Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0695900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:28462112:28469811:-1 gene:Os11g0695900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os11t0695900-01)
Sequence

ATGGAGGTCGAAGCCCAGACCTCGGCCGCCGCGGCGGCGGCCGGCGACGAGCTCCGGTCG
CTCCTCTCCGCCACCCTGAGCCCCGACAAGGCGGCGGTGGACGCCGCCACGGAAGGGCTC
TCCAGGATCGCCGCCGCCTCCGACCCCCGCTTCCCCATCTCCCTCCTCGCCGTCGCCGCA
GCTGATGGGGACCAAGGAACAAAAGTTGCTGCAGCAACATACTTGAAGAATTACACACGC
CGAAATATTGACTGGGGGTTGTCATCACCTGAGCTTTATAAAGAGTTCCGTGATCGGCTC
GCCCAGGCGTTGCTTCAAGTGGAACCTTTCCTTCTTCGAGTATTGATTGAAGTTTTCCGC
CAAGTCATAGAAAAAGATTTTGTCAAGGAAAATTTGTGGCCTGAACTTGTCCCCCAGTTG
AAGCAAGTGATCCACAGCAGCAATATAATAAGTCCAGGCCAGCATCCTGAATGGAATACT
ATCAACGCACTCAGAGTACTTCAATCTGTTGTTAGGCCCTTCCAGTACTTCTTGAACCCC
AAAGTAGCAAAAGAGCCTGTTCCACCACAATTGGAGCAAATCGCATCTGAGATTCTTGTA
CCACTACAAGTGACATTCCATCACATTGCTGACAAGGTTCTGTTGTCACGAGATGAGACT
AATCTGGAATACGAGCAACTCCTACTCATCACGAGCAAGTGCATGTATTTCACTGTTAGG
TCATACATGCCATCTAGGGTAAAGCAGATTTTGCCTTCCTTTTGCAAAGACATGTTCCGC
ATACTAGAATCACTGGATTTCAACAGTCAATATGAAGATGGAGCTACAACAAGGCTCAAG
ACTGCAAAGAGATGCCTCATCATACTTTGCACACTTGTTACTCGTCACCGGAAACATGCT
GACGACCAGATGGCACATATTGTCAACAGCGCAACCAGAATATCAAGTCAAAGCATTCAT
TTACATAAACTCGACCCTCTCTCTGATCAGATCATTTCATTGTCATTTGATGTAATTTCT
CGTGTTCTGGAGACAGGCCCTGGATGGCGACTTGTTTCACCACATTTTTCTTCACTTCTG
GATTCAGCAATTTTTCCAGCTTTAGCATTAAACGGAAAGGATATAACAGAGTGGGAAGAC
GATACTGATGAGTACATGCGGAAAAATCTACCTTGTGAACTTGACGACATTTCAGGATGG
GCTGAGGATTTATTCACAGCAAGAAAAAGTGCTATCAATTTACTTGGTGTTATAGCCCTA
TCGAAGGGCCCACCAGTTGTATCTGCAGCTTCTAAGCGTAAGAAAGGTGATAAAAGTAAA
GGAAAAGGAGAAAGGAGCTCCATTGGGGAGTTATTGGTTATACCATTCCTGTCAAAATTT
CCTATACCTCCCCAAGGGGAAGATGTGTCATCAAAGGCAGTGCAGAATTATTTCGGTGTT
CTAATGGCATTTGGGGGCCTCCAAGATTTTCTGACTGAGAAGAAAGATCTGACAAATACA
ATCATTAGGAATCGTATTCTTCCACTGTATTCCCTGGATCCATGCAGTCCATATTTGATT
TCTGCAGCAAACTGGATTATTGGACAGCTTGCGTTGTGCCTACCAGAGGCCATGAGCACA
AATATTTATCATTCATTAATGAAGGCATTGACGATGGAGGATTTTGATGAGTTGAGCTGT
TATCCTGTCCGTGCTTCTGCTTCTGGTGCCATTACAGAACTCATTGAGAATGGTTATGCT
CCTCCTGATTGGCTTGTCCTTTTACAAGTGGTGATGAAAAGGATAAGCGTTGAAGATGAA
AATGAGTCTACTCTTTTGTTTCAGCTTCTGGGCACAATAATCGAGTCTGGCCAAGAAAAA
GTTATGCCTCACATTCCTGAAATTGTATCTAACATAGCCAATACCATAATGAAGCTATTG
CCCCCTGTGCCAGATCCCTGGCCTCAGGCTGTTGAACGGGGTTTTGCTGCACTGGTATCG
ATGGCTCAAGCTTGGGAAAGCTCTGCACCAGATGAAAACAAGGACATTGAAATGAGGGTC
TGGCAGTCAGGCCAGTTTGCTATGGCCCAAACATTTTCGCATGTGTTACAAAAGGCTTGG
TTGCTACCAGTTGAGCAAATGGGGTTATCTGTTTGCTCTTCATTGCCACCTCTGTCGTGT
GTAAATGATGCTTCTATTTTACTTGAGTTCATTATGAGGTCTATCACCTCTATGGAAGAA
ACTGCAAGTATGAAGGTGTTTGAGCTAGTAGCTATATGGGCTGACATAATTGCTTGTTGG
GATTCTTGGGAGGAAATGGAGGATCAGGGAATTTTCAATACAATCAAAGAAGCTGTTAAC
TTCCATCAAAACTTTGATTCTAATGGTTTCTTCCTGAAAATACTCCCTTCCCGATCTGAA
AATAGTTCACAAAGTTCAGTCATAAGTTGGGTTTCTAGTTTTATAACCAGGGCCATTGAA
GCTTACCCATCTGCAACATGGAGGGCATGTTCATGCATGCATACACTGCTGCACACTCCT
AATTTCTCTCATGGAGCAGAAGATACTAGAATGACTCTTGCTGTATCCTTTGCGCAAGCA
GCATTCTCCCGTTTCAAGTCTGTATCTGACAGCCCTTCTGGGATATGGAAACCACTAATA
CTAGTCATTTCGTCATGCTACATATGCTACCCTGATGCTATTGAGCAAGTCTTACGCAAA
TATGACAGTAACGGTTATGCGATATGGGCATCTGCATTAGCACAAATCTCAAGTAGCTCT
TTCAATCCTGGCTTGTCATCTGAATCCGAGATCAAACTAGCTGTGTTAACGTTAGCAACT
GTGATTGAGCATCTTTTGGCCCTTTCTATGGGTGGCACCAAACTATTGCATGATTGCTGT
GTATCATTGATGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAGGATGGGGATGATGGT
GATGGTGCAGAAGATCTTGATGATGATGATGATGATGAAGAGGAGGAAGACACCGATGAA
GATGATGAGGATTATAATCAGGATTCGGATGATGATGATGTACGAGAAGAGACAGAAGAG
GAATTTCTTCAAAGATATGCAGCGGCTGCCGGTGGTGAATCAATTGAAATTGTTGAGGAC
GGTGACATTGATGATGAAACCCAAGACATTGAATTGGGTTCCCTGGATGAAATGGATGTA
CAGCAGGTGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATTCGCGCTCAAACATTT
CCGGATGGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATATGAACAGCTGTTCCAT
GTTCATCGGCAAGCCTAG

