Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0673100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:27200382:27202904:-1 gene:Os11g0673100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0673100-01)
Sequence

ATGGGGTGGGCGGCGCGGTTCCTCACGGCAGTGTCCTTCCTCGCCGCCGGCGTGCTCTTC
GCGCCGGACGCTCTCCTCGGTGGCTCCGGCCGCTCCGGCGCCGGGGTCGCGGCGGCGAGG
CTGGCGCACGTCCTCTGCTTCGCCACCGCCTGGGGCGCCGCGCTCTGGGTCACCTTCATC
GGCGGCATCGTCATGTTCAAGTATTTGCCAAGGCACCAGTTTGGGAGTCTACAAGGGAAA
ATGTTCCCAGCCTACTTCATGTTGATATCAGTATGCTCGGCTATATCAGTGGCAGCTTTT
GCGTATCTACATCCTTGGAAGACGGCATCTACCATTGAGCGCTATCAGCTTGGATTCTTG
ATCTCCGCCCTTGGTTTTGACCTTTCCAACCTTCTGGTTTTCACGCCCATGACCACTGAG
ATGATGATGAGGCGGCACAAGATCGAGAAAGACCTCGGCATCGGCAGCGAGGTCGGGTTT
TCGAAGAACGCGGAGGTGGCGAGGACGAACCCAACGCTGGCGGCCATGAACAAGAAGTTC
GGGATGATCCATGGCCTGTCGTCTCTGGCCAACATCATGGCGTTCGGTAGCCTTGCAATG
CACTCCTGGTACCTCGCCAGCAAGCTCCAGATCTGA

Peptide Sequence

PEP ID

Os11t0673100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:27200382:27202904:-1 gene:Os11g0673100 transcript:Os11t0673100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0673100-01)
Sequence

MGWAARFLTAVSFLAAGVLFAPDALLGGSGRSGAGVAAARLAHVLCFATAWGAALWVTFI
GGIVMFKYLPRHQFGSLQGKMFPAYFMLISVCSAISVAAFAYLHPWKTASTIERYQLGFL
ISALGFDLSNLLVFTPMTTEMMMRRHKIEKDLGIGSEVGFSKNAEVARTNPTLAAMNKKF
GMIHGLSSLANIMAFGSLAMHSWYLASKLQI

Transcript Sequence

Transcript ID

Os11t0673100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:27200382:27202904:-1 gene:Os11g0673100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0673100-01)
Sequence

ACACTCTGTGCTTAAGTTGAGTTCAATTTCATTTCCAATCACACAGATTTGCTCTCTTCT
TCTTCTTCCTCCATTCAATCTCTCGGAATCCGAACCCTAGCCTGGTAGGGTGGGGGCACG
ATGGGGTGGGCGGCGCGGTTCCTCACGGCAGTGTCCTTCCTCGCCGCCGGCGTGCTCTTC
GCGCCGGACGCTCTCCTCGGTGGCTCCGGCCGCTCCGGCGCCGGGGTCGCGGCGGCGAGG
CTGGCGCACGTCCTCTGCTTCGCCACCGCCTGGGGCGCCGCGCTCTGGGTCACCTTCATC
GGCGGCATCGTCATGTTCAAGTATTTGCCAAGGCACCAGTTTGGGAGTCTACAAGGGAAA
ATGTTCCCAGCCTACTTCATGTTGATATCAGTATGCTCGGCTATATCAGTGGCAGCTTTT
GCGTATCTACATCCTTGGAAGACGGCATCTACCATTGAGCGCTATCAGCTTGGATTCTTG
ATCTCCGCCCTTGGTTTTGACCTTTCCAACCTTCTGGTTTTCACGCCCATGACCACTGAG
ATGATGATGAGGCGGCACAAGATCGAGAAAGACCTCGGCATCGGCAGCGAGGTCGGGTTT
TCGAAGAACGCGGAGGTGGCGAGGACGAACCCAACGCTGGCGGCCATGAACAAGAAGTTC
GGGATGATCCATGGCCTGTCGTCTCTGGCCAACATCATGGCGTTCGGTAGCCTTGCAATG
CACTCCTGGTACCTCGCCAGCAAGCTCCAGATCTGACGGCATCATCACCACTGCTTCTCC
CATGTCTCCATGTTCTGTGCCTCTGAGTTCTGAAGCTTGTTGCCGTAAGCTGCTGATCAA
AAGTTGTATACTAGGTTTATGTAACAGATAAACTGATGAAGGAACTTGTGATAGAAACTT
TGCAATAATTTGGAGAAATGATGT