Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0686500-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:27793778:27797821:1 gene:Os11g0686500 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0686500-01)
Sequence	ATGTCCATGGAGTCCGCGGCGGCGACCGCATTCTTGAAGACAGTCATGGGGAGGCTGTTC ATGGCGCTGGAGAAAGAGTACAACAAGCACAGAGGCCTCGCGCAAGAAAGCCACTCCCTG CAGCAAGACCTCCGCATGATCGCCGCCGCCATGGACGACCAGCAGCTTTCCATGGGGAGG AGCGACGCCGCCGCACGCACGGCCGTCGCGCGGCTGTACACCGAGGAGATGCTCGACCTC GCGCACGACATCGAGGACTGCGTCGACCGCTTCTTGCACCGCCTCACCTGCAACCACCAC AAACGCGGCGGCGCCGGCGCCGGAGCATCGCTGCTGCGCCGGGTCACGCACGAGCTCAGC AAGGTCAAGAGCCGCTCGAGCTTCGGCGACGAGATCCAGAAGCTCAAGAAACGCCTCAGG GAAGCGCACCAGCGAGTCCTCACCATCAATCCGCCGCCTATTCTCATCGCTGGTGGGTCG TCGTCATCGGCGGCGGTCGCGCCGCCGTGTCGGGCAGCGCGCAGCCCGGTGGGCATCGGG GAGGACGTCGAAGAGCTCCTCTCGATGCTGGACGAGGTGGAGGGCGAGCCGGTGCAGATG CGAGTGATCTCCGTCGTGGGGTTCGGTGGGTTGGGGAAGACGACCCTCGCCAAGGCGGTC TACGATGAACCTCGAGCAAAGGACAAATTCCGCCACCGTGCGTGGGTCGCCGCCGGTGGC TCGCCGGAGATCAGGGGGATCCTCCGTGATGTCCTCCAGCAAGTGCGTCCCGACGATGCC ATGGATGTGGACGGCCAGCGTCTTGAAGCTTCGTTCAAAGACTACCTCAAGGACAAGAGG TATTTAATTGTGATAGATGACATTGGGATGGATCAATGGAGCATCATCAGGTCAGCCTTT GAAGACAATGGAACAAGCAGTAGAATAATACTTACCACAACAATTCAGTCAGTAGCTAAT ATGTGGGCGGACCCAGAAATGGGCCAAGGCCCGGGCCGCTCCATGGAAATTTCAGCCCAA CGCAAAGTTTACATGGTAAAAGGAGGTCCAATAGACTTTTTCCTGGTTAAAAAACATACT TCTCTAATGGGCCTCCCATCCCAGGCCCCGGGCCGTGGACCAGCTTGCCCGGGGTCTGGG TCCGCCCCGTGCAGCCATGGCAGTGGTTATGTGTACCAAATGAACACCCTGGGTGAAGAC GACTCCAAAAAACTAGCTTTTCCAGGGTTTAGATCACCTGAATTGGAGCAAGGTTCAGCA TCCTTATTAGGGAAATGTGATGGTCTTCCTCTTGCTCTGGTCAGTGTCTCTGATTACCTG AAGAGTTCAAGTGAGCCCACAGGAGAGCTTTGTGCTAAATTATGCCGTACTCTGGGCTCT CATCTGAAAGAGAAGCATGGCCATGACAACTTTTCTGAACTCAGGAAGGTGCTTCTTGAC AACTATGACAGTTTATCTGGCTATGCTCTGAGTTGCTTGCTGTACCTTGGTATATTCCCA AGCAATCGTCCTCTGAAGAAGAAAGTTGTAATCAGGCGGTGGTTAGCTGAAGGATATGCA AGAAGTGATTCTCTTCGCAGCGAAGAGGACATTGCCGATGAGAATTTCAGTAAGCTTATT GACCGGCATATCATTCAGCCTATTGACACAAGAAACAATTCTGAAGTAAAGACGTGCAAA ACTCACGGAATTATGCATGAATTTTTGCTGAACAAGTCCTTGACCCAGAGATTCATCGCG ACATCATCTCATGATCATCCAAGACTTGGAATCAATACTACCAATGCACGCCACCTTTCT GTCCATGCTGGCGAACTGAGAGAATGCGTCACATCTGATGAAGAATTATCTCGTGTCCGA TCTCTGACAATCTTTGGGGATGCAAGTGATGCAATTTCATATTTTCGCAAGTGCAAGCTG ATACGAATCTTGGATCTACAAGAATGGAACAATCTAGATGACGATCATCTGAAACACATA