Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0661200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:26542837:26549299:1 gene:Os11g0661200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C78 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os11t0661200-01)
Sequence	ATGGAGGGCATCGAGGGGCTCCTGGCGGACTTCGGCGTGCGGCCGCAGGGGAAGGCCGCG CCCATGGCCGCCTCCCGCTCCCGCTCCACCACCACCACCGGATCCGCCTGGCCCAACCCT AGATCCACCCCAGCGCCCGCGCCGTCCTACGACGGGCTCTTCGGCGCGCCCCCCTCCGCG GCCGCCACCACCACCACCTCCTCCCCGTTCGACTCGCTGTTCAATGGCCCTCCTACTTCC TCCTCCTCCTCGTCGTCGGCGGCGGCGAGGGCCACGGTGTACGACGACGACATCTTCGGC GCGGTCCCGGGGCTGAGGCCGAGCTCCAATTCGGCGTCCTCCTCCTCCGCGGCGCGGTAC GACGGCGACGACGTGTTTGGGGGTGGCCGGCGCGCGGCGGCGTCCCCCGCGTTTGATGAC GTGTTCTCCAGCAACCGCTCGGCGGCGGCGCCTTCGTACGACGACATACTAGGTGGGTTC GGGGTGAAGCCGCAGGCGGGGGAGGAGAAGAGGTCGGTGGTGGTTGAGGACGACGACCTG CTCGGGGGGTTCGGGAGGAAGCCACATTCGGAGGCGGAGAAGAAGCCGGTGGTGGTGGAG AAGGCTAATGGGGGCAACGGATTCGATGATCTGATCCCGGGGTTCTCTGGGAGCGGCCCG CAGAGGAGTAGGAAGATTATTGATGATAACAAAGATGAGCCAGCAGTTCGAACTTCTAAA TCAACAGCCAGTGTATTAGATGATGACCCATTTGTTGTTCTAGAAACAAATTCTGCCTCA GGTTCAACATATCCATCCCCTAGCAGCTTCATGGATCCCTTGGAACATCTGAATAATTCT GCAAGCTCTAAAGGCAAGAATGTTGATAATACTACTGATAATGATAGTCTGCCTGATGAT TCAAGTGCCTTTAACCAGGTTCCAAAATCAGATCCTTTGTTTACCTCAGAATTCAATGGT GATACAAAGTATATGAATCCACCAAGCAAAGCCCGAGACTCAAACCCTCTACATGGTTCA ATGAATGGAAATTCAGCACGGGGATCTTCTACGGAGGACTTAGGAGATGCCAAGACAAAG TCACAGTCTGCAAGGTACTCTGATATTTATGTCGATGGCTCAAGTTCAGACAGATATGCT ACTGATGGCGTTGGGGATCAGTCACCAAGATCTACTGAATCCGAAGATGACATATGGCTT ACAGTTTCTGAAATTCCCCTCTTCACACAGCCAACTAATGCTCCACCGCCCTCAAGATCA CCACCTCTTCTTAAACAAAGACCTCTGCAAGCAAAAGCTAATGGTAATTATGATGGGTAT GTGCGGCAATCAAACCAAAATCACAACCAATACAGAGACATGCCAGATCAAGCAGAGGTT TCTTCACTAGATGAGATGGAAGGTTTTGCGAAGGACAAGTCCCAAATGCCTTCTTATGAC GACAATTTTTTTGGTGAAGCTGAACAATCTGAAAGAACTTCATCAGATCGTGAAGAGAAA GAGAGGCAGGCCAGATTGGAGCAGGAACAGGAAATGAAACTGATGGAGGAAAAGAAGAGA GAACAGAGACGACTTGAAAAGGAGAGAGAATTGGAACAGCAGAAAGAAAGAGAAAGACAA GCCATGGAGAGGGCCACAAAGGAGGCCCGAGAGAGAGCATCTGCTGAAGCTCGTGCAAAG