Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0687800-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:27884617:27890894:1 gene:Os11g0687800 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0687800-01);NB-ARC domain containing protein. (Os11t0687800-02)
Sequence	ATGTCTGAAGCGATAGCCCTTGCGATGTCAAAGATTGAAACCTGTGTAGAGACTGGAGCT TCATTCAACAACGCAATGTCCAAGCTATCTAAAAAGGATAAGGTTGTGAAGGAATTGCTG GAAAAGATCAAACAAATACAGGAGCAATTGGATATCACCAATGATTTCATCCAAAATCAC ATAGGCACAGCCAACCTTGGTGACCCATTAGATGAGAGTTGGATTGCCACAGTGAGGAGG CTGGCCTTCATTGTTGAGGATGTAATGGAGAAGTACTTGTATTATGCTCATCAACTGCAG GAAGAGGGGTCACAGAAGCACCCTGTCAAAAGGTCAAGCTATGTCGATGTTTTCAAAAAA GTTGGTCAGTTGATGGACAAGATAAATAATCGCATTGGGCACCTTTTAAGCATCAGAGAG CAGAGTAAGCTTGCACCGCAGCTTGTTCCTCACTCACCATACCCCGATTCAGAGGGCCAA CCGGAGCTCATTGGTACCAATGGCCCAATTAATGTACTACTGAAATTTCTGAAGCATGGT GAGGACGGAGCTGTGCTGCAACTCAAGGTTCTATCTATGCTTGGAATTGGTGGAATTGGT AAAACCGCACTTGCATCCAAGGTGTATCGAATGCTTCGAGAAGAATTTCAGAGCCATGCT TTTGTGACAGTGTCCAAGATGCCTGATATGACAAGGGTCTTATTTGATATATTGGACCAA ATTGGCCTGCGGAAGTATCCAGCTAGTTTGAACGAGAATCAAGTCATTACTCAAATTGGA CAAGACCTAAAGGATAAGAGCTATCTCATTGTAATTGATGATTTATGGGATATGCAACAT TGGAAGACTATCAAGGATGCCTTGCCTGATGTCAATTGTGGTAGCAGATTGATAGTTATA ACTCGTCTAAACAACATAGCCAAAACATGTAGCTCTGGCCAGAATAATTTGACGTATAAG GTCATGCCTCTTGCTCACCATGACTCCAGAACATTGTTTCTCAAGGAAATTTTGGGCCAT GAGGGCAGTTGCTTGGATGCACCAGTTTTTGATGAAATTTTGAAAATGTTTGGTGGTATG CCTTCAGCACTAAAATGTATTGGCTCATTTCTGCGCAACAAATCAGTCACAACTGAGTCT CAGAAGATCAATATGAGTTCTTTGTATTCTGAACTTGAGAATTTTCCTAGCTGGAAGAAA TTGAAAATTGCTCTTTTCCTCAGTTGCTGTGGTCCTTCCCAAACTCTGGAGGCTTGCTCG TTGTACTTAAGTACATTACCAGACAATCATAAGATCGAGAGAGATATTTTGACTAGGAAA TGGATTTCTGAAGGAATTATCCTTAAAGATGATGAGCTTAGTATTAACGGAGTGGTGAAT AATTGCTTTGAGGAACTAATCAATAGGAATGTGATTCAGCAAGTGGACAATAGTTTTGGG GAGTAA

Peptide Sequence

PEP ID	Os11t0687800-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:27884617:27890894:1 gene:Os11g0687800 transcript:Os11t0687800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0687800-01);NB-ARC domain containing protein. (Os11t0687800-02)
