Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0102500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:112744:120226:-1 gene:Os12g0102500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-01);Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-02)
Sequence	ATGCCGTCTGCTTCCGCCGCTCTTGTGCTCCTCTTCGTCGCCTTCTCGCTCTCCAATGCT CAGCCTGGTTTCATCAGCTTGGATTGCGGGGGAGACGATGATTACACGGATGGCATTGGG ATCCAGTGGACTTCTGATGCCAAGTTTGTCTCTGCTGGCCAGAAAGCGAACCTCTTGCTC CAAAATCAACAATTGCAGCAATATACCACCGTTCGCTCTTTTCCAGCAGACAACAGGAAG TATTGCTACACCATGAATGTCAGGAACAGAACACGCTACCTTGTTAGAGCCACCTTCCTC TATGGCAACTTCGACAACAGCAATGTCTACCCAAAGTTTGATCTCTCCCTTGGACCGACC CCATGGACCACCGTTGTCATTGATGATGCCACCACCCCAGTCGTCCAGGAGGCGATTATC CTCGCTGCTGCTCCAACACTCAGCGTTTGCCTCTCTAATGCCAGCACTGGACAGCCCTTT ATTTCTACTCTCGAGCTTCGCCAATTTAACGGCTCCCTCTACTACACCACTGATGAAAAA CAGTTCTTTCTTAGACTCTCTGCGAGGATCAATTTTGGTGCTGAAAGCAATGCATCAGTC AGGTATCCTGATGATCCATTTGATAGAATATGGGAGTCTGATTTAGTGAGGCGAGCAAAT TACCTTGTCGATGTTGCTCCGGGGACGGAGAGAATATCAACTACAAAACCCATCTTCGTC AGTACCAACGAAGAACCACCTCAAAGGGTCATGCAAACTGCAGTTGTTGGCAAAAATGGA TCCTTGACCTACCGGATTGATTTGGAAGATTTCCCAGGAAATGCATGGGGAGTCTCATAT TTTGCAGAAATTGAAGATTTGACCCCAAATCAAACTAGGAAATTTAAGTTAGTCATTCCA GGCAAGCCAGAATTCAGTAAACCAACTGTTGATGTGGAAGAGAATGCTCAGGGAAAGTAT CGTCTATATGAACCAGGCTACACAAATATTCCACTTCCATTTGTTTTCTCTTTTGGATTC AAGAAGACTAATGATTCGTCAGAGGGACCTATATTGAATGCCATGGAGATCTACAAATAT ATAGAGATTTCTGTGGGATCTCAAGATGCAAACATTATGGCCAGCTTGGTCTCACGGTAT CCAGAAGCAGGTTGGGCACAAGAGGGTGGTGACCCTTGCTTACCAGCATCATGGTCTTGG GTGCAATGCAGTTCTGAGGCAGCACCTAGGATATTTTCAATCTCATTGTCAGGGAAGAAC ATTACAGGGAGTATCCCTGTGGAATTAACGAAGCTATCGGGGCTGGTCGAACTAAAGCTT GATGGTAACTCATTTACTGGTCAAATTCCTGATTTCACTGGATGCCATGATTTACAATAT ATTCACCTTGAGGACAACCAATTAACCGGTGCATTGCCACCTTCCTTGGGAGAACTACCT AACCTGAAAGAGTTGTATATTCAGAACAATAAGCTGTCTGGAGAGGTCCCACAAGCGCTT TTCAAAAAGAGCATTATTTTCAACTTCTCAGGAAACAGTGACCTTCGCATGGGACACAGT AACACTGGCCGCACTATAGTAATTATTGTATGTGCTGTGGTTGGGGCCATTTTGATTCTT GTTGCTGCTATTGTTTGTTACCTGTTCACATGCAAAAGGAAGAAGAAATCATCGGACGAA