Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0673000-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:27198361:27199970:-1 gene:Os11g0673000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0673000-00)
Sequence	ATGGCCGGCGACGGCGAGCCGCCGGCGCTGTCCGCCGCGGTGACGACGCCGGACGGGTGG CACCCGCGCACGGCGGAGCGGCGCCTCCTCCACCTCCTGCACCACTCCCCTCCCGCGCGG CGGCGGCCGCTCGAGCTCCTCGCCTTCGCCGTCCGACACTGCCTCCCGTCGTCGCCGCCG TCCCCGCACCACCACTCCCTCGCCGCGCTGCTGCTCCTCTCCTCCCCGCCGCCGCCGGCT CTCCCGCTCCTCCGCCTCGTCCCGCCTCACGCGCCGCCTCCGCTGCCTCTCCTCAACGCC GCCATCAAGGCCCTCTCGGCCTCCTCGCCGCCGCTCGCGTTCCGGCTCCTCTCCTCTCTC CGCCGCCTCCACGCGCCCGACCGCCTCTCGTTCCTGCCCCTCCTAGGTTGCGTATCGTCC CTTTCTCTCCTCTCCGCAGTCCACGCGCTTCTTCTCCGCCTCGGTTTCCTTTCACATCAC GCCATCTCTCTCGCGCTCCTCAAGCCATATCCTCTCCACTACGCCCGCGTCCTGTTTGAC GAAATGACGCAGAGGAACAAGTGCACCGTCGCCTACAACACACTCATCACGGCCTGTTTC CGAGCTGATGATCTTGGTGCCGCACGCCACCTGTTCGACGAAATGCAGAGATACAGGCGC TCCAGGAGGAGCGTGGTTTCTTGGAATGTTATGATCGCGGGGTGTGCTTGGTGCAAGAAG GATGACATTGCGGTCTTGTGCTTTGAGAGGATGGTCAGGGAGGGGGAGGTGGCACCGGAT GATGGGACCCTTGCTGCTGTGCTGCCGGTCTGTGGGAGGTTGGGGAATGTCGGGGTGGGG AGATGGGCACATGAGCATGCACGTAAGAGTGGGTTGCTAGACAGGAAAGTACATGTTGCA AATGCAGTGATGGATATGTATTGCAAGTGTGGTGATGTTCATAGTGCAAGGGAGGTATTC AAGGGAATGCGACAGCGGAGTGTGGTGAGCTGGAACACCATGATTTCAGGATTTTCATTG AATGGCCATGGGATTGAGGGCATTGAGCTTTACCGAGAGATGAGGACACACGGTGAGATG CCCAATGAAGTGACATTTCTGGGGGTGCTTGGCTGCTGTGCGCATGCTGGGGCTGTGGAT GTTGGGAGGGACATCTTCCAGAGCATGCAGCTAGAGCATGGTATTGAGCCAGTAATTGAG CATTATGGTTGTATGGTAGATTTATTTGGAAGATCTGGCCTTCTTGAGGAGGCATATGCA TTGATTCAAGGGATGCCAATGAGACCTAATGCTGCGATATGGGGTGCACTGCTAAGCGCA TGCCATGCTCATTCTGGGATTAGCATAGCTGAGGTGGCACTGAAAGAACTTATTAACCTT GAACCATGGAACTCAGGGAACTATGTCCTGTTGGCCAATCTTTATGCGGAAACAGGACGA TGGGAGGAGGCAGGGGATGCGAGGAGACTGATGAGGAGGATGAGTGTGCAAAAGGCTCCA GGGCAGAGCTTAATCGAAGAAACCGAGTTTCAGTTCACAAATACATGA

Peptide Sequence

PEP ID	Os11t0673000-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:27198361:27199970:-1 gene:Os11g0673000 transcript:Os11t0673000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0673000-00)
Sequence	MAGDGEPPALSAAVTTPDGWHPRTAERRLLHLLHHSPPARRRPLELLAFAVRHCLPSSPP SPHHHSLAALLLLSSPPPPALPLLRLVPPHAPPPLPLLNAAIKALSASSPPLAFRLLSSL RRLHAPDRLSFLPLLGCVSSLSLLSAVHALLLRLGFLSHHAISLALLKPYPLHYARVLFD EMTQRNKCTVAYNTLITACFRADDLGAARHLFDEMQRYRRSRRSVVSWNVMIAGCAWCKK DDIAVLCFERMVREGEVAPDDGTLAAVLPVCGRLGNVGVGRWAHEHARKSGLLDRKVHVA NAVMDMYCKCGDVHSAREVFKGMRQRSVVSWNTMISGFSLNGHGIEGIELYREMRTHGEM PNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHGIEPVIEHYGCMVDLFGRSGLLEEAYA LIQGMPMRPNAAIWGALLSACHAHSGISIAEVALKELINLEPWNSGNYVLLANLYAETGR WEEAGDARRLMRRMSVQKAPGQSLIEETEFQFTNT

