Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0672700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:27179323:27184026:-1 gene:Os11g0672700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:RecQ DNA helicase, RNA silencing (Os11t0672700-01)
Sequence	ATGGCGGGGTACGAGAGGGAGAAGAAGCGGCTGCTCGACCTGGCCGCTGACTCCGGCTTC GAGCGCGACCTCGCCGCCGACTGCCTCGACAGGATCGTCCGCCTCTACGGAGAGGGCGGA CAAGGTTTTATTACCGTGGAGAACTGTGGAGACGATTTCCTTGGCGCATTGGCTGATGCA ACAAACAATAATGATGATTGGGATGATCTCAATGCTATAGAGAATGAAGCTTGTGGCAAT TTGAATGGCATGATGAAGCACGGTGTAATTGATGATAAAGAAGTTGAGGTGAGAACTCCT TTGTTCAGACAGGCAGAATCCTCTGCTCGACAGACTCGCATCAATCTGGACTCCTTCGGG TTCTCCTCAGATGATGACTTTGAAACGTTGGAGTCCCATTGTGATCGTTCAGTCAGTACC CAGAAGAAGGTGAACAGAGGAAACAATAGATGTGAGTCATCCACTTCAACTTCAAACAGA GAAACTCTAAGTTATCAGCAGCTGTATAGCCTAGATGACATCAATTTTGCAAACGTTGTC ATCTTTGGCAACAAAAGCTTTAGGCCCCTGCAGTATGAGGCCTGTAGGGCTGCAGTAAGC AACATGGACACCTTTGTGCTTATGCCAACAGGTGGTGGGAAGAGCTTGTGTTATCAGCTA CCTGCAACACTGCACCCAGGTGTTACGGTTGTTGTATGCCCTCTACTGTCACTTATTGAG GATCAAATTGTGGCATTAAACTTCAAGTTTGCTATACCAGCAGCATTTTTGAACTCTCAG CAGACACCTTCACAGTCATCTGCAGTAATCCAAGAGCTTAGAAGTGGTAAACCGTCATTC AAACTCCTCTACGTCACTCCTGAAAGAATGGCTGGAAACAGCTCATTTATTGGGATCCTC ATAGGTTTACACCAGAGGGGTTTACTGGCGAGATTTGTGATTGATGAAGCCCATTGTGTA AGTCAATGGGGACATGACTTCCGCCCAGATTACCGAGGCCTGGGATGCCTCAAACAGAAC TTCCCTCGAGTACCAATTATGGCTTTAACAGCTACAGCGACTGCATCTGTCTGCAAGGAC ATACTAAGTACCTTGAGGATCCCTAATGCAACGGTACTCAAGAGGAGCTTTGACAGAACA AACCTGAATTATGAGGTGATTGGCAAGACAAAAACTCCACAGAAGCAGCTGGGTGATCTC CTAAAAGAGCGTTTCATGAACATGTCTGGTATCGTGTACTGTCTGTCCAAAAATGAATGT GCTGACACTGCCAAGTTCTTGAGGGAGAAGTACAAGATAAAATGCGCACATTACCACGCT GGCTTGGCTGCTCGTCAACGATCCAATGTACAAGGAAAATGGCACAGCGGAGAGGTCAAA GTCATTTGTGCGACCATAGCATTTGGCATGGGAATAGACAAACCTGATGTGCGCTTTGTT ATCCACAACACCATGTCAAAATCGATAGAAAGCTACTATCAGGAGTCAGGGAGAGCAGGA AGAGACAATCTTCCGGCACATTGCATTGTGTTATATCAGAAAAAGGACCTCGGTCGAATT GTATGCATGCTGAGGAATTCAGGGAACTTCAAGAGTGAGAGCTTCAAGGTTGCAATGGAG CAAGCAAAGAAAATGCAAACATATTGCGAGCTGAAGACAGAATGCCGGAGGCAAACTCTT CTTGGCCACTTCGGTGAGCAGTATGACAGGCAAAGGTGCAAACATGGTTGTAGCCCTTGC GACAACTGCATAAAGATTCCCTCTTGA

Peptide Sequence

PEP ID	Os11t0672700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:27179323:27184026:-1 gene:Os11g0672700 transcript:Os11t0672700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:RecQ DNA helicase, RNA silencing (Os11t0672700-01)
Sequence	MAGYEREKKRLLDLAADSGFERDLAADCLDRIVRLYGEGGQGFITVENCGDDFLGALADA TNNNDDWDDLNAIENEACGNLNGMMKHGVIDDKEVEVRTPLFRQAESSARQTRINLDSFG FSSDDDFETLESHCDRSVSTQKKVNRGNNRCESSTSTSNRETLSYQQLYSLDDINFANVV IFGNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLHPGVTVVVCPLLSLIE DQIVALNFKFAIPAAFLNSQQTPSQSSAVIQELRSGKPSFKLLYVTPERMAGNSSFIGIL IGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCLKQNFPRVPIMALTATATASVCKD ILSTLRIPNATVLKRSFDRTNLNYEVIGKTKTPQKQLGDLLKERFMNMSGIVYCLSKNEC ADTAKFLREKYKIKCAHYHAGLAARQRSNVQGKWHSGEVKVICATIAFGMGIDKPDVRFV IHNTMSKSIESYYQESGRAGRDNLPAHCIVLYQKKDLGRIVCMLRNSGNFKSESFKVAME QAKKMQTYCELKTECRRQTLLGHFGEQYDRQRCKHGCSPCDNCIKIPS

