Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0700500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:28703901:28705306:-1 gene:Os11g0700500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYBAS1 description:Similar to Snapdragon myb protein 305 homolog. (Os11t0700500-01)
Sequence

ATGGTGACAGTGAGAGAGGAGATGCGCAAGGGACCATGGACAGAGCAGGAGGACCTGCAA
CTGGTATGCACTGTCCGCCTGTTCGGTGACCGCCGTTGGGATTTCGTTGCCAAAGTATCA
GGGCTCAATAGGACAGGCAAGAGCTGCCGCCTCCGTTGGGTGAACTACCTCCACCCTGGC
CTCAAGCATGGGCGCATGTCACCAAAAGAGGAACATCTTATTATTGAGCTCCATGCTCGT
TGGGGTAACAGGTGGTCTAGGATAGCACGGAGGCTGCCAGGGCGCACAGACAATGAGATC
AAGAACTACTGGAGGACACACATGAGGAAGAAAGCCCAGGAGAGAAGGGGTGACATGTCA
CCCTCGTCCTCCTCGTCGTCACTGGTATACCAATCCTGCCTCCTAGATACTGTGCCAATC
ATCAGTATGGATGGAGGAGACATTCATGATGATCGCAGCTGCATGGCAAGAGTCCTCAAA
AGCACTCAGAGTGTCATGGATGGATATACCATGGATCAGATATGGAAAGAAATTGAGGCG
CCAGGGGCACCTTCCTTGCTGGGTATAGATGAAGGGAAAGACAAAGCATGCAGCAATCTC
CCATGTCCACTTCTGACATCTACCATGTCAGACTACAGCTGCCCTGAGGTATTCTGGAAG
ATTGACAATGAAGAAACAAGGATGTTGGCTACACAATCTGGTTATGGAAAATGA

Peptide Sequence

PEP ID

Os11t0700500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:28703901:28705306:-1 gene:Os11g0700500 transcript:Os11t0700500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYBAS1 description:Similar to Snapdragon myb protein 305 homolog. (Os11t0700500-01)
Sequence

MVTVREEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPG
LKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGDMS
PSSSSSSLVYQSCLLDTVPIISMDGGDIHDDRSCMARVLKSTQSVMDGYTMDQIWKEIEA
PGAPSLLGIDEGKDKACSNLPCPLLTSTMSDYSCPEVFWKIDNEETRMLATQSGYGK

Transcript Sequence

Transcript ID

Os11t0700500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28703901:28705306:-1 gene:Os11g0700500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYBAS1 description:Similar to Snapdragon myb protein 305 homolog. (Os11t0700500-01)
Sequence

AAGACAAAGTGGCTTCCTCTCTCCCTAATAGCAACCTTCCAGTTGGTCTGGAGTTGATCA
AGGCTCTAAACGTGAAGCTGGAGCCAACAAACTCAAAGAGGAAGAAGAACACGGAGAGTG
GCTCCCATCCTATCCAAGGTAGAAGTGAACAACGTTAGCATTGCAACATCCCAAGCCCCA
ATATGGTGACAGTGAGAGAGGAGATGCGCAAGGGACCATGGACAGAGCAGGAGGACCTGC
AACTGGTATGCACTGTCCGCCTGTTCGGTGACCGCCGTTGGGATTTCGTTGCCAAAGTAT
CAGGGCTCAATAGGACAGGCAAGAGCTGCCGCCTCCGTTGGGTGAACTACCTCCACCCTG
GCCTCAAGCATGGGCGCATGTCACCAAAAGAGGAACATCTTATTATTGAGCTCCATGCTC
GTTGGGGTAACAGGTGGTCTAGGATAGCACGGAGGCTGCCAGGGCGCACAGACAATGAGA
TCAAGAACTACTGGAGGACACACATGAGGAAGAAAGCCCAGGAGAGAAGGGGTGACATGT
CACCCTCGTCCTCCTCGTCGTCACTGGTATACCAATCCTGCCTCCTAGATACTGTGCCAA
TCATCAGTATGGATGGAGGAGACATTCATGATGATCGCAGCTGCATGGCAAGAGTCCTCA
AAAGCACTCAGAGTGTCATGGATGGATATACCATGGATCAGATATGGAAAGAAATTGAGG
CGCCAGGGGCACCTTCCTTGCTGGGTATAGATGAAGGGAAAGACAAAGCATGCAGCAATC
TCCCATGTCCACTTCTGACATCTACCATGTCAGACTACAGCTGCCCTGAGGTATTCTGGA
AGATTGACAATGAAGAAACAAGGATGTTGGCTACACAATCTGGTTATGGAAAATGAGGGC
CATGCTATTGAAGGATAAAGCCATACATCAAGATATAGGCCAGGTTTCTAAGCTACATAT
GTGCTTTCCAGATTTGCAGTACTTATGTGGTTATATTTGTGTTACTATGGGTCTCAATAT
TTACAGATCTACTATAACATTATTGGTGTGCTCATGATGTATGTATTATGTATGTATGTA
TGTAGAATCTAATGTGCAACATAGCTTGTGTGACTTACCTTTGACAGTATGGAACACAAT
ACCACTTTGTATGAATGGTATAGTTTATTGATCAAGTAACAGATTATAAGGTTAAAAAT