Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0101000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:37034:43021:1 gene:Os12g0101000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 39, CCT (CO, CO-LIKE and TOC1) domain protein 39, CCT domain protein 39, CCT MOTIF FAMILY (CMF) gene 13 description:Similar to RNase P subunit p30 family protein, expressed. (Os12t0101000-01);Similar to RNase P subunit p30 family protein, expressed. (Os12t0101000-02);Similar to CCT motif family protein. (Os12t0101000-03)
Sequence	GATCTGCTATCTTTGGACGTTAATCCAGAACCTTCTTCCGACAAATATGAATTGCTATCT TACAAAGGAGAACCGCAATCTCTTGATATAAATCCAGAACCTTCTGCCAATAAAGATGAA CTACTGTATTTACCCATAAATGCTCTCACCGAAGCATCAAGTCATGTACCTTATGATGGT GATGAGTCCCTCTTTGTCGAGCAGCAAGAGCAGTTAAGCCATGGCAACGAAATCATATTC CCAGTTGAAACTCAAGAAGGGCCTGTGCAAGTTAGCAGAGGTGAAAGTCTTATGACTTGT GTATTGTCTACCTTGCCAGCATCTTGTGAGCAGCATAGTGTTGCTACCAATTTGGATAAT CCTGGAAACAATGAAACTGTTATGGCTCATGATGTGCAGACTGCTGCTGTCTCTTCCTTT GATCTGAAAGGCATTGAGAAACATGTTGAATCTCTGCATGATGCTATGGAACTAGATGGT ACAGAGTCAAGTAAAATGAACCTCATTGCAGATTTTACCGCTCCCTTATCTTCTGATGAT AGCTTGGTGTGTTATGCTATTCCATGTAGTATGGAACTTTCTGACACGAGTGTCGTGAAT AAGTGCCCTCACCAGTCTACTGGCTTCCCAGATTATGCTAAAGCTTGTACAGAATGTGAC TCTGGGTTGACCTCCTGTGAGAGGGTTGATAGGATATCACAGGATCATGACATTCTTTCT GGTTCCAGTATTTACTCTAAGAATAAGGACCTCTACTCTTACAGTGACATCTCAGTTTTT TCTGAGACTCACAAAGATTTTGCAGAACCGCTAGAGTTGCCTCCATGTGGGAAAGATGAT GAGGCGCCACCAGATCTTGCAGCTCAATTGCACTGTAATTCATGCAAGGATGTTATGATG CCACCGCAAGTTATAAGCGATGAAGTAGAGCCAGTTGACAGAGGAGCAACTATTTTAGTG GAACATACTCCCTGTGGTCCAGAGACTGCCTTGACTGCTTTTCTTTATGATAAAGGATCC ATTGATACAACCAGTAAAACTGATGAGTTGGCAAAGCAAAACTCAAACTCTCTGGAGGGA GATGTTGCTAAAATACATGAACAACTACTAAACTATTCTTATGCTAGTGGTGAGGTGGAG ATATCCCTAACTAGATCAGAAAAGCGAACCAAAAAATTAAGGTCGCAACATCCGATTTAT GTTCCTTTCTTGGGCTTCCTCAAGTCTGTGTCCTTTAAGAAGAAAGCATCCAAGGGCTGG AGCTCATCATCATCTTCGTCGTCGTCGCTCCGCCGGGTGTTGAGCACCGGAGGAGGCCTG GTGGAGGAGGAGCGGCGGGAGCGCATTGACAAGTACCGGAGCAAGCGCAATCAACGCAAT TTCGACAAGAAGATCACCTACGCTTGCCGGAAGACGCTCGCGGACAGCCGGCCGAGGGTG AAGGGCCGCTTCGCCCGTAACTCCTCCGACGACGCTGCTGCTGCTGCTGCAGCTCAAGTC GAGGTGTCGCCGGCGACGAATAATAATGTGCCGGAGTGGTGGCCGGCAGTGCAGGAGGCG CTGGCCAGGCAGGAGCAGGAGGCGGCTGGCCTCCATCTCTGCGACACCGCCGACGATGAC CTGCTAGCCGCCTACCTCGGCGTCTCCTCCATCGATCTCTACTCACCCCGCGGCCACTGA

Peptide Sequence

PEP ID	Os12t0101000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:37034:43021:1 gene:Os12g0101000 transcript:Os12t0101000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 39, CCT (CO, CO-LIKE and TOC1) domain protein 39, CCT domain protein 39, CCT MOTIF FAMILY (CMF) gene 13 description:Similar to RNase P subunit p30 family protein, expressed. (Os12t0101000-01);Similar to RNase P subunit p30 family protein, expressed. (Os12t0101000-02);Similar to CCT motif family protein. (Os12t0101000-03)
Sequence	DLLSLDVNPEPSSDKYELLSYKGEPQSLDINPEPSANKDELLYLPINALTEASSHVPYDG DESLFVEQQEQLSHGNEIIFPVETQEGPVQVSRGESLMTCVLSTLPASCEQHSVATNLDN PGNNETVMAHDVQTAAVSSFDLKGIEKHVESLHDAMELDGTESSKMNLIADFTAPLSSDD SLVCYAIPCSMELSDTSVVNKCPHQSTGFPDYAKACTECDSGLTSCERVDRISQDHDILS GSSIYSKNKDLYSYSDISVFSETHKDFAEPLELPPCGKDDEAPPDLAAQLHCNSCKDVMM PPQVISDEVEPVDRGATILVEHTPCGPETALTAFLYDKGSIDTTSKTDELAKQNSNSLEG DVAKIHEQLLNYSYASGEVEISLTRSEKRTKKLRSQHPIYVPFLGFLKSVSFKKKASKGW SSSSSSSSSLRRVLSTGGGLVEEERRERIDKYRSKRNQRNFDKKITYACRKTLADSRPRV KGRFARNSSDDAAAAAAAQVEVSPATNNNVPEWWPAVQEALARQEQEAAGLHLCDTADDD LLAAYLGVSSIDLYSPRGH