TGCAAACTGTGGCATCTGAAATACCTGAGCTTTGGGGGCAATATCAGTGAGCTTCCGAGG AGCATTGAAGGACTTCATTGTTTAGAGACACTGGATTTAAGGAGAACCGAGATAAAGTTT TTGCCCATTGAAGCAATCATGCTGCCCCACTTAGCTCACCTTTTTGGAAAGTTTATGCTT CAGTGTTTAGAGACACTGGATTTAAGGAGAACCGAGATAAAGTTTTTGCCCATTGAAGCA ATCATGCTTCCCCACTTAGCTCACCTATTTGGAAAGTTTATGCTTCATAAAGATGATCTG AAGAATGTGAACAAGAGTAAACTACAAAAATTCTTCTCTTCAAATAAGAGCAACCTGCGA ACTTTAGCAGGATTTATCACTGACGAGGGCAAAGGATTTCTGCAACTTGTTGGTCATATG AAAAAACTGAGGAAGGTTAAGGTATGGTGCAAGCATGTTGCAGGTAGCAGTAATTACATC GCTGATCTTTCACGGGCCATTCAGGAATTCACGAGGACTCCGATTGACAGGGATAGTGAC CGTTCTCTCTCACTTGATTGTGAAGAATGTTCTGAAAATTTTCTGAGCTCAATTGATTTG GAGCCATGCTCTGAAGATTCCAAATACCATCTAAGGTCACTAAAGCTACATGGCAAGTTA CTCCGGTTACCTCCATTTGTTACTTCGCTGTCAGGTCTCACTGAGCTGTGCATTTCATCA GCTATACTGACACAAGATCATCTGTCAGCACTAATCAAACTGAACAGACTTCTTTACCTC AAACTGATCGCAGACAAGCTTGAAAATATTGAAATAAAAATTGGGGCATTCCCAAGCCTG CGACGCCTGTGCTTTGTCATGAAAATTATGACTTCAGCTCTAACAACAATTGAACAAGGG GCTCTATCGAACCTCGTCTCGCTTCAGCTGCTCTGTCAAGGTCTAGTTGGTCTTTCCGGC ATTGAGATCAGACACCTGAAACATCTTAAGGAAATCACCATCGACTCTGCAGTGACTGTA CAAACAAGACAAGATTGGGAACAGGCAGCAAAGAACCACCCAAACAGGCCAAGAGTTCTG TTGTTCAGAAAGGTTGATCCGATGGAAAGCGAGGAGCCTGAAAAACCTTGTGCCATAGGG GAAAAGAGGAAACTTTCTGTAGCCCAGCCAACAGGTTCAGATGGTGGACTGGATTCTAGC CTTAAGAAGATGAGACTTTCAGAGCCTTCTTCTTCTCGGCTTCAGGTGATCGTTCATCCG GTGGTAGTAACAGCCACTGAGGCAGCACCCCAGCATTCGTTTGCGAATCTCTAG

Peptide Sequence

PEP ID	Os11t0686500-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:27793778:27797821:1 gene:Os11g0686500 transcript:Os11t0686500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0686500-01)
Sequence	MSMESAAATAFLKTVMGRLFMALEKEYNKHRGLAQESHSLQQDLRMIAAAMDDQQLSMGR SDAAARTAVARLYTEEMLDLAHDIEDCVDRFLHRLTCNHHKRGGAGAGASLLRRVTHELS KVKSRSSFGDEIQKLKKRLREAHQRVLTINPPPILIAGGSSSSAAVAPPCRAARSPVGIG EDVEELLSMLDEVEGEPVQMRVISVVGFGGLGKTTLAKAVYDEPRAKDKFRHRAWVAAGG SPEIRGILRDVLQQVRPDDAMDVDGQRLEASFKDYLKDKRYLIVIDDIGMDQWSIIRSAF EDNGTSSRIILTTTIQSVANMWADPEMGQGPGRSMEISAQRKVYMVKGGPIDFFLVKKHT SLMGLPSQAPGRGPACPGSGSAPCSHGSGYVYQMNTLGEDDSKKLAFPGFRSPELEQGSA SLLGKCDGLPLALVSVSDYLKSSSEPTGELCAKLCRTLGSHLKEKHGHDNFSELRKVLLD NYDSLSGYALSCLLYLGIFPSNRPLKKKVVIRRWLAEGYARSDSLRSEEDIADENFSKLI DRHIIQPIDTRNNSEVKTCKTHGIMHEFLLNKSLTQRFIATSSHDHPRLGINTTNARHLS VHAGELRECVTSDEELSRVRSLTIFGDASDAISYFRKCKLIRILDLQEWNNLDDDHLKHI