Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0100500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:12686:14181:-1 gene:Os12g0100500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os12t0100500-01)
Sequence

ATGAGCAGCAGCAGCGGCGGCGATGGGGGTGGGTACAATTACTCGGAGGATTGGGTGGTG
AATTCGCGAGGGATGCGGCTCTTCACCTGCGCGTGGATTCCCAAGGAGAGCAGTAGAGGC
GTGGTTTGCCTGTGCCATGGGTACGCGGTGGAGTGCAGCGTGACGATGCGCGGCACGGCG
GAGCGGCTGGCCAGGGCGGGCTACGCCGTCCACGGCATCGACTACGAGGGCCACGGCCAC
TCCGACGGCCTCCAGGGCTACGTCCCCGACCTCGACGCCCTCGTCCGCGACTGCGACTCC
TTCTTCTCCACCGCCACCGCCTCCTTCCCCCGCCGCAGATTCCTCCTCGGCGAGTCCATG
GGCGGCGCCGTCGCCCTTCTTCTCCACCGCTTGCGCCCCGACTTCTGGACCGGCGCCATT
CTCGTCGCCCCCATGTGCAAGATCGCGGAGGAGATGCGGCCGCACCCGATGGTGGTGAGC
GTGCTGAAGGTGATGACAAGCATCATACCGACGTGGCGGGTGGTGCCGACGAATGACGTG
ATCGACCTGGCATACAGGATGCAGGGGAAGCGAGACGAGATCCGAGGGAACCCACTGTGC
TACAAGGGCAGGCCCCGCCTCAAGACCGCCTACGAGCTGCTCCGCGTCAGCATCCTCATC
GAGTCCACCATCCTCCCCCACGTCTCCCTCCCCTTCCTCATCCTCCACGGCGCCGCCGAC
CGGGTCACCGACCCCTCCGTCAGCGACCTCCTCTACCGCTCCGCCTCCACCACCGACAAG
ACCTTCCACCTCTACACCGGCATGTGGCACGCCCTCACCTCCGGCGAACTCCCTCACAAC
ATCGATGCCGTCTTCCGCGACATCATCGACTGGCTCCACCACAGGACATCCCCCACCTCC
GCTTCACATGTGCAGGACCACGACTTAAGTACGTCTTTCGAGGCGGAGCGCAAGGCCAAG
CACGACGACACCATCCATTGCGGCAAGCAAACATCATAG

Peptide Sequence

PEP ID

Os12t0100500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:12686:14181:-1 gene:Os12g0100500 transcript:Os12t0100500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os12t0100500-01)
Sequence

MSSSSGGDGGGYNYSEDWVVNSRGMRLFTCAWIPKESSRGVVCLCHGYAVECSVTMRGTA
ERLARAGYAVHGIDYEGHGHSDGLQGYVPDLDALVRDCDSFFSTATASFPRRRFLLGESM
GGAVALLLHRLRPDFWTGAILVAPMCKIAEEMRPHPMVVSVLKVMTSIIPTWRVVPTNDV
IDLAYRMQGKRDEIRGNPLCYKGRPRLKTAYELLRVSILIESTILPHVSLPFLILHGAAD
RVTDPSVSDLLYRSASTTDKTFHLYTGMWHALTSGELPHNIDAVFRDIIDWLHHRTSPTS
ASHVQDHDLSTSFEAERKAKHDDTIHCGKQTS

Transcript Sequence

Transcript ID

Os12t0100500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:12686:14181:-1 gene:Os12g0100500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase family protein. (Os12t0100500-01)
Sequence

AAGTTGCTAAGCCAGGTGCAGGTCCAGGTGGTGCCGTGGTGGTAGTAGCAGTAGTAGCCA
GGGCAGGAATATCTATCGATCGATGAGCAGCAGCAGCGGCGGCGATGGGGGTGGGTACAA
TTACTCGGAGGATTGGGTGGTGAATTCGCGAGGGATGCGGCTCTTCACCTGCGCGTGGAT
TCCCAAGGAGAGCAGTAGAGGCGTGGTTTGCCTGTGCCATGGGTACGCGGTGGAGTGCAG
CGTGACGATGCGCGGCACGGCGGAGCGGCTGGCCAGGGCGGGCTACGCCGTCCACGGCAT
CGACTACGAGGGCCACGGCCACTCCGACGGCCTCCAGGGCTACGTCCCCGACCTCGACGC
CCTCGTCCGCGACTGCGACTCCTTCTTCTCCACCGCCACCGCCTCCTTCCCCCGCCGCAG
ATTCCTCCTCGGCGAGTCCATGGGCGGCGCCGTCGCCCTTCTTCTCCACCGCTTGCGCCC
CGACTTCTGGACCGGCGCCATTCTCGTCGCCCCCATGTGCAAGATCGCGGAGGAGATGCG
GCCGCACCCGATGGTGGTGAGCGTGCTGAAGGTGATGACAAGCATCATACCGACGTGGCG
GGTGGTGCCGACGAATGACGTGATCGACCTGGCATACAGGATGCAGGGGAAGCGAGACGA
GATCCGAGGGAACCCACTGTGCTACAAGGGCAGGCCCCGCCTCAAGACCGCCTACGAGCT
GCTCCGCGTCAGCATCCTCATCGAGTCCACCATCCTCCCCCACGTCTCCCTCCCCTTCCT
CATCCTCCACGGCGCCGCCGACCGGGTCACCGACCCCTCCGTCAGCGACCTCCTCTACCG
CTCCGCCTCCACCACCGACAAGACCTTCCACCTCTACACCGGCATGTGGCACGCCCTCAC
CTCCGGCGAACTCCCTCACAACATCGATGCCGTCTTCCGCGACATCATCGACTGGCTCCA
CCACAGGACATCCCCCACCTCCGCTTCACATGTGCAGGACCACGACTTAAGTACGTCTTT
CGAGGCGGAGCGCAAGGCCAAGCACGACGACACCATCCATTGCGGCAAGCAAACATCATA
GTGATCACCTACCTACTATATAATATGGCTAGCTAGCTGCTATACTTACTAGCATGTATG
TCTTTACTATACTACATATATCCTTTTAAAAAAATATATAATGCTATTGACTTTTAGACT
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