Transcript Sequence

Transcript ID	Os11t0673000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:27198361:27199970:-1 gene:Os11g0673000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0673000-00)
Sequence	AAACGTGGCCGCGCGGTTCAGACCTCCGCCGCGCGCCGCCGATGGCCGGCGACGGCGAGC CGCCGGCGCTGTCCGCCGCGGTGACGACGCCGGACGGGTGGCACCCGCGCACGGCGGAGC GGCGCCTCCTCCACCTCCTGCACCACTCCCCTCCCGCGCGGCGGCGGCCGCTCGAGCTCC TCGCCTTCGCCGTCCGACACTGCCTCCCGTCGTCGCCGCCGTCCCCGCACCACCACTCCC TCGCCGCGCTGCTGCTCCTCTCCTCCCCGCCGCCGCCGGCTCTCCCGCTCCTCCGCCTCG TCCCGCCTCACGCGCCGCCTCCGCTGCCTCTCCTCAACGCCGCCATCAAGGCCCTCTCGG CCTCCTCGCCGCCGCTCGCGTTCCGGCTCCTCTCCTCTCTCCGCCGCCTCCACGCGCCCG ACCGCCTCTCGTTCCTGCCCCTCCTAGGTTGCGTATCGTCCCTTTCTCTCCTCTCCGCAG TCCACGCGCTTCTTCTCCGCCTCGGTTTCCTTTCACATCACGCCATCTCTCTCGCGCTCC TCAAGCCATATCCTCTCCACTACGCCCGCGTCCTGTTTGACGAAATGACGCAGAGGAACA AGTGCACCGTCGCCTACAACACACTCATCACGGCCTGTTTCCGAGCTGATGATCTTGGTG CCGCACGCCACCTGTTCGACGAAATGCAGAGATACAGGCGCTCCAGGAGGAGCGTGGTTT CTTGGAATGTTATGATCGCGGGGTGTGCTTGGTGCAAGAAGGATGACATTGCGGTCTTGT GCTTTGAGAGGATGGTCAGGGAGGGGGAGGTGGCACCGGATGATGGGACCCTTGCTGCTG TGCTGCCGGTCTGTGGGAGGTTGGGGAATGTCGGGGTGGGGAGATGGGCACATGAGCATG CACGTAAGAGTGGGTTGCTAGACAGGAAAGTACATGTTGCAAATGCAGTGATGGATATGT ATTGCAAGTGTGGTGATGTTCATAGTGCAAGGGAGGTATTCAAGGGAATGCGACAGCGGA GTGTGGTGAGCTGGAACACCATGATTTCAGGATTTTCATTGAATGGCCATGGGATTGAGG GCATTGAGCTTTACCGAGAGATGAGGACACACGGTGAGATGCCCAATGAAGTGACATTTC TGGGGGTGCTTGGCTGCTGTGCGCATGCTGGGGCTGTGGATGTTGGGAGGGACATCTTCC AGAGCATGCAGCTAGAGCATGGTATTGAGCCAGTAATTGAGCATTATGGTTGTATGGTAG ATTTATTTGGAAGATCTGGCCTTCTTGAGGAGGCATATGCATTGATTCAAGGGATGCCAA TGAGACCTAATGCTGCGATATGGGGTGCACTGCTAAGCGCATGCCATGCTCATTCTGGGA TTAGCATAGCTGAGGTGGCACTGAAAGAACTTATTAACCTTGAACCATGGAACTCAGGGA ACTATGTCCTGTTGGCCAATCTTTATGCGGAAACAGGACGATGGGAGGAGGCAGGGGATG CGAGGAGACTGATGAGGAGGATGAGTGTGCAAAAGGCTCCAGGGCAGAGCTTAATCGAAG AAACCGAGTTTCAGTTCACAAATACATGATATAATTGTCAGTGAACTGTG