Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0661000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:26527937:26531006:-1 gene:Os11g0661000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0661000-01);Pentatricopeptide repeat domain containing protein. (Os11t0661000-02);Non-protein coding transcript. (Os11t0661000-03)
Sequence	ATGACCCATAGGCAGGCGACACCGCGGCGGCGCGGCAGCAGAGCGCTGCACGACCTCCGC CTCCCCAATCCGCCCCGTCTCCTTGCCCGCCGCCCCCCGACTCCCGCCGATCTCCATCCT GCTAGCAGAGGTGGCCCGGCGTTCTCCTGCTCCCTCACTGGAGGCGAAAGAAGGAGAATT ATTGATCAATCAATTCAGAACGAACGGCTCAGATATTGGGGAGGAAGACACGAAGCGGAC CTATGCATGCTCTCTCCGGCCGCCACCGCTGTAGCCGCCGTCCGTGCCACGGCGGGGTCG CCGGCGGCCGTGCGCGGCATGCACGCGCGCATCCTCAAGGAAGGTCTGGCCCACCACCCT CCGAACCCCGCGGCGCTCGTCTCCGCCTATGCCAAGTCCCGCCTCCTCCCTGACGCCCTC CACCTGTTCGACGAAACCCCGCGCCGGGACATCTACATCTACTCCTCGCTCCTCACTGCC GTCTCCCACTCCGCGTCCCCCGAGCTCGCGCTGCCGATCCTCCGCTGCATGCTCTCCGCC GACGCCCTCCACCCCGACCACTTCGTGATCAGCTCCGTTGCCAGCGTCTTCGCCAGGCTC CGTAGCCGCCGCCTTGGCAGGCAGCTGCACGCGCATTTCGTGGTATCCCCATACAACGGG GATGACGTCGTCAAGTCCTCTCTGGTCGACATGTACTGCAAGTGTGGCTCCCCGGACGAT GGCAGGAAGGTGTTCGACAGTATGAGTGCCAAGAACAGCGTTGTGTGGACTGCCCTGGTT TCTGGGTACGCGTCCAACGGCCGCAGTGAGGAGGCGCTGCAGCTATTCCGTAGCATGCCT GGGCGCAATCTGTTTGCATGGACTGCGCTCATCTCGGGGCTAGTGAACACCGGTGAGAGT GTCGGCGCAGTGGAGCTTTTTGTTGAGATGAGGCGGGATGGTGTTAGGATTGATGATGCA TTCGTGCTGTCGATCGTCATTGGCGGTTCTGCAGACCTGGCTGCTTTTGTGCTGGGTAGG CAGTTGCATGGTTCCACAATGAGGCTTGGGTTCCTGTCCAACATGATTGTTGGGAATGCG TTGATTGACATGTACTCGAAATGCAGTGATATACTCTCTGCTAGAGAAGTATTTGAGGGG ATTACATTCCGTGATGTAATCTCGTGGACGACAATGGTTGTTGGAGAGGCACAGCATGGT CGAGCTGAGGAGGCATTGGCTCTTTATGACAGGATGGTTCTTGCAGGAGCGAAGCCCAAC GAGGTGACCTTTGTCGGGTTGATCTATGCTTGTAGCCATGCTGGTCTTGTTCAGAAAGGG CGACAGCTTTTTGAGTCAATGAAGAATGAGTATGGCATCACTCCTAGATTGCAGCACTAC ACGTGTTATCTGGATCTTCTTAGTCGCTCAGGCCATTTATTGGAAGCTGAAGAGCTAATG ACTACAATGCCATATGAGCCTGATGAAGCTACTTGGGGGGCCCTGTTGAGCGCATGTACG AAGTACAAGGATGCTGAAATGTGTATCAGGATTTCCGATAAACTATTAGAGCTACGACCA AAAGATTCTTCCACATATATCTTGTTATCTAATGTTTATGCAGTGAACGGAAAGTGGGAT TCCGTAGCCAAGGTTAGAAAGTGCATGATTGGATTGGAGATAAGAAAAGAGCCAGGGTAT AGCTGGATTGAAGCTGGAAGAGAATTCCGTTTGTTTCATGCTGGGGAAGTGCCACTTGAT GTTAGAGAAGAAATTATGGTTTTTCTTGAGGAAATGGTATTGGAGATGCGCAAAAGGGGT TATGTTCCTGATACTAGTTCTGTGATGCATGACTTGGAAGAAAGCGAAAAGGAGCACCAT CTCTTCTTGCACAGCGAGAGATTGGCTGTTGCTTTTGGATTAATCAAGTCTCCTCCAGGG TCTGTGATCCGGGTGGTGAAGAACCTTCGGGTCTGTGTGGACTGCCATACAGTAATGAAG TTAATTAGTGAAATAACCCATCGGAAGATCGTTGTGCGAGATTCTAGTCGTTTTCACCAT TTTGAAGGTGGAAAATGCTCTTGTAGTGAATTCTGGTAG

Peptide Sequence

PEP ID	Os11t0661000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:26527937:26531006:-1 gene:Os11g0661000 transcript:Os11t0661000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0661000-01);Pentatricopeptide repeat domain containing protein. (Os11t0661000-02);Non-protein coding transcript. (Os11t0661000-03)
Sequence	MTHRQATPRRRGSRALHDLRLPNPPRLLARRPPTPADLHPASRGGPAFSCSLTGGERRRI IDQSIQNERLRYWGGRHEADLCMLSPAATAVAAVRATAGSPAAVRGMHARILKEGLAHHP PNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSASPELALPILRCMLSA DALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDD GRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGES VGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNA LIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPN EVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELM TTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWD SVAKVRKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRG YVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMK LISEITHRKIVVRDSSRFHHFEGGKCSCSEFW