CKLWHLKYLSFGGNISELPRSIEGLHCLETLDLRRTEIKFLPIEAIMLPHLAHLFGKFML QCLETLDLRRTEIKFLPIEAIMLPHLAHLFGKFMLHKDDLKNVNKSKLQKFFSSNKSNLR TLAGFITDEGKGFLQLVGHMKKLRKVKVWCKHVAGSSNYIADLSRAIQEFTRTPIDRDSD RSLSLDCEECSENFLSSIDLEPCSEDSKYHLRSLKLHGKLLRLPPFVTSLSGLTELCISS AILTQDHLSALIKLNRLLYLKLIADKLENIEIKIGAFPSLRRLCFVMKIMTSALTTIEQG ALSNLVSLQLLCQGLVGLSGIEIRHLKHLKEITIDSAVTVQTRQDWEQAAKNHPNRPRVL LFRKVDPMESEEPEKPCAIGEKRKLSVAQPTGSDGGLDSSLKKMRLSEPSSSRLQVIVHP VVVTATEAAPQHSFANL

Transcript Sequence

Transcript ID	Os11t0686500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:27793778:27797821:1 gene:Os11g0686500 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0686500-01)
Sequence	GAGGATGCAAGGCTTGCAGAGCAGCTGCCCAAGCTGCTGCTGCTGCTCATCCTTGGCACA TGTCCATGGAGTCCGCGGCGGCGACCGCATTCTTGAAGACAGTCATGGGGAGGCTGTTCA TGGCGCTGGAGAAAGAGTACAACAAGCACAGAGGCCTCGCGCAAGAAAGCCACTCCCTGC AGCAAGACCTCCGCATGATCGCCGCCGCCATGGACGACCAGCAGCTTTCCATGGGGAGGA GCGACGCCGCCGCACGCACGGCCGTCGCGCGGCTGTACACCGAGGAGATGCTCGACCTCG CGCACGACATCGAGGACTGCGTCGACCGCTTCTTGCACCGCCTCACCTGCAACCACCACA AACGCGGCGGCGCCGGCGCCGGAGCATCGCTGCTGCGCCGGGTCACGCACGAGCTCAGCA AGGTCAAGAGCCGCTCGAGCTTCGGCGACGAGATCCAGAAGCTCAAGAAACGCCTCAGGG AAGCGCACCAGCGAGTCCTCACCATCAATCCGCCGCCTATTCTCATCGCTGGTGGGTCGT CGTCATCGGCGGCGGTCGCGCCGCCGTGTCGGGCAGCGCGCAGCCCGGTGGGCATCGGGG AGGACGTCGAAGAGCTCCTCTCGATGCTGGACGAGGTGGAGGGCGAGCCGGTGCAGATGC GAGTGATCTCCGTCGTGGGGTTCGGTGGGTTGGGGAAGACGACCCTCGCCAAGGCGGTCT ACGATGAACCTCGAGCAAAGGACAAATTCCGCCACCGTGCGTGGGTCGCCGCCGGTGGCT CGCCGGAGATCAGGGGGATCCTCCGTGATGTCCTCCAGCAAGTGCGTCCCGACGATGCCA TGGATGTGGACGGCCAGCGTCTTGAAGCTTCGTTCAAAGACTACCTCAAGGACAAGAGGT ATTTAATTGTGATAGATGACATTGGGATGGATCAATGGAGCATCATCAGGTCAGCCTTTG AAGACAATGGAACAAGCAGTAGAATAATACTTACCACAACAATTCAGTCAGTAGCTAATA TGTGGGCGGACCCAGAAATGGGCCAAGGCCCGGGCCGCTCCATGGAAATTTCAGCCCAAC GCAAAGTTTACATGGTAAAAGGAGGTCCAATAGACTTTTTCCTGGTTAAAAAACATACTT CTCTAATGGGCCTCCCATCCCAGGCCCCGGGCCGTGGACCAGCTTGCCCGGGGTCTGGGT CCGCCCCGTGCAGCCATGGCAGTGGTTATGTGTACCAAATGAACACCCTGGGTGAAGACG ACTCCAAAAAACTAGCTTTTCCAGGGTTTAGATCACCTGAATTGGAGCAAGGTTCAGCAT CCTTATTAGGGAAATGTGATGGTCTTCCTCTTGCTCTGGTCAGTGTCTCTGATTACCTGA AGAGTTCAAGTGAGCCCACAGGAGAGCTTTGTGCTAAATTATGCCGTACTCTGGGCTCTC ATCTGAAAGAGAAGCATGGCCATGACAACTTTTCTGAACTCAGGAAGGTGCTTCTTGACA ACTATGACAGTTTATCTGGCTATGCTCTGAGTTGCTTGCTGTACCTTGGTATATTCCCAA