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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0671000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:27116506:27118000:-1 gene:Os11g0671000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin repressed protein 1 description:Similar to Dormancy-associated protein. (Os11t0671000-01)
Sequence

ATGCTGGAGAAGCTGTGGGACGACGTGGTGGCCGGGCCTCGACCGGAGACCGGCCTGGAG
AAGCTCCGCAAGGCCGCTACAACCCGCCCCCTTGTCATCAACAAAGATGGCGACGGCGAG
GCGAGCGGGGCGGCGTACAAGCGGACGCAGTCGATGCCGACGACCCCGACGACGCCGGTG
ACGCCGTCGTCTTCGTCTCCGACGACGACGGCGACGACGACGCCGCGGGGCAGCAACGTG
TGGAGGAGCGTGTTCCACCCGGGGAGCAACCTCGCCACCAAGAGCCTCGGCGCCAACCTC
TTCGACCGCCCGCAGCCCAACTCCCCCACCGTCTACGACTGGCTGTACAGCGACGAGACC
AGGAGCAGCCATCGCTGA

Peptide Sequence

PEP ID

Os11t0671000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:27116506:27118000:-1 gene:Os11g0671000 transcript:Os11t0671000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin repressed protein 1 description:Similar to Dormancy-associated protein. (Os11t0671000-01)
Sequence

MLEKLWDDVVAGPRPETGLEKLRKAATTRPLVINKDGDGEASGAAYKRTQSMPTTPTTPV
TPSSSSPTTTATTTPRGSNVWRSVFHPGSNLATKSLGANLFDRPQPNSPTVYDWLYSDET
RSSHR

Transcript Sequence

Transcript ID

Os11t0671000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:27116506:27118000:-1 gene:Os11g0671000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin repressed protein 1 description:Similar to Dormancy-associated protein. (Os11t0671000-01)
Sequence

ACTTGGGAGGCAGTGAGTTGTTGTAAAGTTGCAAGAGAGAGATCAGTTGTTGAGTGCGTG
GAAGCAGAGATCAGGAAGATGCTGGAGAAGCTGTGGGACGACGTGGTGGCCGGGCCTCGA
CCGGAGACCGGCCTGGAGAAGCTCCGCAAGGCCGCTACAACCCGCCCCCTTGTCATCAAC
AAAGATGGCGACGGCGAGGCGAGCGGGGCGGCGTACAAGCGGACGCAGTCGATGCCGACG
ACCCCGACGACGCCGGTGACGCCGTCGTCTTCGTCTCCGACGACGACGGCGACGACGACG
CCGCGGGGCAGCAACGTGTGGAGGAGCGTGTTCCACCCGGGGAGCAACCTCGCCACCAAG
AGCCTCGGCGCCAACCTCTTCGACCGCCCGCAGCCCAACTCCCCCACCGTCTACGACTGG
CTGTACAGCGACGAGACCAGGAGCAGCCATCGCTGAACTAAATAATCCCATTGATCGGAG
GCTGGTCGATCTCTCTGTCACGCCACGTTTGCTGGTCCTTGTGGTTATCTAATACGTAAT
TAATTATCTAGTATGTTGCTATCTTATCTTGTTACTCTGTTCCTAGTAGCTTGCTGTCTC
TGTTAGTACTACCAGAGACCGGTACGTGTCAGCTAGCCTGCTGGCTCCTATCAAGGGCTA
GCGACAACCCAAAGAAGTGTGTTTGTGTGTAAACATCTTCCATGTGTAAATACTGCCATG
TGTTTCCCTACTTTCAGCGTTTAATTACCTTTGATGTGATAATACCAATACCAGCTTGAG
ATATTTCTTCTTGGTTGCAAT