Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0659600-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:26475503:26478045:-1 gene:Os11g0659600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 32 description:Pectinesterase, catalytic domain containing protein. (Os11t0659600-01)
Sequence	ATGGCGACGACGAAGACGCAGCTTCTCATGAAGCTGGGGCTACTGCTGCTGGCGCTGGCG TCTCAGCCGTCGCCGTCGCAGCAGTCGCAGGCGTTCTTCGAGATCTGGCTGGGGCAGAAC TCGATGCAGTACGGCACGCCGACGATGGACACGCCGTCGATCGCCGGCGACATCGTCGCC GCCAACGCGACGGCGGTCCACGCGGCCGTCGACCCCGCCGGCGGCGGCAAGCAGTACCGC ACCATCGCCGACGCGCTCGCCGCCGTCCCCGACGCCAACAACACCAGGCGCTACGTGTTC AGGCTCAAGCCGGGGCAGGTGTTCCGCGAGAAGGTGGCCGTCGGCGAGGGCAAGCGGTAC GTCACCTTCGAGTCCGACCCGGCCAACCCCGCCGTCGTCGTCTGGAACAACACCGCCGCC ACCCCGGGCAAGGACGGCAAGCCCCTCGGCGCCGCCGGCAGCGCCATCGTCGCCATCGAA GCCTCCAACTTCATCGCCAATGGTGTCGTCTTCAAGAATGATGGGCCAACAGGGGGGAAG CAAGGGCAGACAGTGGCACTGCGGGTGGCAGAAAAAAGGGCATCATTCTTCAATTGCACG ATCGAGGGCGGACAAGGCGTGCTATACGACGAGATGGGGACACACTACTTCAGGAACTGC ACCATCAATGGCGGCGTCGACGCCATCTTCGGCTTCGGGAGGTCTTTCTACGACGATTGC CGCATCGATCTCCAAGCGAGACCCCGCCGTGCCCACGGCGCCAGCGACGTAGAAGAGGCC GCCCTCGCACACCAAGCAGATCAATTCTACCTGGAACGGCTTCGCCTTTCACAACTGCGT CATCGAGACCGGTGGCGCCGACGACAAGGTCTACCTCGGCAGGGCATGGGAGGACTCGTC GTTCGTCGCCTACACCTATAG

Peptide Sequence

PEP ID	Os11t0659600-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:26475503:26478045:-1 gene:Os11g0659600 transcript:Os11t0659600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 32 description:Pectinesterase, catalytic domain containing protein. (Os11t0659600-01)
Sequence	MATTKTQLLMKLGLLLLALASQPSPSQQSQAFFEIWLGQNSMQYGTPTMDTPSIAGDIVA ANATAVHAAVDPAGGGKQYRTIADALAAVPDANNTRRYVFRLKPGQVFREKVAVGEGKRY VTFESDPANPAVVVWNNTAATPGKDGKPLGAAGSAIVAIEASNFIANGVVFKNDGPTGGK QGQTVALRVAEKRASFFNCTIEGGQGVLYDEMGTHYFRNCTINGGVDAIFGFGRSFYDDC RIDLQARPRRAHGASDVEEAALAHQADQFYLERLRLSQLRHRDRWRRRQGLPRQGMGGLV VRRLHL

Transcript Sequence

Transcript ID	Os11t0659600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:26475503:26478045:-1 gene:Os11g0659600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 32 description:Pectinesterase, catalytic domain containing protein. (Os11t0659600-01)
Sequence	AAGAAGCTAACACGATCGATGAGATCATCATATATTATCGGGTGAAAAACGAATTGAAAT CGACATATCGATCATGGCGACGACGAAGACGCAGCTTCTCATGAAGCTGGGGCTACTGCT GCTGGCGCTGGCGTCTCAGCCGTCGCCGTCGCAGCAGTCGCAGGCGTTCTTCGAGATCTG GCTGGGGCAGAACTCGATGCAGTACGGCACGCCGACGATGGACACGCCGTCGATCGCCGG CGACATCGTCGCCGCCAACGCGACGGCGGTCCACGCGGCCGTCGACCCCGCCGGCGGCGG CAAGCAGTACCGCACCATCGCCGACGCGCTCGCCGCCGTCCCCGACGCCAACAACACCAG GCGCTACGTGTTCAGGCTCAAGCCGGGGCAGGTGTTCCGCGAGAAGGTGGCCGTCGGCGA GGGCAAGCGGTACGTCACCTTCGAGTCCGACCCGGCCAACCCCGCCGTCGTCGTCTGGAA CAACACCGCCGCCACCCCGGGCAAGGACGGCAAGCCCCTCGGCGCCGCCGGCAGCGCCAT CGTCGCCATCGAAGCCTCCAACTTCATCGCCAATGGTGTCGTCTTCAAGAATGATGGGCC AACAGGGGGGAAGCAAGGGCAGACAGTGGCACTGCGGGTGGCAGAAAAAAGGGCATCATT CTTCAATTGCACGATCGAGGGCGGACAAGGCGTGCTATACGACGAGATGGGGACACACTA CTTCAGGAACTGCACCATCAATGGCGGCGTCGACGCCATCTTCGGCTTCGGGAGGTCTTT CTACGACGATTGCCGCATCGATCTCCAAGCGAGACCCCGCCGTGCCCACGGCGCCAGCGA CGTAGAAGAGGCCGCCCTCGCACACCAAGCAGATCAATTCTACCTGGAACGGCTTCGCCT TTCACAACTGCGTCATCGAGACCGGTGGCGCCGACGACAAGGTCTACCTCGGCAGGGCAT GGGAGGACTCGTCGTTCGTCGCCTACACCTATAGCAAGATCGCCAATGAGATCGTGCCTA TTGGCTACGACGACCACGGGAACATCCAAAAGCCACCGAAAGGGAGCGGATTCTACTACG GTGTGTACAACTGCTCTGGGCCTGGATTGGATGCAAGCAAGAAGATGGGATGGGCCGAAG AAATCGCTGATAGCAACGTACCGTTTGCATATAGCTATTACGCTTTTGTCGATGGCGAAT CGTGGGTCGTGCCCAGGCCCGCGGACCATATCGAGATTCACATGTGATGATCCATATGCG TGAGGAATACCACCATATTGCCACACGATATATCTCGCACTTCGATGGTCTCATAAGTAC TTATCTGTAATGATAATGTATTTATAGC