Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0679700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:27486903:27490269:1 gene:Os11g0679700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glycerol-3-Phosphate Acyltransferase 3 description:Glycerol-3-phosphate acyltransferase, Anther development, Pollen formation (Os11t0679700-01)
Sequence	ATGCCCAAGAAGAAGCTGTCACATAGGCTGTTCTCTGCCTTGGTATCCCTACTCCTTCAT GGGAAGCCTATCTCTAGATCATCATCCAACACCAACACCACATTGCCACACCCTTCCTTG CTGCACAAGTCCTCCTCAAGCTTCCCTCCCATGGAGAAGCTCGCCGCGAAAACCCTAGTA CTCGACGTCGAAGGCGGTTTGCTTAGATCATCCTCCTTGTTCCCCTACTTCATGCTTGTG GCACTAGAGGCAGGAGGGTTCTTGAGGGGCCTTGTGCTCCTCCTCCTCTACCCATTGCTA TGTGTCATGGGAAGTGACATGGCCTTGAAGGTCATGGCAATGGTGTCCTTCTGCGGTTTA CGGGCAAGCCGGTTTCGGGCCGGGCGAGCCGTGCTTCCCAAGTGGTTCCTTGAGGATGTT GGGGAGGAAGGGTTTGATGTGATGAGGAGTGCCATGAGGAGGGTGTGTGTGACAAAGATG CCTAGGATCATGGTTGAAGGGTTCTTGAAGGAGTACTTGGAGGTTGAGGTTGTTTCAGGT AGGGAGATGAAGGTGATTTGGGGGTTCTTCACTGGCATCATGGAGGAGGAAGAAGGTGGT GATCAAGAGGAGGTGTTGCTTGAGGAGAAGAAAATGTTGGTTGATGTTGTGGGCTTCTCT ACCTCCTTGGAGTTCCTCCAACATCATCTCTCACATTGTTGCAAGGAGGTGTACCTGGTG ACACGTGAGGAGAAGGCGAGGTGGTCGGCGCTGCCGCGCGACAAGTACCCGAAGCCGATG GTGTTCCACGACGGCCGCCTCGCGTTCCGGCCAGCCGCCGGCGACACGCTCGCCATGTTC ACCTGGCTCCCCTTCGGCGCCGCCCTCGCCGTCGCCCGCCTCGCCGTCGCGCTCGCCGTG CCGTACAGGTACTCGACGCCGATCCTGGCCGCCACGGGCTTGTCGTGGCGCCTCAAGGGC GAGGCCCCCACGCCGCTCGCCGGCGCCGGCGACGGCGCGCGCCGGCGCGGGCAGCTGTTC GTGTGCAACCACCGGACGCTGATCGACCCGGTGTACGTGTCGGTGGCGCTGGACCGCCCC GTGCGCGCCGTGTCGTACAGCCTGAGCCGGCTGTCGGAGCTGATCTCGCCGATCGGGCGG ACGGTGCGGCTGACGCGGGACCGCGACAGCGACGGGCGCGCCATGGCGCGGCTCCTCGAC GGCGGCGACCTCGTCGTCGTCTGCCCCGAGGGGACGACGTGCCGGGAGCCGTGCCTGCTC CGGTTCAGCCCGCTGTTCGCGGAGCTGAGCGACGACGTGGTCCCCGTCGGGATCGCCGTC GACACGGCGATGTTCTACGCGACGACGGCCGGCGGGCTCAAGTGCCTGGACCCGCTCTAC TACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACGTCG CCGGCGAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGGATG GGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATGCTC GCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAGAAG AAGATGCAATAA

Peptide Sequence

PEP ID	Os11t0679700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:27486903:27490269:1 gene:Os11g0679700 transcript:Os11t0679700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glycerol-3-Phosphate Acyltransferase 3 description:Glycerol-3-phosphate acyltransferase, Anther development, Pollen formation (Os11t0679700-01)
Sequence	MPKKKLSHRLFSALVSLLLHGKPISRSSSNTNTTLPHPSLLHKSSSSFPPMEKLAAKTLV LDVEGGLLRSSSLFPYFMLVALEAGGFLRGLVLLLLYPLLCVMGSDMALKVMAMVSFCGL RASRFRAGRAVLPKWFLEDVGEEGFDVMRSAMRRVCVTKMPRIMVEGFLKEYLEVEVVSG REMKVIWGFFTGIMEEEEGGDQEEVLLEEKKMLVDVVGFSTSLEFLQHHLSHCCKEVYLV TREEKARWSALPRDKYPKPMVFHDGRLAFRPAAGDTLAMFTWLPFGAALAVARLAVALAV PYRYSTPILAATGLSWRLKGEAPTPLAGAGDGARRRGQLFVCNHRTLIDPVYVSVALDRP VRAVSYSLSRLSELISPIGRTVRLTRDRDSDGRAMARLLDGGDLVVVCPEGTTCREPCLL RFSPLFAELSDDVVPVGIAVDTAMFYATTAGGLKCLDPLYYIANPRTCYAVQFLERVDTS PARERRAPSTDVANLVQRRMGDALGYRCTMLTRKDKYLMLAGNDGVVNTTQDNHSAPGKK KMQ

