Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os12t0102600-01

CDS Infomation

cds chromosome:IRGSP-1.0:12:125923:128272:1 gene:Os12g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HCF152. (Os12t0102600-01)

Sequence

ATGAGCAGCTCATCCAATGCACTTGTGCAGCACTACTACTCTTGCAAGCCCCCACCGCCC
CCCAGATTAGTACTAGTACCATTCTTCTTCTCCGGCTCCGGCTCCGGCACCAACAACACC
GCCTCCTCCCCTGCTGCTGCATCCTCCACGCACACTCACACTCACACTGCAGATGCCAAC
GCCCAGCTGGACGCACACCTCCTTTCCCTCCTCCGCGACGGCCACACCGACGCCGCCTAC
CACCTCTTCGCCTCCAACCCCTCCCTCCCCCTCTCCCCTGTCTCCGCCTCCCGCCTCCTC
GCCCAGCTCTCCTATTCTTCCTTCTCCCGCGCCTCCGCCCTCCTCCACCGCCTCCGCGCC
CGCCAAGCCCTCCACCTCCTCGACGCCAACTCCCTCTCCCTCGCCTCCTCCGCCTCCGCC
CGCTCCAACAACCCCCACCTCGCCTATTCCCTCCTCCTCTCCATGCTCCGACGCGGCCTC
CTCCCCGACCGCCGCGCCTACACCGCCGCCCTCGCGCGCCTCCCCCCTTCCCGCGCCCTC
CGCCTCTTCGACGCCCTCCTCCACCACCTCCGCCACCACCACAATAAAACTAATTCCCTC
CCCGACACCGCCGCCTTCAACGCCGCGCTCAGCGCCTGCGCCAACGCCGGAGACTGCATC
CGCTTCCGCCACCTCTTCGACCAGATGCCCGCCTGGAACGCGCCGCCTGACGCGCTCACC
TACAACGTCCTCATCAAGATGTGCGCGCGCGCCGGCCGCAAGGACCTCGTCGCGCGCGTG
CTCCACCGGATCCTCTCCTCTGGTCTCACCCCCTGCGCCACCACGTTCCACTCCCTCGTC
GCCGCCTACGTCGGCTTCGGCGACATCCCCACGGCCGAGAGGATCGTGCAGGCCATGCGC
GAAAGACGCACCGACATCTGCTTGCTGTTCCGGGCTGTCGCGGACGACCACATAATCAGC
CACGACCAGCAGAGCTGTGTGCTGGAGGACATCGTCAAGCCGTGGGAACAAGAGGAGGTG
CCGCTGCTCCCCAAGGCTTACCCGCCCAACTCCAGAGTGTACACCACGCTCATGAAGGGG
TACATGAACGCCGGGCGCGTGGAGGACGTGGTGGCCATGCTGCGCGCGATGCGGCGAGAG
GGAGAGACGTCGCCAGCGAGCCGCCCCGACCACGTCACCTACACCACGGTCATCTCCACG
CTGGTGGCGGCCGGGGACATGGAGCGAGCGCGCGCCGTGCTGGAGGAGATGGGGCAAGCA
GGGGTGGCAGCCAGCCGCGTGACATACAACGTCCTCATCAAGGGCTACTGCCAGCAGCTG
CAGGCCGGAAAGGCCAAGGAGCTCCTCGCCGTAGACATGGCTGAGGCGGGCATCCAGCCC
GACGTGGTGACGTACAACACGCTCATCGACGGGTGCGTGCTGACGGACGACAGCGCGGGC
GCGGTGGCGCTGTTCAACGAGATGCGCGAGCGGGGCATCGCGCCGTCGGCGGTGAGCTAC
ACGACGCTGATGAAGGCGTTCGCGGCGTCGGGGCAGCCGAAGCTGGCGCACAAGGTGTTC
GATGAGATGGAGAAGGACCCGCGGGTGGCAGTGGACCGGGCGGCGTGGAACATGCTGGTG
GAGGCGTACTGCAGGCTGGGGCTGCTGGAGTCGGCGAAGAAGGTGGTGGAGAGGATGAAG
GCGCGGGGAGTGCAGCCGGACGTGGCGACGTACGGGAGCCTGGCGAAGGGGATCGCGGTG
GCGAGGCGGCCGGGGGAGGCGCTGCTGCTGTGGGAGGAGATAAAGGAGAAGGAGGTGGAC
GGGGAGGTGGTGGAGGCGCTGGCGGACGTGTGCGTGCGGGCGGCGCTGTTCAGGAAGGCG
CTGGAGATGGTGGCGAGGATGGAGGAGATGGGGGTGGAGCCCAACAAGGCCAAGTACAAG
AGGATGTACGTGGACCTGCACTCGCGGATGTTCACCAGCAAGCACGCGTCGCAGGCGAGG
CAGGATCGGAGGCGGGAGAGGAAGCGCGCCGCGGAGGCATTCAAGTTCTGGCTCGGCCTC
CCCAACTCCTACTACGCCACCGACTGGCGCCTCCAAGACGACGGCCTCAACTAA