GCTGAAAGGGAGGCCACCCAGCGTGCACAGCGCGCTGCTGTGCAAAGGGCTCAACAGGAA GCTCGTGAGAGGGCTGCAGCTGAGGCTAAAGAAAAAGCTGCAAGGATTGCTGCAGAAGCA AGGGAGAGGGCTGCATCTGAAGCCAAGGAGAGAGAGAGGGCTGCAGCAGAAAGAGCTGCT GCCGAGAGAGTTCAGCAAGAAGCAAGGAAGAGAGCTGAACGTGCTGCAGTGGAAAGAGCT GCTGCTGAGGCTCGGGAAAGACAGGCAGCTGCTGCAGCAGCTGCTGCTAGAGAAAAACAG AGCTCAGCAGATGATCTTGAGTCTTTCTTTGGTGCGGGTGCCCGAGCAAATAGTGCGCCA AAGCAGAGGACTCCAACAGTGGATTCTATGTTTGATTCTCAACCTCAATCTAGAGCAACC ACGAATGGATCACAGAGATCAGCCTCCACCTCAGCATCTATGAGAAAAGCCCCGTCAGCC ACAAATATTGGGGATGATCTATCTAATTTATTTGGAGCCCCTGCATCATCTGATGTATTC CAAGAAGTTGAGGGAGAGAGTGAAGAAAGAAGACGTGCTAGATTAGAACGCCATCAGAGG ACCCGTGAACGAGCGGCAAAAGCTCTGGCTGAGAAGAACGAACGGGATATGCAGGTTCAG AGGGAACAGGCAGAAAGAGACAGAATTGGGGACACACTAGACTTTGAAATCAGGAGGTGG GCAGCTGGAAAAGAGGGCAACTTACGTGCTTTGTTATCAACTTTACAATATATACTTTGG CCAGAATGTGGATGGCAAGCAGTATCCTTGACTGATTTGATTACTGGCGCCGCTGTTAAA AAGCAGTACAGAAAGGCAACATTATGCATCCATCCTGACAAGGTGCAACAGAAGGGTGCA AATCTTCAGCAGAAATATACTGCAGAGAAGGTGTTTGATATTCTTAAGGAGGCATGGAAC AAATTCAACTCTGAAGAGCTCTTTTAA

Peptide Sequence

PEP ID	Os11t0661200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:26542837:26549299:1 gene:Os11g0661200 transcript:Os11t0661200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C78 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os11t0661200-01)
Sequence	MEGIEGLLADFGVRPQGKAAPMAASRSRSTTTTGSAWPNPRSTPAPAPSYDGLFGAPPSA AATTTTSSPFDSLFNGPPTSSSSSSSAAARATVYDDDIFGAVPGLRPSSNSASSSSAARY DGDDVFGGGRRAAASPAFDDVFSSNRSAAAPSYDDILGGFGVKPQAGEEKRSVVVEDDDL LGGFGRKPHSEAEKKPVVVEKANGGNGFDDLIPGFSGSGPQRSRKIIDDNKDEPAVRTSK STASVLDDDPFVVLETNSASGSTYPSPSSFMDPLEHLNNSASSKGKNVDNTTDNDSLPDD SSAFNQVPKSDPLFTSEFNGDTKYMNPPSKARDSNPLHGSMNGNSARGSSTEDLGDAKTK SQSARYSDIYVDGSSSDRYATDGVGDQSPRSTESEDDIWLTVSEIPLFTQPTNAPPPSRS PPLLKQRPLQAKANGNYDGYVRQSNQNHNQYRDMPDQAEVSSLDEMEGFAKDKSQMPSYD DNFFGEAEQSERTSSDREEKERQARLEQEQEMKLMEEKKREQRRLEKERELEQQKERERQ AMERATKEARERASAEARAKAEREATQRAQRAAVQRAQQEARERAAAEAKEKAARIAAEA RERAASEAKERERAAAERAAAERVQQEARKRAERAAVERAAAEARERQAAAAAAAAREKQ SSADDLESFFGAGARANSAPKQRTPTVDSMFDSQPQSRATTNGSQRSASTSASMRKAPSA TNIGDDLSNLFGAPASSDVFQEVEGESEERRRARLERHQRTRERAAKALAEKNERDMQVQ REQAERDRIGDTLDFEIRRWAAGKEGNLRALLSTLQYILWPECGWQAVSLTDLITGAAVK KQYRKATLCIHPDKVQQKGANLQQKYTAEKVFDILKEAWNKFNSEELF