Transcript Sequence

Transcript ID	Os11t0679700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:27486903:27490269:1 gene:Os11g0679700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glycerol-3-Phosphate Acyltransferase 3 description:Glycerol-3-phosphate acyltransferase, Anther development, Pollen formation (Os11t0679700-01)
Sequence	ACAATTCAATCCATTTCTTCCTCTACCATACTATACCTAGCTTGCCACCAACAACAGTAC ACCATGCCCAAGAAGAAGCTGTCACATAGGCTGTTCTCTGCCTTGGTATCCCTACTCCTT CATGGGAAGCCTATCTCTAGATCATCATCCAACACCAACACCACATTGCCACACCCTTCC TTGCTGCACAAGTCCTCCTCAAGCTTCCCTCCCATGGAGAAGCTCGCCGCGAAAACCCTA GTACTCGACGTCGAAGGCGGTTTGCTTAGATCATCCTCCTTGTTCCCCTACTTCATGCTT GTGGCACTAGAGGCAGGAGGGTTCTTGAGGGGCCTTGTGCTCCTCCTCCTCTACCCATTG CTATGTGTCATGGGAAGTGACATGGCCTTGAAGGTCATGGCAATGGTGTCCTTCTGCGGT TTACGGGCAAGCCGGTTTCGGGCCGGGCGAGCCGTGCTTCCCAAGTGGTTCCTTGAGGAT GTTGGGGAGGAAGGGTTTGATGTGATGAGGAGTGCCATGAGGAGGGTGTGTGTGACAAAG ATGCCTAGGATCATGGTTGAAGGGTTCTTGAAGGAGTACTTGGAGGTTGAGGTTGTTTCA GGTAGGGAGATGAAGGTGATTTGGGGGTTCTTCACTGGCATCATGGAGGAGGAAGAAGGT GGTGATCAAGAGGAGGTGTTGCTTGAGGAGAAGAAAATGTTGGTTGATGTTGTGGGCTTC TCTACCTCCTTGGAGTTCCTCCAACATCATCTCTCACATTGTTGCAAGGAGGTGTACCTG GTGACACGTGAGGAGAAGGCGAGGTGGTCGGCGCTGCCGCGCGACAAGTACCCGAAGCCG ATGGTGTTCCACGACGGCCGCCTCGCGTTCCGGCCAGCCGCCGGCGACACGCTCGCCATG TTCACCTGGCTCCCCTTCGGCGCCGCCCTCGCCGTCGCCCGCCTCGCCGTCGCGCTCGCC GTGCCGTACAGGTACTCGACGCCGATCCTGGCCGCCACGGGCTTGTCGTGGCGCCTCAAG GGCGAGGCCCCCACGCCGCTCGCCGGCGCCGGCGACGGCGCGCGCCGGCGCGGGCAGCTG TTCGTGTGCAACCACCGGACGCTGATCGACCCGGTGTACGTGTCGGTGGCGCTGGACCGC CCCGTGCGCGCCGTGTCGTACAGCCTGAGCCGGCTGTCGGAGCTGATCTCGCCGATCGGG CGGACGGTGCGGCTGACGCGGGACCGCGACAGCGACGGGCGCGCCATGGCGCGGCTCCTC GACGGCGGCGACCTCGTCGTCGTCTGCCCCGAGGGGACGACGTGCCGGGAGCCGTGCCTG CTCCGGTTCAGCCCGCTGTTCGCGGAGCTGAGCGACGACGTGGTCCCCGTCGGGATCGCC GTCGACACGGCGATGTTCTACGCGACGACGGCCGGCGGGCTCAAGTGCCTGGACCCGCTC TACTACATCGCCAACCCGAGGACGTGCTACGCCGTGCAGTTCCTGGAGAGGGTGGACACG TCGCCGGCGAGGGAGCGGAGGGCGCCGTCCACCGACGTGGCCAACCTCGTGCAGAGGAGG ATGGGCGACGCGCTCGGCTACCGCTGCACCATGCTCACCAGGAAGGACAAGTACCTCATG CTCGCCGGCAACGATGGCGTCGTCAACACCACCCAAGACAACCACTCTGCTCCGGGGAAG AAGAAGATGCAATAATTATGAATTAGATTAGCCAAAAAAGTTCTCAAAAAAGTTCTAGAT AGATTTCGGTTGTTCTTTTATCTTTTTAATTATTTTTTTATGTTGCTGGGTAGTTTAATT TGGTGTGTGTTTATACTGTATTTCATTCTTGCTTCAGTTTGGCTGGTGTGTTCATCAGGT TGATTTCTTCTGTGTGTTTTAATCAAATTAATGATTGTATAGAAACAACAAGAAGCTGGC ACCATCAAGGAGCTTGTAGAGAAAGTACTACT