GCAATCGTCCTCTGAAGAAGAAAGTTGTAATCAGGCGGTGGTTAGCTGAAGGATATGCAA GAAGTGATTCTCTTCGCAGCGAAGAGGACATTGCCGATGAGAATTTCAGTAAGCTTATTG ACCGGCATATCATTCAGCCTATTGACACAAGAAACAATTCTGAAGTAAAGACGTGCAAAA CTCACGGAATTATGCATGAATTTTTGCTGAACAAGTCCTTGACCCAGAGATTCATCGCGA CATCATCTCATGATCATCCAAGACTTGGAATCAATACTACCAATGCACGCCACCTTTCTG TCCATGCTGGCGAACTGAGAGAATGCGTCACATCTGATGAAGAATTATCTCGTGTCCGAT CTCTGACAATCTTTGGGGATGCAAGTGATGCAATTTCATATTTTCGCAAGTGCAAGCTGA TACGAATCTTGGATCTACAAGAATGGAACAATCTAGATGACGATCATCTGAAACACATAT GCAAACTGTGGCATCTGAAATACCTGAGCTTTGGGGGCAATATCAGTGAGCTTCCGAGGA GCATTGAAGGACTTCATTGTTTAGAGACACTGGATTTAAGGAGAACCGAGATAAAGTTTT TGCCCATTGAAGCAATCATGCTGCCCCACTTAGCTCACCTTTTTGGAAAGTTTATGCTTC AGTGTTTAGAGACACTGGATTTAAGGAGAACCGAGATAAAGTTTTTGCCCATTGAAGCAA TCATGCTTCCCCACTTAGCTCACCTATTTGGAAAGTTTATGCTTCATAAAGATGATCTGA AGAATGTGAACAAGAGTAAACTACAAAAATTCTTCTCTTCAAATAAGAGCAACCTGCGAA CTTTAGCAGGATTTATCACTGACGAGGGCAAAGGATTTCTGCAACTTGTTGGTCATATGA AAAAACTGAGGAAGGTTAAGGTATGGTGCAAGCATGTTGCAGGTAGCAGTAATTACATCG CTGATCTTTCACGGGCCATTCAGGAATTCACGAGGACTCCGATTGACAGGGATAGTGACC GTTCTCTCTCACTTGATTGTGAAGAATGTTCTGAAAATTTTCTGAGCTCAATTGATTTGG AGCCATGCTCTGAAGATTCCAAATACCATCTAAGGTCACTAAAGCTACATGGCAAGTTAC TCCGGTTACCTCCATTTGTTACTTCGCTGTCAGGTCTCACTGAGCTGTGCATTTCATCAG CTATACTGACACAAGATCATCTGTCAGCACTAATCAAACTGAACAGACTTCTTTACCTCA AACTGATCGCAGACAAGCTTGAAAATATTGAAATAAAAATTGGGGCATTCCCAAGCCTGC GACGCCTGTGCTTTGTCATGAAAATTATGACTTCAGCTCTAACAACAATTGAACAAGGGG CTCTATCGAACCTCGTCTCGCTTCAGCTGCTCTGTCAAGGTCTAGTTGGTCTTTCCGGCA TTGAGATCAGACACCTGAAACATCTTAAGGAAATCACCATCGACTCTGCAGTGACTGTAC AAACAAGACAAGATTGGGAACAGGCAGCAAAGAACCACCCAAACAGGCCAAGAGTTCTGT TGTTCAGAAAGGTTGATCCGATGGAAAGCGAGGAGCCTGAAAAACCTTGTGCCATAGGGG AAAAGAGGAAACTTTCTGTAGCCCAGCCAACAGGTTCAGATGGTGGACTGGATTCTAGCC TTAAGAAGATGAGACTTTCAGAGCCTTCTTCTTCTCGGCTTCAGGTGATCGTTCATCCGG TGGTAGTAACAGCCACTGAGGCAGCACCCCAGCATTCGTTTGCGAATCTCTAGCACATAT ATTCAACTGCAGCAGACTGCAATAAAATACAATTCAAAATTTGCAAGAAAAGCTTAGCAA TCTTTATTTCTGTTCAGTACATCTGTTAGACAGTTACATGGTCCAGATTTCTGTCTTTCC CTACTTGTTGTGTACTTCCTACAGTTACTGTTTAGCTACATTAGTGTGGAACTTTACGTG CCTAGAGCTTTGAAAATGCTTTGTTTTCGTTGAAATGAGTTGTTGTCTGTAAGTCTATTG GAAAGAAGTGAATGCCAGGAAGTGAATTTGTCCAAAAGTCGCCGAAGGCTGTATGTTCAG GCCTCAGGGTCTAAATTGACCTTGTTTTGTGTAAGTTTAGGGTGTTCAATAATGTAACTT TAGGGGATAATTTGGGGATTTTTCACTGTACTTTGATCCAGCCCTAAAGGGCAAGTATAA ATGTGTACAAGAGATGT