Peptide Sequence

PEP ID

Os11t0695900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:28462112:28469811:-1 gene:Os11g0695900 transcript:Os11t0695900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os11t0695900-01)
Sequence

MEVEAQTSAAAAAAGDELRSLLSATLSPDKAAVDAATEGLSRIAAASDPRFPISLLAVAA
ADGDQGTKVAAATYLKNYTRRNIDWGLSSPELYKEFRDRLAQALLQVEPFLLRVLIEVFR
QVIEKDFVKENLWPELVPQLKQVIHSSNIISPGQHPEWNTINALRVLQSVVRPFQYFLNP
KVAKEPVPPQLEQIASEILVPLQVTFHHIADKVLLSRDETNLEYEQLLLITSKCMYFTVR
SYMPSRVKQILPSFCKDMFRILESLDFNSQYEDGATTRLKTAKRCLIILCTLVTRHRKHA
DDQMAHIVNSATRISSQSIHLHKLDPLSDQIISLSFDVISRVLETGPGWRLVSPHFSSLL
DSAIFPALALNGKDITEWEDDTDEYMRKNLPCELDDISGWAEDLFTARKSAINLLGVIAL
SKGPPVVSAASKRKKGDKSKGKGERSSIGELLVIPFLSKFPIPPQGEDVSSKAVQNYFGV
LMAFGGLQDFLTEKKDLTNTIIRNRILPLYSLDPCSPYLISAANWIIGQLALCLPEAMST
NIYHSLMKALTMEDFDELSCYPVRASASGAITELIENGYAPPDWLVLLQVVMKRISVEDE
NESTLLFQLLGTIIESGQEKVMPHIPEIVSNIANTIMKLLPPVPDPWPQAVERGFAALVS
MAQAWESSAPDENKDIEMRVWQSGQFAMAQTFSHVLQKAWLLPVEQMGLSVCSSLPPLSC
VNDASILLEFIMRSITSMEETASMKVFELVAIWADIIACWDSWEEMEDQGIFNTIKEAVN
FHQNFDSNGFFLKILPSRSENSSQSSVISWVSSFITRAIEAYPSATWRACSCMHTLLHTP
NFSHGAEDTRMTLAVSFAQAAFSRFKSVSDSPSGIWKPLILVISSCYICYPDAIEQVLRK
YDSNGYAIWASALAQISSSSFNPGLSSESEIKLAVLTLATVIEHLLALSMGGTKLLHDCC
VSLMESCIHLKEVQEDGDDGDGAEDLDDDDDDEEEEDTDEDDEDYNQDSDDDDVREETEE
EFLQRYAAAAGGESIEIVEDGDIDDETQDIELGSLDEMDVQQVVLSMMKIRPDLIRAQTF
PDGLMERMAETFPEYEQLFHVHRQA

