Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0707700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:28957910:28960502:-1 gene:Os11g0707700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Elongin C (Fragment). (Os11t0707700-01)
Sequence

ATGCTGCGGAAGGGAGAGGCGCCGGGGCACCAAACCCCACCCCACCTGCACAAGGACGAC
GGCGACGACGACGACGACGCACCGTCCGGCTTCGTCAAGCTCATCAGCGCCGAGGGCTTC
GAGTTCGTCGTCGACAAGAAGGCCGCCATGGTCTCCAACACGCTCCGCAACATGCTCACC
TCCCCCGGCGGCTTCTCCGAGACGCGCGAGGGCGAGGTTAGGTTCCCCGAGATCAGCACC
CCCATCCTCGAGAAGATCTGCCAGTACTTCTACTGGTCGCTCCACTACTCCAGTGGGAAG
GAGACATCTGAGTTTCAAATTGAACCGGAGATAACTCTGGAGCTGATGATGGCTGCAAAC
TATCTGGACACCTGA

Peptide Sequence

PEP ID

Os11t0707700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:28957910:28960502:-1 gene:Os11g0707700 transcript:Os11t0707700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Elongin C (Fragment). (Os11t0707700-01)
Sequence

MLRKGEAPGHQTPPHLHKDDGDDDDDAPSGFVKLISAEGFEFVVDKKAAMVSNTLRNMLT
SPGGFSETREGEVRFPEISTPILEKICQYFYWSLHYSSGKETSEFQIEPEITLELMMAAN
YLDT

Transcript Sequence

Transcript ID

Os11t0707700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28957910:28960502:-1 gene:Os11g0707700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Elongin C (Fragment). (Os11t0707700-01)
Sequence

GATCTCCTCCTCCTCCTCCTGCGTGGCTGCGTCTCGCCTGGGACAAGAAGAAGAAGAAGA
AGAAGAATCGGAGGAAGAAGGGGGCAAGCTAGGATGCTGCGGAAGGGAGAGGCGCCGGGG
CACCAAACCCCACCCCACCTGCACAAGGACGACGGCGACGACGACGACGACGCACCGTCC
GGCTTCGTCAAGCTCATCAGCGCCGAGGGCTTCGAGTTCGTCGTCGACAAGAAGGCCGCC
ATGGTCTCCAACACGCTCCGCAACATGCTCACCTCCCCCGGCGGCTTCTCCGAGACGCGC
GAGGGCGAGGTTAGGTTCCCCGAGATCAGCACCCCCATCCTCGAGAAGATCTGCCAGTAC
TTCTACTGGTCGCTCCACTACTCCAGTGGGAAGGAGACATCTGAGTTTCAAATTGAACCG
GAGATAACTCTGGAGCTGATGATGGCTGCAAACTATCTGGACACCTGATGAGATGAGGTG
GAAGTGTTTTAGCAGGTTTTTTTTGTTGTTGATAAGGAAGCAATCCCTTGGTGTGCATCC
CCATTTGAGTGATGTAAACATTAGAGGATTGTAACTGTTGTGTTGTGTTGTAATATGATT
ATGTGGGTGCTTATGGAGGTATCCCTGAGACTTTGGATGGCAAAGGCCTTTTGTGTGCAC
AAACGGGTTTGTTACATTACAGGAATGGACATTCAAGTTGGGGGCCGGCTTGGT