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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0102350-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:103029:103978:-1 gene:Os12g0102350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to WRKY transcription factor 57. (Os12t0102350-01)
Sequence

ATGGCACACGGCGGCGGCGAGGAAGAGGAGGAGCGGGTGCTGAGCCACGGCGACGTGGTG
CTGCTCCGCTGCGACCTCACCATCCTCCGTGGCCCCCACTTCCTCAACGACCGCATCATC
GCCTTCTACCTCGCCCACCTCGCCGCCGACCACCACGACGACGACCTACTCCTGCTTCCC
CCCTCCGTCCCCTACCTCCTCTCCAACCTCCCCGACCCCGCCTCCGTCGCCGCCGTCGCC
GACCCCCTCCGCCTCGCCTCCCGCCGCCTCGTCCTCCTCCCCGTCAACGACAACCCCGAC
GTCTCCCACGCCGAGGGCGGCTCCCACTGGACCCTCCTCGTCCTCGACAACTCCAACGCC
GTCTCCGGCCCCCGCTTCGTCCACCACGACAGCCTCCCACCCACCAACCTGCCCTCCGCG
CGCCGCCTCGCCGCCGTGCTCCGCCCGCTGCTCCCCGCCTCCGCGATCCCGCTCATCGAG
GGCCCCACGCCCAGGCAGACAAACGGCTACGACTGCGGCGTCTTCGTGCTAGCGGTGGCC
AGGGCCATCTGCAACTGGTGGCCCACCCGCGCCCGCCATTCCAATTCCGATTCCGATTGG
TTGGAGGCCGTGAAGAGGGAGGTGAACGCCGACAGCGTCAAGGCCATGAGGACCCAGCTG
CTGCAGCTCATCCATACCCTCATCCAAAACAACACCACCACCAACCAACATTCGTGCTAG

Peptide Sequence

PEP ID

Os12t0102350-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:103029:103978:-1 gene:Os12g0102350 transcript:Os12t0102350-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to WRKY transcription factor 57. (Os12t0102350-01)
Sequence

MAHGGGEEEEERVLSHGDVVLLRCDLTILRGPHFLNDRIIAFYLAHLAADHHDDDLLLLP
PSVPYLLSNLPDPASVAAVADPLRLASRRLVLLPVNDNPDVSHAEGGSHWTLLVLDNSNA
VSGPRFVHHDSLPPTNLPSARRLAAVLRPLLPASAIPLIEGPTPRQTNGYDCGVFVLAVA
RAICNWWPTRARHSNSDSDWLEAVKREVNADSVKAMRTQLLQLIHTLIQNNTTTNQHSC

Transcript Sequence

Transcript ID

Os12t0102350-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:103029:103978:-1 gene:Os12g0102350 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to WRKY transcription factor 57. (Os12t0102350-01)
Sequence

TCCTCCGCCCACCCCACCGGCGATGGCACACGGCGGCGGCGAGGAAGAGGAGGAGCGGGT
GCTGAGCCACGGCGACGTGGTGCTGCTCCGCTGCGACCTCACCATCCTCCGTGGCCCCCA
CTTCCTCAACGACCGCATCATCGCCTTCTACCTCGCCCACCTCGCCGCCGACCACCACGA
CGACGACCTACTCCTGCTTCCCCCCTCCGTCCCCTACCTCCTCTCCAACCTCCCCGACCC
CGCCTCCGTCGCCGCCGTCGCCGACCCCCTCCGCCTCGCCTCCCGCCGCCTCGTCCTCCT
CCCCGTCAACGACAACCCCGACGTCTCCCACGCCGAGGGCGGCTCCCACTGGACCCTCCT
CGTCCTCGACAACTCCAACGCCGTCTCCGGCCCCCGCTTCGTCCACCACGACAGCCTCCC
ACCCACCAACCTGCCCTCCGCGCGCCGCCTCGCCGCCGTGCTCCGCCCGCTGCTCCCCGC
CTCCGCGATCCCGCTCATCGAGGGCCCCACGCCCAGGCAGACAAACGGCTACGACTGCGG
CGTCTTCGTGCTAGCGGTGGCCAGGGCCATCTGCAACTGGTGGCCCACCCGCGCCCGCCA
TTCCAATTCCGATTCCGATTGGTTGGAGGCCGTGAAGAGGGAGGTGAACGCCGACAGCGT
CAAGGCCATGAGGACCCAGCTGCTGCAGCTCATCCATACCCTCATCCAAAACAACACCAC
CACCAACCAACATTCGTGCTAGCTAGCTGTTGCTCTTTCACAACTTATTTGTAGTCTTCG
TGTTCTTACTGATATTATATATATGGTTTTCTGTGAGCACAGCAAGAACAACATGTACAA
ATAGAACAGGTCTTGTGTAGTAATCTTTTTGCAGAATTTTGGGGTCCAAATACTCTTTAC
TGTTGGTTATGGTTAATGAAACAATGCTATTGTGCCTATTATTTGAGTAT