Transcript Sequence

Transcript ID	Os12t0101000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:37034:43021:1 gene:Os12g0101000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCT domain-containing gene 39, CCT (CO, CO-LIKE and TOC1) domain protein 39, CCT domain protein 39, CCT MOTIF FAMILY (CMF) gene 13 description:Similar to RNase P subunit p30 family protein, expressed. (Os12t0101000-01);Similar to RNase P subunit p30 family protein, expressed. (Os12t0101000-02);Similar to CCT motif family protein. (Os12t0101000-03)
Sequence	GATCTGCTATCTTTGGACGTTAATCCAGAACCTTCTTCCGACAAATATGAATTGCTATCT TACAAAGGAGAACCGCAATCTCTTGATATAAATCCAGAACCTTCTGCCAATAAAGATGAA CTACTGTATTTACCCATAAATGCTCTCACCGAAGCATCAAGTCATGTACCTTATGATGGT GATGAGTCCCTCTTTGTCGAGCAGCAAGAGCAGTTAAGCCATGGCAACGAAATCATATTC CCAGTTGAAACTCAAGAAGGGCCTGTGCAAGTTAGCAGAGGTGAAAGTCTTATGACTTGT GTATTGTCTACCTTGCCAGCATCTTGTGAGCAGCATAGTGTTGCTACCAATTTGGATAAT CCTGGAAACAATGAAACTGTTATGGCTCATGATGTGCAGACTGCTGCTGTCTCTTCCTTT GATCTGAAAGGCATTGAGAAACATGTTGAATCTCTGCATGATGCTATGGAACTAGATGGT ACAGAGTCAAGTAAAATGAACCTCATTGCAGATTTTACCGCTCCCTTATCTTCTGATGAT AGCTTGGTGTGTTATGCTATTCCATGTAGTATGGAACTTTCTGACACGAGTGTCGTGAAT AAGTGCCCTCACCAGTCTACTGGCTTCCCAGATTATGCTAAAGCTTGTACAGAATGTGAC TCTGGGTTGACCTCCTGTGAGAGGGTTGATAGGATATCACAGGATCATGACATTCTTTCT GGTTCCAGTATTTACTCTAAGAATAAGGACCTCTACTCTTACAGTGACATCTCAGTTTTT TCTGAGACTCACAAAGATTTTGCAGAACCGCTAGAGTTGCCTCCATGTGGGAAAGATGAT GAGGCGCCACCAGATCTTGCAGCTCAATTGCACTGTAATTCATGCAAGGATGTTATGATG CCACCGCAAGTTATAAGCGATGAAGTAGAGCCAGTTGACAGAGGAGCAACTATTTTAGTG GAACATACTCCCTGTGGTCCAGAGACTGCCTTGACTGCTTTTCTTTATGATAAAGGATCC ATTGATACAACCAGTAAAACTGATGAGTTGGCAAAGCAAAACTCAAACTCTCTGGAGGGA GATGTTGCTAAAATACATGAACAACTACTAAACTATTCTTATGCTAGTGGTGAGGTGGAG ATATCCCTAACTAGATCAGAAAAGCGAACCAAAAAATTAAGGTCGCAACATCCGATTTAT GTTCCTTTCTTGGGCTTCCTCAAGTCTGTGTCCTTTAAGAAGAAAGCATCCAAGGGCTGG AGCTCATCATCATCTTCGTCGTCGTCGCTCCGCCGGGTGTTGAGCACCGGAGGAGGCCTG GTGGAGGAGGAGCGGCGGGAGCGCATTGACAAGTACCGGAGCAAGCGCAATCAACGCAAT TTCGACAAGAAGATCACCTACGCTTGCCGGAAGACGCTCGCGGACAGCCGGCCGAGGGTG AAGGGCCGCTTCGCCCGTAACTCCTCCGACGACGCTGCTGCTGCTGCTGCAGCTCAAGTC GAGGTGTCGCCGGCGACGAATAATAATGTGCCGGAGTGGTGGCCGGCAGTGCAGGAGGCG CTGGCCAGGCAGGAGCAGGAGGCGGCTGGCCTCCATCTCTGCGACACCGCCGACGATGAC CTGCTAGCCGCCTACCTCGGCGTCTCCTCCATCGATCTCTACTCACCCCGCGGCCACTGA TCGATCCATTCAATCATCACTGCTACTCTGCTACCTACTCCTACCTCTTAAAACGGTTCA ATTTACTCTGCTATCTACTCCATAGATATTTTACCCCTGACTCGCAAAACGGTTCAATTT ACACCCTCAGTCAATATAGAGGTGGTTTAAGCC