Peptide Sequence

PEP ID

Os12t0102600-01

PEP Infomation

pep chromosome:IRGSP-1.0:12:125923:128272:1 gene:Os12g0102600 transcript:Os12t0102600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HCF152. (Os12t0102600-01)

Sequence

MSSSSNALVQHYYSCKPPPPPRLVLVPFFFSGSGSGTNNTASSPAAASSTHTHTHTADAN
AQLDAHLLSLLRDGHTDAAYHLFASNPSLPLSPVSASRLLAQLSYSSFSRASALLHRLRA
RQALHLLDANSLSLASSASARSNNPHLAYSLLLSMLRRGLLPDRRAYTAALARLPPSRAL
RLFDALLHHLRHHHNKTNSLPDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALT
YNVLIKMCARAGRKDLVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMR
ERRTDICLLFRAVADDHIISHDQQSCVLEDIVKPWEQEEVPLLPKAYPPNSRVYTTLMKG
YMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARAVLEEMGQA
GVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAG
AVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLV
EAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIAVARRPGEALLLWEEIKEKEVD
GEVVEALADVCVRAALFRKALEMVARMEEMGVEPNKAKYKRMYVDLHSRMFTSKHASQAR
QDRRRERKRAAEAFKFWLGLPNSYYATDWRLQDDGLN

Transcript Sequence

Transcript ID

Os12t0102600-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:12:125923:128272:1 gene:Os12g0102600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HCF152. (Os12t0102600-01)