Transcript Sequence

Transcript ID	Os11t0661200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:26542837:26549299:1 gene:Os11g0661200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C78 description:Heat shock protein DnaJ, N-terminal domain containing protein. (Os11t0661200-01)
Sequence	AGAGCCAAGAGAGAGGGAGACGCGTCACCACCCTTCCCTTCCCACCACTTTCCTTCTCTC CTCCGATCTCCTCGCGCGAGTCTCCCGCCTTTCTCTCTCCCCTCCCCTCGTCGCCGGCGG ATTCTCCGGCGAGGTCGCCGCCGCCGGTGTCCGACCCCGCGGCGCCTCCCCCCCCTCGGC CCGTCCAATGGAGGGCATCGAGGGGCTCCTGGCGGACTTCGGCGTGCGGCCGCAGGGGAA GGCCGCGCCCATGGCCGCCTCCCGCTCCCGCTCCACCACCACCACCGGATCCGCCTGGCC CAACCCTAGATCCACCCCAGCGCCCGCGCCGTCCTACGACGGGCTCTTCGGCGCGCCCCC CTCCGCGGCCGCCACCACCACCACCTCCTCCCCGTTCGACTCGCTGTTCAATGGCCCTCC TACTTCCTCCTCCTCCTCGTCGTCGGCGGCGGCGAGGGCCACGGTGTACGACGACGACAT CTTCGGCGCGGTCCCGGGGCTGAGGCCGAGCTCCAATTCGGCGTCCTCCTCCTCCGCGGC GCGGTACGACGGCGACGACGTGTTTGGGGGTGGCCGGCGCGCGGCGGCGTCCCCCGCGTT TGATGACGTGTTCTCCAGCAACCGCTCGGCGGCGGCGCCTTCGTACGACGACATACTAGG TGGGTTCGGGGTGAAGCCGCAGGCGGGGGAGGAGAAGAGGTCGGTGGTGGTTGAGGACGA CGACCTGCTCGGGGGGTTCGGGAGGAAGCCACATTCGGAGGCGGAGAAGAAGCCGGTGGT GGTGGAGAAGGCTAATGGGGGCAACGGATTCGATGATCTGATCCCGGGGTTCTCTGGGAG CGGCCCGCAGAGGAGTAGGAAGATTATTGATGATAACAAAGATGAGCCAGCAGTTCGAAC TTCTAAATCAACAGCCAGTGTATTAGATGATGACCCATTTGTTGTTCTAGAAACAAATTC TGCCTCAGGTTCAACATATCCATCCCCTAGCAGCTTCATGGATCCCTTGGAACATCTGAA TAATTCTGCAAGCTCTAAAGGCAAGAATGTTGATAATACTACTGATAATGATAGTCTGCC TGATGATTCAAGTGCCTTTAACCAGGTTCCAAAATCAGATCCTTTGTTTACCTCAGAATT CAATGGTGATACAAAGTATATGAATCCACCAAGCAAAGCCCGAGACTCAAACCCTCTACA TGGTTCAATGAATGGAAATTCAGCACGGGGATCTTCTACGGAGGACTTAGGAGATGCCAA GACAAAGTCACAGTCTGCAAGGTACTCTGATATTTATGTCGATGGCTCAAGTTCAGACAG ATATGCTACTGATGGCGTTGGGGATCAGTCACCAAGATCTACTGAATCCGAAGATGACAT