Transcript Sequence

Transcript ID	Os11t0661000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:26527937:26531006:-1 gene:Os11g0661000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0661000-01);Pentatricopeptide repeat domain containing protein. (Os11t0661000-02);Non-protein coding transcript. (Os11t0661000-03)
Sequence	ATATGACCCATAGGCAGGCGACACCGCGGCGGCGCGGCAGCAGAGCGCTGCACGACCTCC GCCTCCCCAATCCGCCCCGTCTCCTTGCCCGCCGCCCCCCGACTCCCGCCGATCTCCATC CTGCTAGCAGAGGTGGCCCGGCGTTCTCCTGCTCCCTCACTGGAGGCGAAAGAAGGAGAA TTATTGATCAATCAATTCAGAACGAACGGCTCAGATATTGGGGAGGAAGACACGAAGCGG ACCTATGCATGCTCTCTCCGGCCGCCACCGCTGTAGCCGCCGTCCGTGCCACGGCGGGGT CGCCGGCGGCCGTGCGCGGCATGCACGCGCGCATCCTCAAGGAAGGTCTGGCCCACCACC CTCCGAACCCCGCGGCGCTCGTCTCCGCCTATGCCAAGTCCCGCCTCCTCCCTGACGCCC TCCACCTGTTCGACGAAACCCCGCGCCGGGACATCTACATCTACTCCTCGCTCCTCACTG CCGTCTCCCACTCCGCGTCCCCCGAGCTCGCGCTGCCGATCCTCCGCTGCATGCTCTCCG CCGACGCCCTCCACCCCGACCACTTCGTGATCAGCTCCGTTGCCAGCGTCTTCGCCAGGC TCCGTAGCCGCCGCCTTGGCAGGCAGCTGCACGCGCATTTCGTGGTATCCCCATACAACG GGGATGACGTCGTCAAGTCCTCTCTGGTCGACATGTACTGCAAGTGTGGCTCCCCGGACG ATGGCAGGAAGGTGTTCGACAGTATGAGTGCCAAGAACAGCGTTGTGTGGACTGCCCTGG TTTCTGGGTACGCGTCCAACGGCCGCAGTGAGGAGGCGCTGCAGCTATTCCGTAGCATGC CTGGGCGCAATCTGTTTGCATGGACTGCGCTCATCTCGGGGCTAGTGAACACCGGTGAGA GTGTCGGCGCAGTGGAGCTTTTTGTTGAGATGAGGCGGGATGGTGTTAGGATTGATGATG CATTCGTGCTGTCGATCGTCATTGGCGGTTCTGCAGACCTGGCTGCTTTTGTGCTGGGTA GGCAGTTGCATGGTTCCACAATGAGGCTTGGGTTCCTGTCCAACATGATTGTTGGGAATG CGTTGATTGACATGTACTCGAAATGCAGTGATATACTCTCTGCTAGAGAAGTATTTGAGG GGATTACATTCCGTGATGTAATCTCGTGGACGACAATGGTTGTTGGAGAGGCACAGCATG GTCGAGCTGAGGAGGCATTGGCTCTTTATGACAGGATGGTTCTTGCAGGAGCGAAGCCCA ACGAGGTGACCTTTGTCGGGTTGATCTATGCTTGTAGCCATGCTGGTCTTGTTCAGAAAG GGCGACAGCTTTTTGAGTCAATGAAGAATGAGTATGGCATCACTCCTAGATTGCAGCACT ACACGTGTTATCTGGATCTTCTTAGTCGCTCAGGCCATTTATTGGAAGCTGAAGAGCTAA TGACTACAATGCCATATGAGCCTGATGAAGCTACTTGGGGGGCCCTGTTGAGCGCATGTA CGAAGTACAAGGATGCTGAAATGTGTATCAGGATTTCCGATAAACTATTAGAGCTACGAC CAAAAGATTCTTCCACATATATCTTGTTATCTAATGTTTATGCAGTGAACGGAAAGTGGG ATTCCGTAGCCAAGGTTAGAAAGTGCATGATTGGATTGGAGATAAGAAAAGAGCCAGGGT ATAGCTGGATTGAAGCTGGAAGAGAATTCCGTTTGTTTCATGCTGGGGAAGTGCCACTTG ATGTTAGAGAAGAAATTATGGTTTTTCTTGAGGAAATGGTATTGGAGATGCGCAAAAGGG GTTATGTTCCTGATACTAGTTCTGTGATGCATGACTTGGAAGAAAGCGAAAAGGAGCACC ATCTCTTCTTGCACAGCGAGAGATTGGCTGTTGCTTTTGGATTAATCAAGTCTCCTCCAG GGTCTGTGATCCGGGTGGTGAAGAACCTTCGGGTCTGTGTGGACTGCCATACAGTAATGA AGTTAATTAGTGAAATAACCCATCGGAAGATCGTTGTGCGAGATTCTAGTCGTTTTCACC ATTTTGAAGGTGGAAAATGCTCTTGTAGTGAATTCTGGTAGAAGGTCTGCTGATGTCCAG TTGTGCTTCCAGTCTTCTAGAACTCTAGGTATGACATAAGCTATTGCTTT