Sequence

CTCCTCCTTTCTTCTTCTTCCTGGCTTCCTGCTCAGTCGACTTGGTGGGAATTCCATTCC
CCTGCAGTTGCAATGCTTGGGTGAATCCAGCTCCGTCGTCGCCATCCCCACCCCCACCCG
CACCGGAGAATGAGCAGCTCATCCAATGCACTTGTGCAGCACTACTACTCTTGCAAGCCC
CCACCGCCCCCCAGATTAGTACTAGTACCATTCTTCTTCTCCGGCTCCGGCTCCGGCACC
AACAACACCGCCTCCTCCCCTGCTGCTGCATCCTCCACGCACACTCACACTCACACTGCA
GATGCCAACGCCCAGCTGGACGCACACCTCCTTTCCCTCCTCCGCGACGGCCACACCGAC
GCCGCCTACCACCTCTTCGCCTCCAACCCCTCCCTCCCCCTCTCCCCTGTCTCCGCCTCC
CGCCTCCTCGCCCAGCTCTCCTATTCTTCCTTCTCCCGCGCCTCCGCCCTCCTCCACCGC
CTCCGCGCCCGCCAAGCCCTCCACCTCCTCGACGCCAACTCCCTCTCCCTCGCCTCCTCC
GCCTCCGCCCGCTCCAACAACCCCCACCTCGCCTATTCCCTCCTCCTCTCCATGCTCCGA
CGCGGCCTCCTCCCCGACCGCCGCGCCTACACCGCCGCCCTCGCGCGCCTCCCCCCTTCC
CGCGCCCTCCGCCTCTTCGACGCCCTCCTCCACCACCTCCGCCACCACCACAATAAAACT
AATTCCCTCCCCGACACCGCCGCCTTCAACGCCGCGCTCAGCGCCTGCGCCAACGCCGGA
GACTGCATCCGCTTCCGCCACCTCTTCGACCAGATGCCCGCCTGGAACGCGCCGCCTGAC
GCGCTCACCTACAACGTCCTCATCAAGATGTGCGCGCGCGCCGGCCGCAAGGACCTCGTC
GCGCGCGTGCTCCACCGGATCCTCTCCTCTGGTCTCACCCCCTGCGCCACCACGTTCCAC
TCCCTCGTCGCCGCCTACGTCGGCTTCGGCGACATCCCCACGGCCGAGAGGATCGTGCAG
GCCATGCGCGAAAGACGCACCGACATCTGCTTGCTGTTCCGGGCTGTCGCGGACGACCAC
ATAATCAGCCACGACCAGCAGAGCTGTGTGCTGGAGGACATCGTCAAGCCGTGGGAACAA
GAGGAGGTGCCGCTGCTCCCCAAGGCTTACCCGCCCAACTCCAGAGTGTACACCACGCTC
ATGAAGGGGTACATGAACGCCGGGCGCGTGGAGGACGTGGTGGCCATGCTGCGCGCGATG
CGGCGAGAGGGAGAGACGTCGCCAGCGAGCCGCCCCGACCACGTCACCTACACCACGGTC
ATCTCCACGCTGGTGGCGGCCGGGGACATGGAGCGAGCGCGCGCCGTGCTGGAGGAGATG
GGGCAAGCAGGGGTGGCAGCCAGCCGCGTGACATACAACGTCCTCATCAAGGGCTACTGC
CAGCAGCTGCAGGCCGGAAAGGCCAAGGAGCTCCTCGCCGTAGACATGGCTGAGGCGGGC
ATCCAGCCCGACGTGGTGACGTACAACACGCTCATCGACGGGTGCGTGCTGACGGACGAC
AGCGCGGGCGCGGTGGCGCTGTTCAACGAGATGCGCGAGCGGGGCATCGCGCCGTCGGCG
GTGAGCTACACGACGCTGATGAAGGCGTTCGCGGCGTCGGGGCAGCCGAAGCTGGCGCAC
AAGGTGTTCGATGAGATGGAGAAGGACCCGCGGGTGGCAGTGGACCGGGCGGCGTGGAAC
ATGCTGGTGGAGGCGTACTGCAGGCTGGGGCTGCTGGAGTCGGCGAAGAAGGTGGTGGAG
AGGATGAAGGCGCGGGGAGTGCAGCCGGACGTGGCGACGTACGGGAGCCTGGCGAAGGGG
ATCGCGGTGGCGAGGCGGCCGGGGGAGGCGCTGCTGCTGTGGGAGGAGATAAAGGAGAAG
GAGGTGGACGGGGAGGTGGTGGAGGCGCTGGCGGACGTGTGCGTGCGGGCGGCGCTGTTC
AGGAAGGCGCTGGAGATGGTGGCGAGGATGGAGGAGATGGGGGTGGAGCCCAACAAGGCC
AAGTACAAGAGGATGTACGTGGACCTGCACTCGCGGATGTTCACCAGCAAGCACGCGTCG
CAGGCGAGGCAGGATCGGAGGCGGGAGAGGAAGCGCGCCGCGGAGGCATTCAAGTTCTGG
CTCGGCCTCCCCAACTCCTACTACGCCACCGACTGGCGCCTCCAAGACGACGGCCTCAAC
TAACACCCTACTATATACTACTAATGATAATGTTAAATCTTAACACATGTTTTATGTACT
ACTCCTACAGTCCATGAAGCTACTTGCTTCCCTTGCTCATTATGTACAACTTCATAGTAA
TTTATTTTCC