ATGGCTTACAGTTTCTGAAATTCCCCTCTTCACACAGCCAACTAATGCTCCACCGCCCTC AAGATCACCACCTCTTCTTAAACAAAGACCTCTGCAAGCAAAAGCTAATGGTAATTATGA TGGGTATGTGCGGCAATCAAACCAAAATCACAACCAATACAGAGACATGCCAGATCAAGC AGAGGTTTCTTCACTAGATGAGATGGAAGGTTTTGCGAAGGACAAGTCCCAAATGCCTTC TTATGACGACAATTTTTTTGGTGAAGCTGAACAATCTGAAAGAACTTCATCAGATCGTGA AGAGAAAGAGAGGCAGGCCAGATTGGAGCAGGAACAGGAAATGAAACTGATGGAGGAAAA GAAGAGAGAACAGAGACGACTTGAAAAGGAGAGAGAATTGGAACAGCAGAAAGAAAGAGA AAGACAAGCCATGGAGAGGGCCACAAAGGAGGCCCGAGAGAGAGCATCTGCTGAAGCTCG TGCAAAGGCTGAAAGGGAGGCCACCCAGCGTGCACAGCGCGCTGCTGTGCAAAGGGCTCA ACAGGAAGCTCGTGAGAGGGCTGCAGCTGAGGCTAAAGAAAAAGCTGCAAGGATTGCTGC AGAAGCAAGGGAGAGGGCTGCATCTGAAGCCAAGGAGAGAGAGAGGGCTGCAGCAGAAAG AGCTGCTGCCGAGAGAGTTCAGCAAGAAGCAAGGAAGAGAGCTGAACGTGCTGCAGTGGA AAGAGCTGCTGCTGAGGCTCGGGAAAGACAGGCAGCTGCTGCAGCAGCTGCTGCTAGAGA AAAACAGAGCTCAGCAGATGATCTTGAGTCTTTCTTTGGTGCGGGTGCCCGAGCAAATAG TGCGCCAAAGCAGAGGACTCCAACAGTGGATTCTATGTTTGATTCTCAACCTCAATCTAG AGCAACCACGAATGGATCACAGAGATCAGCCTCCACCTCAGCATCTATGAGAAAAGCCCC GTCAGCCACAAATATTGGGGATGATCTATCTAATTTATTTGGAGCCCCTGCATCATCTGA TGTATTCCAAGAAGTTGAGGGAGAGAGTGAAGAAAGAAGACGTGCTAGATTAGAACGCCA TCAGAGGACCCGTGAACGAGCGGCAAAAGCTCTGGCTGAGAAGAACGAACGGGATATGCA GGTTCAGAGGGAACAGGCAGAAAGAGACAGAATTGGGGACACACTAGACTTTGAAATCAG GAGGTGGGCAGCTGGAAAAGAGGGCAACTTACGTGCTTTGTTATCAACTTTACAATATAT ACTTTGGCCAGAATGTGGATGGCAAGCAGTATCCTTGACTGATTTGATTACTGGCGCCGC TGTTAAAAAGCAGTACAGAAAGGCAACATTATGCATCCATCCTGACAAGGTGCAACAGAA GGGTGCAAATCTTCAGCAGAAATATACTGCAGAGAAGGTGTTTGATATTCTTAAGGAGGC ATGGAACAAATTCAACTCTGAAGAGCTCTTTTAAACCATCCACCATATGAATGGATATAA ATGTTCAGCCTAACTATACCCACATGAAGAACTGGAGGAACAAAGCAGAGAAACGGTGCA GTGATCAAGTGAAAACTCTGCTATAATTACAGTACTATCATTGTTTCGTTCTTACACCCT TACCATTGTGTTTTGCTCTCATGATCGTATTTGTTCACTCCATTATACTTCGAATCTTCA AGACTTGTACTTATACCTCACACGGGCAACGGCGGCGGTGTACATGGATGTAGCTTCTTC TTCTTCTTCTTCTGTTCATTGGATTAGTAATGGCACGGTTCTTTGGGAAGGCTTTTATAC AAGCATATTAATAGGGTAAAGATACGTGTACAAAAAATTCTTTTACAAATACTTTACAAA TGTTATTGTGGACCGCTGTATTGAATCTTGATTCCTATAGCTTTCTAACTGATTAAATCC AATGGTTGAGAATTTTGTTTGC