Transcript Sequence

Transcript ID

Os11t0695900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28462112:28469811:-1 gene:Os11g0695900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os11t0695900-01)
Sequence

ATTCTCTCTGGAGTCTTGCTGGTCAAAAAATATCCTCAAAAAAGGAAAAGAAAAAAGAAC
TAGGGTTTACGCTCCATGGAGGTCGAAGCCCAGACCTCGGCCGCCGCGGCGGCGGCCGGC
GACGAGCTCCGGTCGCTCCTCTCCGCCACCCTGAGCCCCGACAAGGCGGCGGTGGACGCC
GCCACGGAAGGGCTCTCCAGGATCGCCGCCGCCTCCGACCCCCGCTTCCCCATCTCCCTC
CTCGCCGTCGCCGCAGCTGATGGGGACCAAGGAACAAAAGTTGCTGCAGCAACATACTTG
AAGAATTACACACGCCGAAATATTGACTGGGGGTTGTCATCACCTGAGCTTTATAAAGAG
TTCCGTGATCGGCTCGCCCAGGCGTTGCTTCAAGTGGAACCTTTCCTTCTTCGAGTATTG
ATTGAAGTTTTCCGCCAAGTCATAGAAAAAGATTTTGTCAAGGAAAATTTGTGGCCTGAA
CTTGTCCCCCAGTTGAAGCAAGTGATCCACAGCAGCAATATAATAAGTCCAGGCCAGCAT
CCTGAATGGAATACTATCAACGCACTCAGAGTACTTCAATCTGTTGTTAGGCCCTTCCAG
TACTTCTTGAACCCCAAAGTAGCAAAAGAGCCTGTTCCACCACAATTGGAGCAAATCGCA
TCTGAGATTCTTGTACCACTACAAGTGACATTCCATCACATTGCTGACAAGGTTCTGTTG
TCACGAGATGAGACTAATCTGGAATACGAGCAACTCCTACTCATCACGAGCAAGTGCATG
TATTTCACTGTTAGGTCATACATGCCATCTAGGGTAAAGCAGATTTTGCCTTCCTTTTGC
AAAGACATGTTCCGCATACTAGAATCACTGGATTTCAACAGTCAATATGAAGATGGAGCT
ACAACAAGGCTCAAGACTGCAAAGAGATGCCTCATCATACTTTGCACACTTGTTACTCGT
CACCGGAAACATGCTGACGACCAGATGGCACATATTGTCAACAGCGCAACCAGAATATCA
AGTCAAAGCATTCATTTACATAAACTCGACCCTCTCTCTGATCAGATCATTTCATTGTCA
TTTGATGTAATTTCTCGTGTTCTGGAGACAGGCCCTGGATGGCGACTTGTTTCACCACAT
TTTTCTTCACTTCTGGATTCAGCAATTTTTCCAGCTTTAGCATTAAACGGAAAGGATATA
ACAGAGTGGGAAGACGATACTGATGAGTACATGCGGAAAAATCTACCTTGTGAACTTGAC
GACATTTCAGGATGGGCTGAGGATTTATTCACAGCAAGAAAAAGTGCTATCAATTTACTT
GGTGTTATAGCCCTATCGAAGGGCCCACCAGTTGTATCTGCAGCTTCTAAGCGTAAGAAA
GGTGATAAAAGTAAAGGAAAAGGAGAAAGGAGCTCCATTGGGGAGTTATTGGTTATACCA
TTCCTGTCAAAATTTCCTATACCTCCCCAAGGGGAAGATGTGTCATCAAAGGCAGTGCAG
AATTATTTCGGTGTTCTAATGGCATTTGGGGGCCTCCAAGATTTTCTGACTGAGAAGAAA
GATCTGACAAATACAATCATTAGGAATCGTATTCTTCCACTGTATTCCCTGGATCCATGC
AGTCCATATTTGATTTCTGCAGCAAACTGGATTATTGGACAGCTTGCGTTGTGCCTACCA