ACCGTTGTTATTGCGGCACCAGCAAAAAAGCTAGGCTCATTTTTCAGTGAAGTGGCCACG GAATCGGCGCACAGATTTGCATTGTCTGAAATTGAAGATGCTACTGACAAATTTGACAGA AGAATTGGTTCGGGAGGGTTTGGCATAGTATACTATGGAAAGCTTACAGATGGGAGAGAA ATCGCAGTCAAACTTCTCACAAATGACTCCTATCAAGGCATCCGAGAATTCCTGAATGAG GTAACATTGCTTTCAAGAATTCATCATAGAAACCTGGTGAGCTTCCTTGGTTACAGCCAG CAAGATGGTAAAAATATACTTGTGTATGAATTCATGCATAACGGGACGTTAAAAGAACAC CTCCGTGGAGGCCCTGATGATGTAAAAATAAATAGCTGGGTCAAGCGTCTTGAGATAGCA GAAGATGCTGCAAAAGGAATAGAGTATCTCCACACAGGATGCTCCCCAACTATCATCCAC AGAGACCTCAAGAGCAGTAACATTCTCCTTGACAAGAACATGAGAGCAAAAGTTGCAGAC TTTGGCTTGTCAAAACCTGTTGTCGACGGGTCTCATGTATCAAGTATAGTTAGAGGAACA GTTGGATATCTGGACCCAGAGTACTATATCTCGCAGCAGCTAACAGAGAAGAGTGATATG TACAGTTTTGGTGTCATTTTACTTGAGCTAATCTCAGGCCATGAACCAATCTCAAATGAC AACTTTGGGCTCCACTGCCGTAACATTGTTGAATGGGCTAGATCGCACATGGAGAGTGGG GATATCCACGGCATCATTGATCAGTCGTTAGACGCAGGGTACGACCTGCAGTCGGTGTGG AAGATTGCGGAGGTGGCGACGATGTGCGTGAAGCCCAAGGGGGTGCTGAGGCCGTCCATC TCGGAGGTGCTCAAGGAGATTCAGGACGCCATTGCCATCGAGCTGCAACGGGAGCTGCCC TCCAGCATTCACCACCTCATGTCCAAGACGTCTCCCTCCGAAGCCGTCAACACGACAGGC AGTCTGCAAGACCTGGAGCAGAATGCGTCGTTTGATGAGCTGCTCATGCGCCCAGGTCTC AGGTAG

Peptide Sequence

PEP ID	Os12t0102500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:112744:120226:-1 gene:Os12g0102500 transcript:Os12t0102500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-01);Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-02)
Sequence	MPSASAALVLLFVAFSLSNAQPGFISLDCGGDDDYTDGIGIQWTSDAKFVSAGQKANLLL QNQQLQQYTTVRSFPADNRKYCYTMNVRNRTRYLVRATFLYGNFDNSNVYPKFDLSLGPT PWTTVVIDDATTPVVQEAIILAAAPTLSVCLSNASTGQPFISTLELRQFNGSLYYTTDEK QFFLRLSARINFGAESNASVRYPDDPFDRIWESDLVRRANYLVDVAPGTERISTTKPIFV STNEEPPQRVMQTAVVGKNGSLTYRIDLEDFPGNAWGVSYFAEIEDLTPNQTRKFKLVIP GKPEFSKPTVDVEENAQGKYRLYEPGYTNIPLPFVFSFGFKKTNDSSEGPILNAMEIYKY IEISVGSQDANIMASLVSRYPEAGWAQEGGDPCLPASWSWVQCSSEAAPRIFSISLSGKN ITGSIPVELTKLSGLVELKLDGNSFTGQIPDFTGCHDLQYIHLEDNQLTGALPPSLGELP NLKELYIQNNKLSGEVPQALFKKSIIFNFSGNSDLRMGHSNTGRTIVIIVCAVVGAILIL VAAIVCYLFTCKRKKKSSDETVVIAAPAKKLGSFFSEVATESAHRFALSEIEDATDKFDR RIGSGGFGIVYYGKLTDGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRNLVSFLGYSQ QDGKNILVYEFMHNGTLKEHLRGGPDDVKINSWVKRLEIAEDAAKGIEYLHTGCSPTIIH RDLKSSNILLDKNMRAKVADFGLSKPVVDGSHVSSIVRGTVGYLDPEYYISQQLTEKSDM YSFGVILLELISGHEPISNDNFGLHCRNIVEWARSHMESGDIHGIIDQSLDAGYDLQSVW KIAEVATMCVKPKGVLRPSISEVLKEIQDAIAIELQRELPSSIHHLMSKTSPSEAVNTTG SLQDLEQNASFDELLMRPGLR

Transcript Sequence

Transcript ID	Os12t0102500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:112744:120226:-1 gene:Os12g0102500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-01);Serine/threonine protein kinase-related domain containing protein. (Os12t0102500-02)
Sequence	GCTTTTCTCCAAGATTATTACACAGAGACAGAGGGTGCAGAGGCTGGCTGTGAGTGAGAG CAGGAGACTGGGATTGGGACCCTCCTGTCTTCTTCTTTCCCCTTCCTCCTGTCCTGCTCC TCTTCTTCTTCTTCTTGGAATACTCCTGCTTGGTTTGGACTTGTTCCAAGGAGGGAGCAT ATGGATTGATTCACCAGCCCGCACCCACTGCTGTGCTAATCAATCCATCATCAATTCAGA TTACTGAGGGAGATGCCGTCTGCTTCCGCCGCTCTTGTGCTCCTCTTCGTCGCCTTCTCG CTCTCCAATGCTCAGCCTGGTTTCATCAGCTTGGATTGCGGGGGAGACGATGATTACACG GATGGCATTGGGATCCAGTGGACTTCTGATGCCAAGTTTGTCTCTGCTGGCCAGAAAGCG AACCTCTTGCTCCAAAATCAACAATTGCAGCAATATACCACCGTTCGCTCTTTTCCAGCA GACAACAGGAAGTATTGCTACACCATGAATGTCAGGAACAGAACACGCTACCTTGTTAGA GCCACCTTCCTCTATGGCAACTTCGACAACAGCAATGTCTACCCAAAGTTTGATCTCTCC CTTGGACCGACCCCATGGACCACCGTTGTCATTGATGATGCCACCACCCCAGTCGTCCAG GAGGCGATTATCCTCGCTGCTGCTCCAACACTCAGCGTTTGCCTCTCTAATGCCAGCACT GGACAGCCCTTTATTTCTACTCTCGAGCTTCGCCAATTTAACGGCTCCCTCTACTACACC ACTGATGAAAAACAGTTCTTTCTTAGACTCTCTGCGAGGATCAATTTTGGTGCTGAAAGC AATGCATCAGTCAGGTATCCTGATGATCCATTTGATAGAATATGGGAGTCTGATTTAGTG AGGCGAGCAAATTACCTTGTCGATGTTGCTCCGGGGACGGAGAGAATATCAACTACAAAA CCCATCTTCGTCAGTACCAACGAAGAACCACCTCAAAGGGTCATGCAAACTGCAGTTGTT GGCAAAAATGGATCCTTGACCTACCGGATTGATTTGGAAGATTTCCCAGGAAATGCATGG GGAGTCTCATATTTTGCAGAAATTGAAGATTTGACCCCAAATCAAACTAGGAAATTTAAG TTAGTCATTCCAGGCAAGCCAGAATTCAGTAAACCAACTGTTGATGTGGAAGAGAATGCT CAGGGAAAGTATCGTCTATATGAACCAGGCTACACAAATATTCCACTTCCATTTGTTTTC TCTTTTGGATTCAAGAAGACTAATGATTCGTCAGAGGGACCTATATTGAATGCCATGGAG ATCTACAAATATATAGAGATTTCTGTGGGATCTCAAGATGCAAACATTATGGCCAGCTTG