Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0706200-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:28899015:28900796:1 gene:Os11g0706200 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os11t0706200-00)
Sequence	ATGGCCAACCCAGAGGATTTCTTTTGGGAGGCCCTCCTCAAGGAGAACGAAGCACCATCC CCACCACCTGTCTTCTTTGACCTCCCCGCAACACCCCTCTCCAACAGTGATGGCACAGAT CCCTCATCATTGGACAACCAACTTCTCTCCTACGTCTCTCGTATGCTCATGGAGGATGAG ATGGGTTCTTCTGCTGCTATCACCAACTTGCAGTGTGTCAACAGGGGCAGCACAGAGGAG GCCAACAATATGTTGCCGGGCAGTGAAGTGGTTAGGGTGTTCTCGAAGGGCATGGGAGAG GCCAGCAAGTTGTTGCCCAGAAACAACAGCTTCAGAACGCTGGAGACGGTGGATCAAGTA TCAAGTGATGGTCATTGTAGGGGACGAAAGAAGAAAAACCATGACAGGGACGAGCAGCAG CTGGAGGAGGAACTGGGGAGGACCAGTAAATTAGCTGCCTTGACGATTGCAGGGACACAG GAGGCTGGTGCTCGCGAGTTGCTGGACGAACTGATGCTGCACGCACACGAGACATGCATC AAAGACATGGAGAAGCTGCGTATCGACATGGACAATGAGGCAGAGAAGAAGATCAACAAG AAGGACAAGAAAGGCAGTAGTAGCAAGGTGGTGGACTTACGGTTGCTGCTGATCCAGTGT GCACAGGCCACGGCGACAGACAACCAGCAATCTGCAGGCGAGCTGCTGAAGAAGATCAAG CAGCACGCTTTGGCAACAGGCGACGCCATGCAGCGAGTGGCTCACTACTTCGCCAAGGGG CTTGAGGCACGGCTAGCTGGCAGAGGGAAGCATCTGTATCAGAATCAGATGCGCATGTCG TTGGTCGAGTACCTCAAGGTGTACAAGCTCTACATGGCAGCCTGCTGCTTCACGAAGGTG GCACTCATGTTTGCCGCCATGACAATCATGCAAGCTGTGCAAGGGAAGAAGAGGCTGCAC ATAGTTGATTACGGCCCGCGCTGTGGGCTGCACTGGCCAGACCTGCTCCGCCGGCTGGGA AGCAGGGAAGACGGGCCGCCGGAGGTGAGGATCACCATCGTTGACATCCTCCAGCCGGCG TTTCGTCCATTTCAGCGTATTGAGGAGGCTGGGCATTGCCTGAGCAGCTGTGCCAATGAG TTTCGTGTGCCATTCAGATTCCAAGCTGTTGCAGCAGCAAAGTGGGAGACAGTTGGTGCC GAGGACCTGCACATCGAGCCTGATGAGGTGCTTGTGGTGAATGACCTCTGGAGTTTCAGT GCTCTGATGGACGAGAGCGTCTTCTGCGACGGGCCAAACCCCAGGGATGTTGCCCTCCGT AACATCAGCAAGATGCAGCCAGACGTGTTCATCCAAGGCATCACCAATGATAGCTATGGT GCCTCCTTCCTGTCACGCTTCCGTGCAGTGCTCTTGTATTACTCGGCTCTGTTTGACATA CTGGACGCGACCACCCCAAGGGATAGTGGGCTGCGGCTGGCGCTGGAGCAGAACGTTCTG GGGCCTTACGCCCTCAACGCCATCGCCTGTGAGGGTGCAGACCTGGTGGAGCGCCCTGAG AAGTACAAACAGTGGCAGGCCAGGAACCACCGTGCAGGCATGCAGCAGCTGAAACTGAGA CCAGATATCGTTGATACAATCAGGGACGAGGTGAACAAGTACCATCACAAGGACTTTCTG CTGGGAGAGGACGGGCAGTGGCTGCTGCAGGGATGGATGGGACGAATCCTCTTTGCTCAC TCCGCATGGGTGCGCCAATCACAAGACACTTCCTCCGGATGA

Peptide Sequence

PEP ID	Os11t0706200-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:28899015:28900796:1 gene:Os11g0706200 transcript:Os11t0706200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os11t0706200-00)
Sequence	MANPEDFFWEALLKENEAPSPPPVFFDLPATPLSNSDGTDPSSLDNQLLSYVSRMLMEDE MGSSAAITNLQCVNRGSTEEANNMLPGSEVVRVFSKGMGEASKLLPRNNSFRTLETVDQV SSDGHCRGRKKKNHDRDEQQLEEELGRTSKLAALTIAGTQEAGARELLDELMLHAHETCI KDMEKLRIDMDNEAEKKINKKDKKGSSSKVVDLRLLLIQCAQATATDNQQSAGELLKKIK QHALATGDAMQRVAHYFAKGLEARLAGRGKHLYQNQMRMSLVEYLKVYKLYMAACCFTKV ALMFAAMTIMQAVQGKKRLHIVDYGPRCGLHWPDLLRRLGSREDGPPEVRITIVDILQPA FRPFQRIEEAGHCLSSCANEFRVPFRFQAVAAAKWETVGAEDLHIEPDEVLVVNDLWSFS ALMDESVFCDGPNPRDVALRNISKMQPDVFIQGITNDSYGASFLSRFRAVLLYYSALFDI LDATTPRDSGLRLALEQNVLGPYALNAIACEGADLVERPEKYKQWQARNHRAGMQQLKLR PDIVDTIRDEVNKYHHKDFLLGEDGQWLLQGWMGRILFAHSAWVRQSQDTSSG

