGCCTGGCCGCTCTACTGGGCGGC GCAGGGCACCATGTTCTGGGCGCTCTTCGTCCTCGGCCACGACTGTGGGCACGGGAGCTT CTCCGACAGCGCCATGCTCAACAACGTCGTCGGCCACCTCCTGCACTCCTTCATCCTCGT CCCCTACCATGGATGGAGAATCAGCCACAGAACACACCATCAGAACCACGGTCATATCGA GAAGGACGAGTCCTGGCACCCGATCACCGAGAAATTGTACCGGAAGCTGGAGACGCGCAC CAAGAAACTGCGCTTTACATTACCATTTCCATTGCTTGCCTTCCCTGTCTACCTCTGGTA CAGAAGTCCGGGCAAGACCGGATCTCACTTTCTGCCGAGCAGCGATCTGTTCAGCCCCAA GGAGAAGAGTGACGTGATTGTCTCCACCACCTGCTGGTGCATCATGATTTCGTTGCTCGT CGCCTTGGCGTGCGTGTTTGGGTCTGTTCCGGTGCTCATGCTATACGGTGTCCCATATCT TGTATTCGTGATGTGGCTTGATTTGGTGACTTATCTGCACCACCACGGTCACAATGACCT TCCCTGGTATCGTGGAGAGGAATGGAGCTACCTCCGCGGTGGCCTGACAACGGTGGATCG GGACTACGGGTGGATCAACAACATCCACCATGACATTGGCACCCATGTCATCCACCACCT TTTCCCCCAAATTCCTCATTATCACCTCGTAGAAGCAACAAAGGCAGCAAGGCCAGTGCT GGGCAGATACTACAGGGAGCCAGAGAAGTCAGGTCCGCTGCCACTTCACCTGTTTGGCGT TCTGCTGAGGAGCTTGAGAGTTGATCACTTTGTCAGCGACGTCGGGGATGTTGTTTACTA CCAAACAGATCACAGCTTGAACGGCACTGACTGGGCCGAAGATGCTAAGCACAAGTGAAA AATTAACTTGAAAATTATTGGAGTCACCGTGTACTAGTAGCTTAGTAAGTGAAGAATGGA TTGTTTTCCTGATAGATAGCATATCCATCATAGCATGAACTGCTGAAAGAAAGAGAAATA ATAAGCAGCAAGGGCTACTTACCTGCTCAAAAGCATGCGGCCCTGCAGAACACAGGGATT CATTGATCTGTTGGATCACCATATTCAGATCACTAAACAAGCATTGTCCAATTGTTGTTG TAGCTAGCGGGTCGTTCAGTTTTGATTAGTTCTGAAAGTGTCCAAGTTATACCGTGTAAC CCTTTGGAGTTTGCCAGGCAATTCAATGTCTGGAGTTTGTATGTGCCATTGAGCAGACAA TTATGATCCGAATTAAGCTCTGCACCTTAATTTTTCCATACTGAATCACTCACAATGGAG TTTATTTGC