Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0690066-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:28058331:28063814:1 gene:Os11g0690066 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os11t0690066-00)
Sequence

ATGTACTGCACACCACACGCAGTACAGTACTCCTACATGGCTAAAAACGTTATGCAGCTC
GCAATACTATCCACGCAACGAGTAGTATTGCTGCTGTGGCTTCTCCATGCCCCTGCTGCG
GCAGACGCAGCACTGACTACGGTGGCGGGGTGCCCGAGCAAGTGCGGCGACGTGGACATC
CCCTTGCCGTTCGGCATCGGCGACCACTGCGCCTGGGAGAGCTTCGACGTCGTCTGCAAC
GAAAGCTTTAGCCCTCCCAGACCGCACACGGGGAACATAGAGATCAAGGAAATCTCGGTG
GAGGCGGGGGAGATGCGCGTGTACACTCCCGTGGCCGACCAGTGCTACAACTCATCATCC
ACCAGCGCCCCCGGCTTCGGCGCCTCCTTGGAGCTCACAGCTCCGTTCTTGCTCGCCCAG
AGCAACGAGTTCACGGCCATCGGCTGCAACACGGTGGCGTTCCTAGATGGCAGGAACAAC
GGGAGCTACTCGACCGGCTGCATCACGACGTGTGGGAGCGTGGAGGCTGCTGCCCAAAAC
GGCGAGCCATGCACGGGGCTGGGTTGCTGCCAGGTTCCCTCCATCCCGCCCAACCTTACC
ACCTTACATATTTCGTGGAACGACCAGGGCTTCCTCAACTTTACGCCCATCGGCACCCCT
TGTAGCTACGCCTTCGTGGCCCAGAAAGACTGGTACAATTTCAGCCGGCAAGATTTCGGT
CCTGTCGGCAGCAAGGACTTCATCACCAACAGTACTTGGGATAAAAGTGTCCCCACGGTG
CTTAATTGGGCAATCAGGAACAATGGATCGTGCTCATCAATTACAGGGCTAGCTCCTGCC
TGTGTCAGCGCCAACAGCAACTGTGTCAACACCAGTAATGGAGTGGGATACCTCTGCAAA
TGCTCCCCGGGATACGCCGGGAATCCCTATGCCACTGGCGCTGACGGATGCACAAATATC
AATGAATGTGATCTTAGAAGAGCAGAGCCTGCCAAATACGAGAAACTCTATCCTTGTTAC
AGTGGTAGCAAGTGCCATGACACAGAGGGTGATTACAAATGCAAATGCCGGTTTTGGCAT
AGAGGGGATGGTAAACTCGACAAGGGATGCCGGGCCATAATTCCCTGGACTGCAGTTGCG
GCAGTAGCAACACTTTTGGCCAGTGCTTTTCTGGCAGCCCTGCTGCTATACATTCGCAGG
GAGCGTAAGAGGCGGCAACGGAAAGGATTATTCGACAAAAATGGTGGCAACATACTACGG
AATGTATTGAACATCAAAATCTACAGCGAAGATGAGCTGAATAAGATGACCACAAACTAC
AGCAATATGCTTGGAAACGGTTGCTTCGGCGGGGTATACAAAGGGATCACCGACGAGAAG
CAAGAGGTTGCTGTGAAGCGCTTCAACCCACGAGACGAGGAACGCAGCAGAGATGACGTG
GTACGAGAGATAACCAGCCAGTCCTCTATCCAGCACGACAATCTTCTCCGCCTCGTTGGG
TGTTGCCTAGAGACGGATGTCCCTAGGTTGGTCTTGGAGTTCATCCCCAATGGAAGCCTC
CATACTGTGCTCCACGGTGCTGGCCGGAATATGCATATCCCTCTATTGGCTCGCTTAGAC
ATCGCCGTTGGCAGTGCAGAAGCTCTGGCGTACATGCACTCCAACATTGGCCACAACAGC
ATCGTTCATGGTGATGTCAAGTCCGCTAACATTCTTATTGGCGACAACATGGAGCCCAAG
GTATCTGATTTTGGGGCATCCAAGCTCATGTCTGTCGCGAAGTACAACAAGTGGTCCGTC
TTTGGGGATTTGAACTACATCGACCCCGTGTACACGAGCACAGGAGATTTCACGGATAAG
AGCGACGTCTATAGCTTCGGTGTTGTGCTCCTAGAGCTCATCACCCGGAGGAAGGCCAAG
TACGATGGGACAAGCCTCCGGGTACAATTTGATAAACATTACAAGGATGATGACATGAGG
AGAAAGATGTATGATCAGGATTTGTTGTCTGACGATGCCCAACCTCACTGCTTGGAGTGC
CTCGACAAGATGGCAGACATCGCGGTTCAATGCCTAAGAAACAACGTCGATGAGAGGCCA
ACCATGGCAGAGGTACTGGAGGATCTTAAGAAGTTGAGAGAAAGCGCAAAAACTCACAAC
ACATATCCAACTCGTGTAGACGGTGAAGGGAAGCCTGATCGTTAA