GTCTCACGGTATCCAGAAGCAGGTTGGGCACAAGAGGGTGGTGACCCTTGCTTACCAGCA TCATGGTCTTGGGTGCAATGCAGTTCTGAGGCAGCACCTAGGATATTTTCAATCTCATTG TCAGGGAAGAACATTACAGGGAGTATCCCTGTGGAATTAACGAAGCTATCGGGGCTGGTC GAACTAAAGCTTGATGGTAACTCATTTACTGGTCAAATTCCTGATTTCACTGGATGCCAT GATTTACAATATATTCACCTTGAGGACAACCAATTAACCGGTGCATTGCCACCTTCCTTG GGAGAACTACCTAACCTGAAAGAGTTGTATATTCAGAACAATAAGCTGTCTGGAGAGGTC CCACAAGCGCTTTTCAAAAAGAGCATTATTTTCAACTTCTCAGGAAACAGTGACCTTCGC ATGGGACACAGTAACACTGGCCGCACTATAGTAATTATTGTATGTGCTGTGGTTGGGGCC ATTTTGATTCTTGTTGCTGCTATTGTTTGTTACCTGTTCACATGCAAAAGGAAGAAGAAA TCATCGGACGAAACCGTTGTTATTGCGGCACCAGCAAAAAAGCTAGGCTCATTTTTCAGT GAAGTGGCCACGGAATCGGCGCACAGATTTGCATTGTCTGAAATTGAAGATGCTACTGAC AAATTTGACAGAAGAATTGGTTCGGGAGGGTTTGGCATAGTATACTATGGAAAGCTTACA GATGGGAGAGAAATCGCAGTCAAACTTCTCACAAATGACTCCTATCAAGGCATCCGAGAA TTCCTGAATGAGGTAACATTGCTTTCAAGAATTCATCATAGAAACCTGGTGAGCTTCCTT GGTTACAGCCAGCAAGATGGTAAAAATATACTTGTGTATGAATTCATGCATAACGGGACG TTAAAAGAACACCTCCGTGGAGGCCCTGATGATGTAAAAATAAATAGCTGGGTCAAGCGT CTTGAGATAGCAGAAGATGCTGCAAAAGGAATAGAGTATCTCCACACAGGATGCTCCCCA ACTATCATCCACAGAGACCTCAAGAGCAGTAACATTCTCCTTGACAAGAACATGAGAGCA AAAGTTGCAGACTTTGGCTTGTCAAAACCTGTTGTCGACGGGTCTCATGTATCAAGTATA GTTAGAGGAACAGTTGGATATCTGGACCCAGAGTACTATATCTCGCAGCAGCTAACAGAG AAGAGTGATATGTACAGTTTTGGTGTCATTTTACTTGAGCTAATCTCAGGCCATGAACCA ATCTCAAATGACAACTTTGGGCTCCACTGCCGTAACATTGTTGAATGGGCTAGATCGCAC ATGGAGAGTGGGGATATCCACGGCATCATTGATCAGTCGTTAGACGCAGGGTACGACCTG CAGTCGGTGTGGAAGATTGCGGAGGTGGCGACGATGTGCGTGAAGCCCAAGGGGGTGCTG AGGCCGTCCATCTCGGAGGTGCTCAAGGAGATTCAGGACGCCATTGCCATCGAGCTGCAA CGGGAGCTGCCCTCCAGCATTCACCACCTCATGTCCAAGACGTCTCCCTCCGAAGCCGTC AACACGACAGGCAGTCTGCAAGACCTGGAGCAGAATGCGTCGTTTGATGAGCTGCTCATG CGCCCAGGTCTCAGGTAGAGGTAGCACATACGGATTACAGACTCTTCTAATACTATATTT CTAATATTCGTTGATAGGTTAAGCAAGCTGTGCATGACTTGTTTAGATTTGCCACCGAGC AACGAATTTTGGGTGAATTTGTCCTTCAGGTCGTCGTGCACTTTTGAAATGATCATGTGC ATTCATTCTCGTTCATTCTTACATTGGCTCTTGTTCTCTTCTCCCCCTCGAATTCTTGTA TCAAAAACGACCAAAAAACAAGATCGATTCATAATACCGTGATATGATTATCAGAACGTT TCCTTTCAGATTG