Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0702200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:28760411:28761600:-1 gene:Os11g0702200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 18 protein. (Os11t0702200-01)
Sequence

ATGTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTG
CTCCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGG
GGCCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACC
GTCGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGC
CACCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACC
GTCCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCG
CAGGACGTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCC
CGCCCGTTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGG
GGCCACTACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTG
CGCCTGACGGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATG
AAGACGCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGAC
TACAACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTC
CCGGCGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGAC
CCGCAGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGC
GTCATGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGAC
ATTGTCTAA

Peptide Sequence

PEP ID

Os11t0702200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:28760411:28761600:-1 gene:Os11g0702200 transcript:Os11t0702200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 18 protein. (Os11t0702200-01)
Sequence

MSKLQLRPPLLATLHCSLLVLLIINGAAAAGKTGELTVIWGRNKDEGSLRSTCDTGLYTT
VVISFLTVFGHGRYRTDLAGHPLAGVGADVKHCQKAKNVTVLLSIGGAGDQYSLPTAKSA
QDVAEHLWHAYLGGGRRGVSRPFGDAVLDGVDVYVDRGRWGHYDELARRLRSFGREKPAV
RLTASPACSLALFDDEVETMKTLSLFERLHVRFYNESSCDYNYFETRPFWGAWRTWTSRF
PAARVQVGWPAMEEMSGFVDPQTLRESVLSSVQDDANYGGVMLWDRYYDKITGFGRAIKD
IV

Transcript Sequence

Transcript ID

Os11t0702200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28760411:28761600:-1 gene:Os11g0702200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 18 protein. (Os11t0702200-01)
Sequence

GTGTACTGAATGAACTGAATTAGTGTGTGCGTGTTGTATCATCGGCCCGATCGAGAAGAT
GTCGAAGCTCCAACTCCGGCCGCCTCTGTTGGCTACTCTGCATTGCAGCTTGCTCGTGCT
CCTCATCATCAATGGCGCCGCCGCTGCCGGCAAGACCGGCGAGCTCACCGTCATCTGGGG
CCGGAACAAGGACGAGGGCTCATTGCGTTCGACCTGCGACACCGGCCTCTACACCACCGT
CGTCATCTCCTTCCTCACCGTCTTCGGCCACGGCCGCTACCGGACCGACCTCGCCGGCCA
CCCGCTCGCCGGCGTCGGCGCCGACGTCAAGCACTGCCAAAAGGCCAAGAACGTCACCGT
CCTCCTCTCCATCGGCGGCGCCGGCGACCAGTACTCGCTGCCCACCGCCAAGTCGGCGCA
GGACGTGGCCGAACACCTGTGGCACGCCTACCTCGGCGGCGGCCGCAGGGGCGTGTCCCG
CCCGTTCGGCGACGCCGTGCTCGACGGCGTCGACGTCTACGTCGACCGCGGCCGGTGGGG
CCACTACGACGAGCTCGCCAGGCGCCTGAGGAGCTTCGGTCGCGAGAAGCCGGCAGTGCG
CCTGACGGCGTCGCCGGCGTGCTCGCTGGCGCTGTTCGACGACGAGGTGGAGACGATGAA
GACGCTGTCGCTGTTCGAGCGGCTGCACGTGCGGTTCTACAACGAGAGCTCGTGCGACTA
CAACTACTTCGAGACGCGGCCGTTCTGGGGCGCGTGGAGGACGTGGACGTCGAGGTTCCC
GGCGGCGCGGGTGCAGGTGGGGTGGCCGGCGATGGAGGAGATGAGCGGGTTCGTGGACCC
GCAGACGCTGCGGGAGAGCGTGCTATCGTCGGTGCAGGACGATGCCAACTACGGCGGCGT
CATGCTCTGGGATCGCTACTACGACAAGATCACCGGATTCGGCCGTGCCATCAAAGACAT
TGTCTAATTGCAATGTTACTCCAGTGTTTATACTACATGGTTCACTGTGTTGTTTACCAA
CCTGCATTGCGTCATCTGTTACTATCTGTACCCGTCTACTGGCATATGCATGTTCGTATG
GGTCAGGCTTGAAAGTAGTATGATTATGTTAATTTAGTTTTGAAATATAAAAGAATCCAG
CATGTTTCACTGTGCTGTTTACCATAGTTGCATTGCATTATTGGTTGATT