Sequence	MSEAIALAMSKIETCVETGASFNNAMSKLSKKDKVVKELLEKIKQIQEQLDITNDFIQNH IGTANLGDPLDESWIATVRRLAFIVEDVMEKYLYYAHQLQEEGSQKHPVKRSSYVDVFKK VGQLMDKINNRIGHLLSIREQSKLAPQLVPHSPYPDSEGQPELIGTNGPINVLLKFLKHG EDGAVLQLKVLSMLGIGGIGKTALASKVYRMLREEFQSHAFVTVSKMPDMTRVLFDILDQ IGLRKYPASLNENQVITQIGQDLKDKSYLIVIDDLWDMQHWKTIKDALPDVNCGSRLIVI TRLNNIAKTCSSGQNNLTYKVMPLAHHDSRTLFLKEILGHEGSCLDAPVFDEILKMFGGM PSALKCIGSFLRNKSVTTESQKINMSSLYSELENFPSWKKLKIALFLSCCGPSQTLEACS LYLSTLPDNHKIERDILTRKWISEGIILKDDELSINGVVNNCFEELINRNVIQQVDNSFG E

Transcript Sequence

Transcript ID	Os11t0687800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:27884617:27890894:1 gene:Os11g0687800 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0687800-01);NB-ARC domain containing protein. (Os11t0687800-02)
Sequence	GCAATCCTCTCTTGCTAGCCATCTCTTGCAACCGGCACTTCCCCCCTGCGAGTCCACGAG ATCTGCTATCGCATCATCAGAGCAGACTAACTAGCAGCCACACTGAGAAAGAGTGCACAA GATGTCTGAAGCGATAGCCCTTGCGATGTCAAAGATTGAAACCTGTGTAGAGACTGGAGC TTCATTCAACAACGCAATGTCCAAGCTATCTAAAAAGGATAAGGTTGTGAAGGAATTGCT GGAAAAGATCAAACAAATACAGGAGCAATTGGATATCACCAATGATTTCATCCAAAATCA CATAGGCACAGCCAACCTTGGTGACCCATTAGATGAGAGTTGGATTGCCACAGTGAGGAG GCTGGCCTTCATTGTTGAGGATGTAATGGAGAAGTACTTGTATTATGCTCATCAACTGCA GGAAGAGGGGTCACAGAAGCACCCTGTCAAAAGGTCAAGCTATGTCGATGTTTTCAAAAA AGTTGGTCAGTTGATGGACAAGATAAATAATCGCATTGGGCACCTTTTAAGCATCAGAGA GCAGAGTAAGCTTGCACCGCAGCTTGTTCCTCACTCACCATACCCCGATTCAGAGGGCCA ACCGGAGCTCATTGGTACCAATGGCCCAATTAATGTACTACTGAAATTTCTGAAGCATGG TGAGGACGGAGCTGTGCTGCAACTCAAGGTTCTATCTATGCTTGGAATTGGTGGAATTGG TAAAACCGCACTTGCATCCAAGGTGTATCGAATGCTTCGAGAAGAATTTCAGAGCCATGC TTTTGTGACAGTGTCCAAGATGCCTGATATGACAAGGGTCTTATTTGATATATTGGACCA AATTGGCCTGCGGAAGTATCCAGCTAGTTTGAACGAGAATCAAGTCATTACTCAAATTGG ACAAGACCTAAAGGATAAGAGCTATCTCATTGTAATTGATGATTTATGGGATATGCAACA TTGGAAGACTATCAAGGATGCCTTGCCTGATGTCAATTGTGGTAGCAGATTGATAGTTAT AACTCGTCTAAACAACATAGCCAAAACATGTAGCTCTGGCCAGAATAATTTGACGTATAA GGTCATGCCTCTTGCTCACCATGACTCCAGAACATTGTTTCTCAAGGAAATTTTGGGCCA TGAGGGCAGTTGCTTGGATGCACCAGTTTTTGATGAAATTTTGAAAATGTTTGGTGGTAT GCCTTCAGCACTAAAATGTATTGGCTCATTTCTGCGCAACAAATCAGTCACAACTGAGTC TCAGAAGATCAATATGAGTTCTTTGTATTCTGAACTTGAGAATTTTCCTAGCTGGAAGAA ATTGAAAATTGCTCTTTTCCTCAGTTGCTGTGGTCCTTCCCAAACTCTGGAGGCTTGCTC