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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0702400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:28766270:28766937:-1 gene:Os11g0702400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os11t0702400-01)
Sequence

ATGGAAGTGGCCACCAATACGGCGACACGATCGCCGGTGAAGCTAATGCTGGTGCTGACA
CTGTCGCCGGCGAGCAAGGTGATCGCCAAGGGCGGCGGCGGCGTGAAGCGGGTGCACCTC
GACGGCGGCGCGTTCCAGTGCCGGACATGCGGGCGGCGGTTCTCCACGTTCCAGGCTCTC
GGCGGCCACCGGACCAGCCACAAGCGGCCGCGGGTGCGCGCCGACGGCCTTGACCTCCTC
CTCGGCGCGCGCCCCGGCAAGCTCGGCGCCGGCGGCGCCTCGACGCCGGTAGTGCACCGG
TGCGACATGTGCGGCAAGGTGTTCGCCACCGGCCAGGCGCTCGGCGGCCACATGCGCCGC
CACCGGCCGCTGGTGAGTCGTAATGGCACAATGTCCACGACGTGGACGGCGGCGGCGGCG
GCGGCGGCGACAATGTCCGGCTCCTCGTCGGAAGAGCGTGACGACGACGACGACGACGAC
GTGCACAATTATAATTTCATCCACTTTTTGTGA

Peptide Sequence

PEP ID

Os11t0702400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:28766270:28766937:-1 gene:Os11g0702400 transcript:Os11t0702400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os11t0702400-01)
Sequence

MEVATNTATRSPVKLMLVLTLSPASKVIAKGGGGVKRVHLDGGAFQCRTCGRRFSTFQAL
GGHRTSHKRPRVRADGLDLLLGARPGKLGAGGASTPVVHRCDMCGKVFATGQALGGHMRR
HRPLVSRNGTMSTTWTAAAAAAATMSGSSSEERDDDDDDDVHNYNFIHFL

Transcript Sequence

Transcript ID

Os11t0702400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28766270:28766937:-1 gene:Os11g0702400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os11t0702400-01)
Sequence

ATTCGGTAGCTGGTTTGCTATTAACACTTTAATTTTGCATGCAGCAATTAAGGTGTTAAT
TAATATATATAATTAAGCTTTAAGCTCATTAGTTTACCGACGATGGAAGTGGCCACCAAT
ACGGCGACACGATCGCCGGTGAAGCTAATGCTGGTGCTGACACTGTCGCCGGCGAGCAAG
GTGATCGCCAAGGGCGGCGGCGGCGTGAAGCGGGTGCACCTCGACGGCGGCGCGTTCCAG
TGCCGGACATGCGGGCGGCGGTTCTCCACGTTCCAGGCTCTCGGCGGCCACCGGACCAGC
CACAAGCGGCCGCGGGTGCGCGCCGACGGCCTTGACCTCCTCCTCGGCGCGCGCCCCGGC
AAGCTCGGCGCCGGCGGCGCCTCGACGCCGGTAGTGCACCGGTGCGACATGTGCGGCAAG
GTGTTCGCCACCGGCCAGGCGCTCGGCGGCCACATGCGCCGCCACCGGCCGCTGGTGAGT
CGTAATGGCACAATGTCCACGACGTGGACGGCGGCGGCGGCGGCGGCGGCGACAATGTCC
GGCTCCTCGTCGGAAGAGCGTGACGACGACGACGACGACGACGTGCACAATTATAATTTC
ATCCACTTTTTGTGAGTGGCTAATGGACAAATCAATATATGAATTGAATAAAACCAGTGA
TTAATGTC