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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0678200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:27408007:27409934:1 gene:Os11g0678200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0678200-01)
Sequence

ATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGTAAGCCCAGAGGAAGCAGGGAAGGGT
AAATGGTACATCGCAACTGCTGCTACCAACCACATGACCAATGACAAGAGCCTCATCTCC
GACCTCAAGCCTGTCGCCGATGGCCGTAATATCATTGCTGATGGCAATGGTGCAGGGTTG
AAGGTGCAGGGCAGGGGAGCTGTGAACACAGAAACTGTGGTTCTCCCTGCAGAAGTGTGG
TATGTGCCGGAGATTGATGAAAACTTGGTTTCTGTTGACCAGCTCAATGAACTTGGCCTC
AGTATTTCGATTGGCCGAGGTGTATGCACCGTCACTAGAGTTAGTGATGGATCTGTAGTT
GGCAAAGCGCGTAGATCAGGTGGAGTCTATGAGGTGGAATTCCTCAAGGTTCCCCTTAAT
TAG

Peptide Sequence

PEP ID

Os11t0678200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:27408007:27409934:1 gene:Os11g0678200 transcript:Os11t0678200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0678200-01)
Sequence

MASSASWPAFGVSPEEAGKGKWYIATAATNHMTNDKSLISDLKPVADGRNIIADGNGAGL
KVQGRGAVNTETVVLPAEVWYVPEIDENLVSVDQLNELGLSISIGRGVCTVTRVSDGSVV
GKARRSGGVYEVEFLKVPLN

Transcript Sequence

Transcript ID

Os11t0678200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:27408007:27409934:1 gene:Os11g0678200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0678200-01)
Sequence

GTGAGCCAAGCTTTGGTACGCGCAGCACTTCTTCTCATCCCTTCCCCGAACTCACGAACG
CACGCCGCCACCACCGCCCACCGTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCC
GGCGTTCGGAGTAAGCCCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGC
TACCAACCACATGACCAATGACAAGAGCCTCATCTCCGACCTCAAGCCTGTCGCCGATGG
CCGTAATATCATTGCTGATGGCAATGGTGCAGGGTTGAAGGTGCAGGGCAGGGGAGCTGT
GAACACAGAAACTGTGGTTCTCCCTGCAGAAGTGTGGTATGTGCCGGAGATTGATGAAAA
CTTGGTTTCTGTTGACCAGCTCAATGAACTTGGCCTCAGTATTTCGATTGGCCGAGGTGT
ATGCACCGTCACTAGAGTTAGTGATGGATCTGTAGTTGGCAAAGCGCGTAGATCAGGTGG
AGTCTATGAGGTGGAATTCCTCAAGGTTCCCCTTAATTAGCACCAGAAATTCCTTGCTGC
AGTATCAGTTGGGGTAGTCAGACTCGTATGATGATATTGCCTACTATATGCAATGCTTGT
TGGGTTGGAACTTAAGTTGGATCTTTCAGTAGTTAAGGGATCTGGAGTTTTCTCTGAATG
TAAAAACTAAAAAGTGAAAGAAGGAGCTGCCTGTGAGCAGAACTGAGGATTTTACCATGT
TGGTTTGACCTTGTCTTTTACCACTGTTTTTAAGTTCCTGTAGCCTGTTGAGCTGTTCAT
ATCC