GTTGTACTTAAGTACATTACCAGACAATCATAAGATCGAGAGAGATATTTTGACTAGGAA ATGGATTTCTGAAGGAATTATCCTTAAAGATGATGAGCTTAGTATTAACGGAGTGGTGAA TAATTGCTTTGAGGAACTAATCAATAGGAATGTGATTCAGCAAGTGGACAATAGTTTTGG GGAGTAAACCTATGAAATCCAATTTCTGATGCACCACATTCTTAGGCAGATAGCACGAGA AAGGAATTTTGCTACCTTCCTATCGGAAAATATTTTGATATCATGCAAGGAGCCTATCCA TCGCCTCTCATTTCACTGTTCTAAGTTAAGAATTTCGATTGATAAAGGTGATATTCAGAT TATTTCGGATTCAGGAGATTCAAATCAAAAACCTAAGAGTCTATCGCTTGCTCGCTCCAT AACTCTATGTGGTTATGCAAAGCCAGTTTCTTTTAAGCTTTTGGAGCACCTGCACGTGTT AGATCTGGAAGGTTGCTGGAATGTGGACAACTCTACTTTGGATGATATATGCCGCATGAT CCTGCTGCAGTACTTAAGTCTCAAGAAAACACGAATAACTGTGCTACCTCCACAGATTGA GAATCTAAGATGTCTCAAGACACTGGCTGTAACCCAAACTGGAATCGCAGAACTCCCACT GCAAATTGGGAAGTTGCCTGATTTGGAGACTCTGGATGTAAGGCATACACAGGTCAAAGA GATACCGAAGGAACTTGTTCAACTTCCTAAATTGGTGTGTTTGCTTTTTGGTCAAAGTGG TTTTCACGGTGGAGTTAAGTTCCCTGTGGGAGGTAATCCTTCAAAGTCACTAAAGGTGCT GGGTTCCATCGATTCAACACAATGCTCAGCAAGTTTCATGGGGGAGCTTAGTAGTTTGAC AGGGCTGACGAAGCTTTCAGTAGTGTGCTATGACGGGACCAAGGACATGGAGTGGAATCT TCGTATGATGAATTCTATGTTCAAATTTAGCAATCTTGAATCCCTGACAATTTATGGTGA TTTCATTTTGGGCAACGAAGTTCCTGCACTCCAGAATCCTCCTAAACTTCAGAAGTTGAA GTTGGCCGGAAGATGTTTGAGTGTTCCTGGTTGGATTGATAAATTCAGCGATGTTACCCT TCTAGATATCAGGGTTTGCAGCCTAGAAGAGAGTGATATGAAGATACTTTGCAAGATGAG CTCCCTGCAGAGACTTGTGTTAACACAGGTTCACATGCCAATAAAACAACTAGAAATCAC AAAGGAAGCAAGTTTCAGCAAACTAAATGGTTTCACATTTGATTGCCGTGTGCCTTGGGT AACCTTTAAAGAAGAAGCTATGCCAAGTCTGCAATACCTCGAACTGAAGCTTTATGCTGG CCCAGCGGGTAAAATTCCTTCAGGTATTACATGCCTACCATGTCTCACAAAGGTTATCCT CCGGTACTTGGTACATTACCAAAGCAGTGCTAGTGTACAGGATACAATTTCTAAAATGAG AAAAGAAAGCAGTGAGCATCCCAATATGATCGTGCTTTCTCAAAATGGTGAGCATGAGAT TTTCCCACAAAATGCTGTTTCTCGAAATGGCGAACTCGAGATTGTCCCGGTCAATGCTGT TGATGGCATGCATCAGGATTAGCACAGGCAAAAATTGAAGAACAATATTGTCATTGTTAA CGCCCTATCTGACTGCATTCTACTGCCGTTGTTCTCTGGTGGGTTATAAGGACTGGTATA TTAACTTGCATCGTACAAACGGCAAATTAATCCTCATTCTCGTGCCAGACATAGTTGTGG AGCAGACGGGCAAATCAGATCCTATTGGAATTACAATCCTTCTATGACTCAAGCCAACCA AATCAATCAAGATAGAAGCCAAATTAAGTTGAAAAATATTTGCTAGGGATTGCAATTCGC AGCAGTGAGGAGCGCAAGTAACAATCAGGTAGTACTTTGATAATTTGGTTTCTCTAAAGT TCCGCATGTATTAGTATGTATTGAATTGGAATTAATGTGTCCCTGTTCACATTGATATCT AATATATCACGATTTC