Peptide Sequence

PEP ID

Os11t0690066-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:28058331:28063814:1 gene:Os11g0690066 transcript:Os11t0690066-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os11t0690066-00)
Sequence

MYCTPHAVQYSYMAKNVMQLAILSTQRVVLLLWLLHAPAAADAALTTVAGCPSKCGDVDI
PLPFGIGDHCAWESFDVVCNESFSPPRPHTGNIEIKEISVEAGEMRVYTPVADQCYNSSS
TSAPGFGASLELTAPFLLAQSNEFTAIGCNTVAFLDGRNNGSYSTGCITTCGSVEAAAQN
GEPCTGLGCCQVPSIPPNLTTLHISWNDQGFLNFTPIGTPCSYAFVAQKDWYNFSRQDFG
PVGSKDFITNSTWDKSVPTVLNWAIRNNGSCSSITGLAPACVSANSNCVNTSNGVGYLCK
CSPGYAGNPYATGADGCTNINECDLRRAEPAKYEKLYPCYSGSKCHDTEGDYKCKCRFWH
RGDGKLDKGCRAIIPWTAVAAVATLLASAFLAALLLYIRRERKRRQRKGLFDKNGGNILR
NVLNIKIYSEDELNKMTTNYSNMLGNGCFGGVYKGITDEKQEVAVKRFNPRDEERSRDDV
VREITSQSSIQHDNLLRLVGCCLETDVPRLVLEFIPNGSLHTVLHGAGRNMHIPLLARLD
IAVGSAEALAYMHSNIGHNSIVHGDVKSANILIGDNMEPKVSDFGASKLMSVAKYNKWSV
FGDLNYIDPVYTSTGDFTDKSDVYSFGVVLLELITRRKAKYDGTSLRVQFDKHYKDDDMR
RKMYDQDLLSDDAQPHCLECLDKMADIAVQCLRNNVDERPTMAEVLEDLKKLRESAKTHN
TYPTRVDGEGKPDR

Transcript Sequence

Transcript ID

Os11t0690066-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:28058331:28063814:1 gene:Os11g0690066 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase domain containing protein. (Os11t0690066-00)
Sequence