Transcript Sequence

Transcript ID	Os11t0706200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:28899015:28900796:1 gene:Os11g0706200 gene_biotype:protein_coding transcript_biotype:protein_coding description:GRAS transcription factor domain containing protein. (Os11t0706200-00)
Sequence	ATGGCCAACCCAGAGGATTTCTTTTGGGAGGCCCTCCTCAAGGAGAACGAAGCACCATCC CCACCACCTGTCTTCTTTGACCTCCCCGCAACACCCCTCTCCAACAGTGATGGCACAGAT CCCTCATCATTGGACAACCAACTTCTCTCCTACGTCTCTCGTATGCTCATGGAGGATGAG ATGGGTTCTTCTGCTGCTATCACCAACTTGCAGTGTGTCAACAGGGGCAGCACAGAGGAG GCCAACAATATGTTGCCGGGCAGTGAAGTGGTTAGGGTGTTCTCGAAGGGCATGGGAGAG GCCAGCAAGTTGTTGCCCAGAAACAACAGCTTCAGAACGCTGGAGACGGTGGATCAAGTA TCAAGTGATGGTCATTGTAGGGGACGAAAGAAGAAAAACCATGACAGGGACGAGCAGCAG CTGGAGGAGGAACTGGGGAGGACCAGTAAATTAGCTGCCTTGACGATTGCAGGGACACAG GAGGCTGGTGCTCGCGAGTTGCTGGACGAACTGATGCTGCACGCACACGAGACATGCATC AAAGACATGGAGAAGCTGCGTATCGACATGGACAATGAGGCAGAGAAGAAGATCAACAAG AAGGACAAGAAAGGCAGTAGTAGCAAGGTGGTGGACTTACGGTTGCTGCTGATCCAGTGT GCACAGGCCACGGCGACAGACAACCAGCAATCTGCAGGCGAGCTGCTGAAGAAGATCAAG CAGCACGCTTTGGCAACAGGCGACGCCATGCAGCGAGTGGCTCACTACTTCGCCAAGGGG CTTGAGGCACGGCTAGCTGGCAGAGGGAAGCATCTGTATCAGAATCAGATGCGCATGTCG TTGGTCGAGTACCTCAAGGTGTACAAGCTCTACATGGCAGCCTGCTGCTTCACGAAGGTG GCACTCATGTTTGCCGCCATGACAATCATGCAAGCTGTGCAAGGGAAGAAGAGGCTGCAC ATAGTTGATTACGGCCCGCGCTGTGGGCTGCACTGGCCAGACCTGCTCCGCCGGCTGGGA AGCAGGGAAGACGGGCCGCCGGAGGTGAGGATCACCATCGTTGACATCCTCCAGCCGGCG TTTCGTCCATTTCAGCGTATTGAGGAGGCTGGGCATTGCCTGAGCAGCTGTGCCAATGAG TTTCGTGTGCCATTCAGATTCCAAGCTGTTGCAGCAGCAAAGTGGGAGACAGTTGGTGCC GAGGACCTGCACATCGAGCCTGATGAGGTGCTTGTGGTGAATGACCTCTGGAGTTTCAGT GCTCTGATGGACGAGAGCGTCTTCTGCGACGGGCCAAACCCCAGGGATGTTGCCCTCCGT AACATCAGCAAGATGCAGCCAGACGTGTTCATCCAAGGCATCACCAATGATAGCTATGGT GCCTCCTTCCTGTCACGCTTCCGTGCAGTGCTCTTGTATTACTCGGCTCTGTTTGACATA CTGGACGCGACCACCCCAAGGGATAGTGGGCTGCGGCTGGCGCTGGAGCAGAACGTTCTG GGGCCTTACGCCCTCAACGCCATCGCCTGTGAGGGTGCAGACCTGGTGGAGCGCCCTGAG AAGTACAAACAGTGGCAGGCCAGGAACCACCGTGCAGGCATGCAGCAGCTGAAACTGAGA CCAGATATCGTTGATACAATCAGGGACGAGGTGAACAAGTACCATCACAAGGACTTTCTG CTGGGAGAGGACGGGCAGTGGCTGCTGCAGGGATGGATGGGACGAATCCTCTTTGCTCAC TCCGCATGGGTGCGCCAATCACAAGACACTTCCTCCGGATGA