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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0704000-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:28809410:28811547:1 gene:Os11g0704000 gene_biotype:protein_coding transcript_biotype:protein_coding description:SelT/selW/selH selenoprotein family protein. (Os11t0704000-00)
Sequence

ATGCCTCCTAAGCGCAAGTCCCCGGCGGCCACCGCGGCGGTCGGGTCACCGAGGAAGACA
CGGAGCATGGCCGTCGGTAAGCAGCGCGCCGAGGCTCCGGCCAAGGCGGCCAAAAAGGAA
GCGGCGGCGGCGGCGGCACCACCCGAGCAGAAGGGGAGGAAGAGGGCCAAGAAAGAAGAT
GCACAAGTGGCGGCTGCGGCGGAGAAGGATTCCGGCGCTGTGGTCAGCGACGGGAAGCGC
ATCGTTGTGGAGGCATGCACTCAATGCAGACAGTTCAAGATTAGAGCTGCGAAGGTAAAG
GAGGATCTGGAAAGTTCTGTTCCTGGGGTATCCGTGGTAATCAACCCTGAAAAGCCACGA
CGTGGTTGCTTGGAGATTCGTGAGGAAGGTGGTGAAGTGTTCATATCGCTGCTGAACATG
CCACGACCTTTCACAGAAATGAAGAAACTTGACATGGATGAGGTCATCAAGGACATAGCA
AACAAAATCTCCTGA

Peptide Sequence

PEP ID

Os11t0704000-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:28809410:28811547:1 gene:Os11g0704000 transcript:Os11t0704000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:SelT/selW/selH selenoprotein family protein. (Os11t0704000-00)
Sequence

MPPKRKSPAATAAVGSPRKTRSMAVGKQRAEAPAKAAKKEAAAAAAPPEQKGRKRAKKED
AQVAAAAEKDSGAVVSDGKRIVVEACTQCRQFKIRAAKVKEDLESSVPGVSVVINPEKPR
RGCLEIREEGGEVFISLLNMPRPFTEMKKLDMDEVIKDIANKIS

Transcript Sequence

Transcript ID

Os11t0704000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28809410:28811547:1 gene:Os11g0704000 gene_biotype:protein_coding transcript_biotype:protein_coding description:SelT/selW/selH selenoprotein family protein. (Os11t0704000-00)
Sequence

GTCAAACCCACTCCCTCCCTTGGAGAACCAACCCACCGCACCCACTCTCGCTGCCGGCGA
TGCCTCCTAAGCGCAAGTCCCCGGCGGCCACCGCGGCGGTCGGGTCACCGAGGAAGACAC
GGAGCATGGCCGTCGGTAAGCAGCGCGCCGAGGCTCCGGCCAAGGCGGCCAAAAAGGAAG
CGGCGGCGGCGGCGGCACCACCCGAGCAGAAGGGGAGGAAGAGGGCCAAGAAAGAAGATG
CACAAGTGGCGGCTGCGGCGGAGAAGGATTCCGGCGCTGTGGTCAGCGACGGGAAGCGCA
TCGTTGTGGAGGCATGCACTCAATGCAGACAGTTCAAGATTAGAGCTGCGAAGGTAAAGG
AGGATCTGGAAAGTTCTGTTCCTGGGGTATCCGTGGTAATCAACCCTGAAAAGCCACGAC
GTGGTTGCTTGGAGATTCGTGAGGAAGGTGGTGAAGTGTTCATATCGCTGCTGAACATGC
CACGACCTTTCACAGAAATGAAGAAACTTGACATGGATGAGGTCATCAAGGACATAGCAA
ACAAAATCTCCTGAATCCAACCAGCAACTAATAGGGTGAAAATCTTTAGGTGGCTTACAA
CTAGTAGTAAGCCTCCAAACCCACCTTTCTGTTGGAGCTTCATCTTGAACTGTTATTGAA
TGGCAGTCCGTGTTGCATGCCCATGGTGTGTTGATTCAGTGGCCCTTTCTGTGCTCGATG
TATCTATAGACATGCCGAATTAATCGCAGTAGTAACAATGGAAAAGAACTGGTACCTGAT
GCGCCCCTGTGTTAACCTGCATACCACTCGTAATCTCTAAGATTCAATTCACTAC