AAGAAATGTACTGCACACCACACGCAGTACAGTACTCCTACATGGCTAAAAACGTTATGC
AGCTCGCAATACTATCCACGCAACGAGTAGTATTGCTGCTGTGGCTTCTCCATGCCCCTG
CTGCGGCAGACGCAGCACTGACTACGGTGGCGGGGTGCCCGAGCAAGTGCGGCGACGTGG
ACATCCCCTTGCCGTTCGGCATCGGCGACCACTGCGCCTGGGAGAGCTTCGACGTCGTCT
GCAACGAAAGCTTTAGCCCTCCCAGACCGCACACGGGGAACATAGAGATCAAGGAAATCT
CGGTGGAGGCGGGGGAGATGCGCGTGTACACTCCCGTGGCCGACCAGTGCTACAACTCAT
CATCCACCAGCGCCCCCGGCTTCGGCGCCTCCTTGGAGCTCACAGCTCCGTTCTTGCTCG
CCCAGAGCAACGAGTTCACGGCCATCGGCTGCAACACGGTGGCGTTCCTAGATGGCAGGA
ACAACGGGAGCTACTCGACCGGCTGCATCACGACGTGTGGGAGCGTGGAGGCTGCTGCCC
AAAACGGCGAGCCATGCACGGGGCTGGGTTGCTGCCAGGTTCCCTCCATCCCGCCCAACC
TTACCACCTTACATATTTCGTGGAACGACCAGGGCTTCCTCAACTTTACGCCCATCGGCA
CCCCTTGTAGCTACGCCTTCGTGGCCCAGAAAGACTGGTACAATTTCAGCCGGCAAGATT
TCGGTCCTGTCGGCAGCAAGGACTTCATCACCAACAGTACTTGGGATAAAAGTGTCCCCA
CGGTGCTTAATTGGGCAATCAGGAACAATGGATCGTGCTCATCAATTACAGGGCTAGCTC
CTGCCTGTGTCAGCGCCAACAGCAACTGTGTCAACACCAGTAATGGAGTGGGATACCTCT
GCAAATGCTCCCCGGGATACGCCGGGAATCCCTATGCCACTGGCGCTGACGGATGCACAA
ATATCAATGAATGTGATCTTAGAAGAGCAGAGCCTGCCAAATACGAGAAACTCTATCCTT
GTTACAGTGGTAGCAAGTGCCATGACACAGAGGGTGATTACAAATGCAAATGCCGGTTTT
GGCATAGAGGGGATGGTAAACTCGACAAGGGATGCCGGGCCATAATTCCCTGGACTGCAG
TTGCGGCAGTAGCAACACTTTTGGCCAGTGCTTTTCTGGCAGCCCTGCTGCTATACATTC
GCAGGGAGCGTAAGAGGCGGCAACGGAAAGGATTATTCGACAAAAATGGTGGCAACATAC
TACGGAATGTATTGAACATCAAAATCTACAGCGAAGATGAGCTGAATAAGATGACCACAA
ACTACAGCAATATGCTTGGAAACGGTTGCTTCGGCGGGGTATACAAAGGGATCACCGACG
AGAAGCAAGAGGTTGCTGTGAAGCGCTTCAACCCACGAGACGAGGAACGCAGCAGAGATG
ACGTGGTACGAGAGATAACCAGCCAGTCCTCTATCCAGCACGACAATCTTCTCCGCCTCG
TTGGGTGTTGCCTAGAGACGGATGTCCCTAGGTTGGTCTTGGAGTTCATCCCCAATGGAA
GCCTCCATACTGTGCTCCACGGTGCTGGCCGGAATATGCATATCCCTCTATTGGCTCGCT
TAGACATCGCCGTTGGCAGTGCAGAAGCTCTGGCGTACATGCACTCCAACATTGGCCACA
ACAGCATCGTTCATGGTGATGTCAAGTCCGCTAACATTCTTATTGGCGACAACATGGAGC
CCAAGGTATCTGATTTTGGGGCATCCAAGCTCATGTCTGTCGCGAAGTACAACAAGTGGT
CCGTCTTTGGGGATTTGAACTACATCGACCCCGTGTACACGAGCACAGGAGATTTCACGG
ATAAGAGCGACGTCTATAGCTTCGGTGTTGTGCTCCTAGAGCTCATCACCCGGAGGAAGG
CCAAGTACGATGGGACAAGCCTCCGGGTACAATTTGATAAACATTACAAGGATGATGACA
TGAGGAGAAAGATGTATGATCAGGATTTGTTGTCTGACGATGCCCAACCTCACTGCTTGG
AGTGCCTCGACAAGATGGCAGACATCGCGGTTCAATGCCTAAGAAACAACGTCGATGAGA
GGCCAACCATGGCAGAGGTACTGGAGGATCTTAAGAAGTTGAGAGAAAGCGCAAAAACTC
ACAACACATATCCAACTCGTGTAGACGGTGAAGGGAAGCCTGATCGTTAAGCTCTTAGGT
GGCTGCTGATATGCATGGTTTCATGCTTGTTCTTAGTGTTTATTTTACTTTTTGAGTCTC
CATAGCGAATGCCAAGTTGGTGTGATCTACATGCGAGTACATACACTACTACACCGTGTG
TGATTATATATTTTTATGCT