GAGGCCATGAGCACAAATATTTATCATTCATTAATGAAGGCATTGACGATGGAGGATTTT
GATGAGTTGAGCTGTTATCCTGTCCGTGCTTCTGCTTCTGGTGCCATTACAGAACTCATT
GAGAATGGTTATGCTCCTCCTGATTGGCTTGTCCTTTTACAAGTGGTGATGAAAAGGATA
AGCGTTGAAGATGAAAATGAGTCTACTCTTTTGTTTCAGCTTCTGGGCACAATAATCGAG
TCTGGCCAAGAAAAAGTTATGCCTCACATTCCTGAAATTGTATCTAACATAGCCAATACC
ATAATGAAGCTATTGCCCCCTGTGCCAGATCCCTGGCCTCAGGCTGTTGAACGGGGTTTT
GCTGCACTGGTATCGATGGCTCAAGCTTGGGAAAGCTCTGCACCAGATGAAAACAAGGAC
ATTGAAATGAGGGTCTGGCAGTCAGGCCAGTTTGCTATGGCCCAAACATTTTCGCATGTG
TTACAAAAGGCTTGGTTGCTACCAGTTGAGCAAATGGGGTTATCTGTTTGCTCTTCATTG
CCACCTCTGTCGTGTGTAAATGATGCTTCTATTTTACTTGAGTTCATTATGAGGTCTATC
ACCTCTATGGAAGAAACTGCAAGTATGAAGGTGTTTGAGCTAGTAGCTATATGGGCTGAC
ATAATTGCTTGTTGGGATTCTTGGGAGGAAATGGAGGATCAGGGAATTTTCAATACAATC
AAAGAAGCTGTTAACTTCCATCAAAACTTTGATTCTAATGGTTTCTTCCTGAAAATACTC
CCTTCCCGATCTGAAAATAGTTCACAAAGTTCAGTCATAAGTTGGGTTTCTAGTTTTATA
ACCAGGGCCATTGAAGCTTACCCATCTGCAACATGGAGGGCATGTTCATGCATGCATACA
CTGCTGCACACTCCTAATTTCTCTCATGGAGCAGAAGATACTAGAATGACTCTTGCTGTA
TCCTTTGCGCAAGCAGCATTCTCCCGTTTCAAGTCTGTATCTGACAGCCCTTCTGGGATA
TGGAAACCACTAATACTAGTCATTTCGTCATGCTACATATGCTACCCTGATGCTATTGAG
CAAGTCTTACGCAAATATGACAGTAACGGTTATGCGATATGGGCATCTGCATTAGCACAA
ATCTCAAGTAGCTCTTTCAATCCTGGCTTGTCATCTGAATCCGAGATCAAACTAGCTGTG
TTAACGTTAGCAACTGTGATTGAGCATCTTTTGGCCCTTTCTATGGGTGGCACCAAACTA
TTGCATGATTGCTGTGTATCATTGATGGAGTCTTGCATCCATCTGAAGGAAGTTCAAGAG
GATGGGGATGATGGTGATGGTGCAGAAGATCTTGATGATGATGATGATGATGAAGAGGAG
GAAGACACCGATGAAGATGATGAGGATTATAATCAGGATTCGGATGATGATGATGTACGA
GAAGAGACAGAAGAGGAATTTCTTCAAAGATATGCAGCGGCTGCCGGTGGTGAATCAATT
GAAATTGTTGAGGACGGTGACATTGATGATGAAACCCAAGACATTGAATTGGGTTCCCTG
GATGAAATGGATGTACAGCAGGTGGTTCTTTCGATGATGAAGATTCGTCCTGATCTCATT
CGCGCTCAAACATTTCCGGATGGCCTAATGGAGAGAATGGCAGAAACGTTTCCTGAATAT
GAACAGCTGTTCCATGTTCATCGGCAAGCCTAGGCGATACCACAATAGACTAGTGTGCAG
CCTTGTTATTTATTGTTTCTAGTTTCTTTTTTTTTTAAACTTGTCCGTGTGTTTATATAT
TTGTATGGAATGGTGGGCCGATTATTGTTGATGGTTGTGGCGATTATTTTGTGATTTGGA
TCGGACTAATCTGCCGGACATGATGTTTTAAGGAGTTCAAGGGC