Transcript Sequence

Transcript ID	Os11t0672700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:27179323:27184026:-1 gene:Os11g0672700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:- description:RecQ DNA helicase, RNA silencing (Os11t0672700-01)
Sequence	TTTTTTTTTGCCCCTCTCTCCGGCGACCGGCGCTAGGGTTTCCTCCATTCGGCGGGGCGG AGGTGGGGCGCGCTCGCCGGAGATGGCGGGGTACGAGAGGGAGAAGAAGCGGCTGCTCGA CCTGGCCGCTGACTCCGGCTTCGAGCGCGACCTCGCCGCCGACTGCCTCGACAGGATCGT CCGCCTCTACGGAGAGGGCGGACAAGGTTTTATTACCGTGGAGAACTGTGGAGACGATTT CCTTGGCGCATTGGCTGATGCAACAAACAATAATGATGATTGGGATGATCTCAATGCTAT AGAGAATGAAGCTTGTGGCAATTTGAATGGCATGATGAAGCACGGTGTAATTGATGATAA AGAAGTTGAGGTGAGAACTCCTTTGTTCAGACAGGCAGAATCCTCTGCTCGACAGACTCG CATCAATCTGGACTCCTTCGGGTTCTCCTCAGATGATGACTTTGAAACGTTGGAGTCCCA TTGTGATCGTTCAGTCAGTACCCAGAAGAAGGTGAACAGAGGAAACAATAGATGTGAGTC ATCCACTTCAACTTCAAACAGAGAAACTCTAAGTTATCAGCAGCTGTATAGCCTAGATGA CATCAATTTTGCAAACGTTGTCATCTTTGGCAACAAAAGCTTTAGGCCCCTGCAGTATGA GGCCTGTAGGGCTGCAGTAAGCAACATGGACACCTTTGTGCTTATGCCAACAGGTGGTGG GAAGAGCTTGTGTTATCAGCTACCTGCAACACTGCACCCAGGTGTTACGGTTGTTGTATG CCCTCTACTGTCACTTATTGAGGATCAAATTGTGGCATTAAACTTCAAGTTTGCTATACC AGCAGCATTTTTGAACTCTCAGCAGACACCTTCACAGTCATCTGCAGTAATCCAAGAGCT TAGAAGTGGTAAACCGTCATTCAAACTCCTCTACGTCACTCCTGAAAGAATGGCTGGAAA CAGCTCATTTATTGGGATCCTCATAGGTTTACACCAGAGGGGTTTACTGGCGAGATTTGT GATTGATGAAGCCCATTGTGTAAGTCAATGGGGACATGACTTCCGCCCAGATTACCGAGG CCTGGGATGCCTCAAACAGAACTTCCCTCGAGTACCAATTATGGCTTTAACAGCTACAGC GACTGCATCTGTCTGCAAGGACATACTAAGTACCTTGAGGATCCCTAATGCAACGGTACT CAAGAGGAGCTTTGACAGAACAAACCTGAATTATGAGGTGATTGGCAAGACAAAAACTCC ACAGAAGCAGCTGGGTGATCTCCTAAAAGAGCGTTTCATGAACATGTCTGGTATCGTGTA CTGTCTGTCCAAAAATGAATGTGCTGACACTGCCAAGTTCTTGAGGGAGAAGTACAAGAT AAAATGCGCACATTACCACGCTGGCTTGGCTGCTCGTCAACGATCCAATGTACAAGGAAA ATGGCACAGCGGAGAGGTCAAAGTCATTTGTGCGACCATAGCATTTGGCATGGGAATAGA CAAACCTGATGTGCGCTTTGTTATCCACAACACCATGTCAAAATCGATAGAAAGCTACTA TCAGGAGTCAGGGAGAGCAGGAAGAGACAATCTTCCGGCACATTGCATTGTGTTATATCA GAAAAAGGACCTCGGTCGAATTGTATGCATGCTGAGGAATTCAGGGAACTTCAAGAGTGA GAGCTTCAAGGTTGCAATGGAGCAAGCAAAGAAAATGCAAACATATTGCGAGCTGAAGAC AGAATGCCGGAGGCAAACTCTTCTTGGCCACTTCGGTGAGCAGTATGACAGGCAAAGGTG CAAACATGGTTGTAGCCCTTGCGACAACTGCATAAAGATTCCCTCTTGAGAGAACCTCTT CCAAACCTACTGCTGTGTGCTGACATCTATGGTCTTGGTAGAAGGTCACTTCCTGAGAGC CATTCTTACTTATGATTTGGCCTTAGCACCGGAAGTACTGCCTGAATGAAAGCAAATGCT GTCCTTGTTGTAAGATGCTTGACATTTTTATCCTGCAGACATTGCGCACGAGAGAAATCA TTACTATTTGCATGAGAAGTCTTCATTACATT