Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0660300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:26501646:26504211:1 gene:Os11g0660300 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat-like domain containing protein. (Os11t0660300-01)
Sequence

ATGAAGCTCGCGGGGCTCAAGTCGGTGGACGGGGCCCACGAGGAGTCCATCTGGGCGGCG
GCGTGGGTGCCCGCGGCGGACCACCGCCCCGCGGCGCTGCTCCTGACGGGCGCCCTCGAC
GAGACCGTCCGCCTCTGGGCCCCCGACGACCTCGCCTCCGCCGCCGCCTCCCCCTCGCGG
GGCCACGCGCTCGGGGTGGTGTCGCTCGCCGCCCACCCCGCGGGCGCCGTCGCCGCCGCC
GTCTCCCTCGACAGCTACGTCCGCGTCTTCGATGTGGACTCGGGCTCCTCCGTCGCCACG
CTCGAGGCCCCTCCCTCCGAGGTCTGGGGCATCCAGTTCCACCCCAAGGGTAGTGCTCTG
GCTGCAGCTGGTGGTGGCAGTGGATCAGTGAAGCTCTGGGACACAGAGAAGTGGAAGCCA
ATTACCAGCCTTGCTGTTCCGCGTCCAGAGGGAGCTCGCCCTGATAAAACAGGAAGCGGC
AAGTTTGTCCTTTCAGTTGCATGGAGTCCTGATGGCAAGCTCTTAGCTTGTGGTTCCATG
GATGGCACCATCGCTGTGTATGACGCAGTTCGCATGAAGTTCCTCCACCACCTTGAGGGC
CATCACATGCCAGTGAGATCAATGGTGTTCTCTCCAGTGGACCCGCACGTGCTCTTCACT
GCCTCCGACGATTGCCACATCCACATATACGACGCCAAGGAGAAGAGCCTCATTGGGGCC
ATGTCAGGGCATGCGAGCTGGGTGCTGAGCATCGACGTGAGCCCAGACGGCATGGCGGTA
GCGACAGGCTCCAGTGACCGCACGGTCCGGCTTTGGGACATCAACACGAGGGCGTCGGTG
CAGACGATGAGCAACCACAATGATCAGGTCTGGGCTGTCGCCTTCCGACCACCGGGTGGG
ACAGGAGTCCGCGCAGGCCGGCTTGCCAGCGTGTCAGATGACAAGAGCATCACCCTGTAC
GATTACTCATAG

Peptide Sequence

PEP ID

Os11t0660300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:26501646:26504211:1 gene:Os11g0660300 transcript:Os11t0660300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat-like domain containing protein. (Os11t0660300-01)
Sequence

MKLAGLKSVDGAHEESIWAAAWVPAADHRPAALLLTGALDETVRLWAPDDLASAAASPSR
GHALGVVSLAAHPAGAVAAAVSLDSYVRVFDVDSGSSVATLEAPPSEVWGIQFHPKGSAL
AAAGGGSGSVKLWDTEKWKPITSLAVPRPEGARPDKTGSGKFVLSVAWSPDGKLLACGSM
DGTIAVYDAVRMKFLHHLEGHHMPVRSMVFSPVDPHVLFTASDDCHIHIYDAKEKSLIGA
MSGHASWVLSIDVSPDGMAVATGSSDRTVRLWDINTRASVQTMSNHNDQVWAVAFRPPGG
TGVRAGRLASVSDDKSITLYDYS

Transcript Sequence

Transcript ID

Os11t0660300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:26501646:26504211:1 gene:Os11g0660300 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD40 repeat-like domain containing protein. (Os11t0660300-01)
Sequence

AAAACCCACGAACCCCTCGTCTCTCTCACTCCCCTCCCCAACCAGATCAAACGCTAGGGT
TTCCTCGACTTCGACTTCGTCTTCCTCCTCGAGCAGAGCAGCAGCAGAGATGAAGCTCGC
GGGGCTCAAGTCGGTGGACGGGGCCCACGAGGAGTCCATCTGGGCGGCGGCGTGGGTGCC
CGCGGCGGACCACCGCCCCGCGGCGCTGCTCCTGACGGGCGCCCTCGACGAGACCGTCCG
CCTCTGGGCCCCCGACGACCTCGCCTCCGCCGCCGCCTCCCCCTCGCGGGGCCACGCGCT
CGGGGTGGTGTCGCTCGCCGCCCACCCCGCGGGCGCCGTCGCCGCCGCCGTCTCCCTCGA
CAGCTACGTCCGCGTCTTCGATGTGGACTCGGGCTCCTCCGTCGCCACGCTCGAGGCCCC
TCCCTCCGAGGTCTGGGGCATCCAGTTCCACCCCAAGGGTAGTGCTCTGGCTGCAGCTGG
TGGTGGCAGTGGATCAGTGAAGCTCTGGGACACAGAGAAGTGGAAGCCAATTACCAGCCT
TGCTGTTCCGCGTCCAGAGGGAGCTCGCCCTGATAAAACAGGAAGCGGCAAGTTTGTCCT
TTCAGTTGCATGGAGTCCTGATGGCAAGCTCTTAGCTTGTGGTTCCATGGATGGCACCAT
CGCTGTGTATGACGCAGTTCGCATGAAGTTCCTCCACCACCTTGAGGGCCATCACATGCC
AGTGAGATCAATGGTGTTCTCTCCAGTGGACCCGCACGTGCTCTTCACTGCCTCCGACGA
TTGCCACATCCACATATACGACGCCAAGGAGAAGAGCCTCATTGGGGCCATGTCAGGGCA
TGCGAGCTGGGTGCTGAGCATCGACGTGAGCCCAGACGGCATGGCGGTAGCGACAGGCTC
CAGTGACCGCACGGTCCGGCTTTGGGACATCAACACGAGGGCGTCGGTGCAGACGATGAG
CAACCACAATGATCAGGTCTGGGCTGTCGCCTTCCGACCACCGGGTGGGACAGGAGTCCG
CGCAGGCCGGCTTGCCAGCGTGTCAGATGACAAGAGCATCACCCTGTACGATTACTCATA
GTTTTAACACTGCAACCTGCAACTTCATTGTAGTCAGCTGTTTCCAACTTGCATTGGAAA
AAAAAACCTGTTGTACAATCCTAATTAAGCTCATGAGTTGCAAGTAGAGTGCGTTTATTT
CCAGT