Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0659400-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:26458433:26468058:1 gene:Os11g0659400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0659400-00)
Sequence	ATGGCTTATAACATGGTAATGGATGGACTATGCAAAGAAATGAGATTGGATGAGGCGGAA AAGCTCTTGGAAAACAAGGCCAGACAAGGATCCAACCCTGATGTATATGGTTATAGCTAT CTGATTCGGAGTTATTGCAAAATGGGCAACCTAATAAATGCTGTGGATCATTATGAAGCC ATGGTTTCTCATGGTATTGAGACAAATTGCCACATTGTGAGTTACCTTCTGCAATGCTTC AGGAAGTTAGGCATGACATCTGAAGCAATTGCGTATTTCCTGAAATTTAAAGATTCAGGG CTTCATCTTGACAAGGTGATTTATAACATTGCTATGGATACTTATTGCAAGAATGGGAAC ATGAACGAGGCAGTTAAGCTACTGAATGAAATGAAGTATGGGGGTTTGACACCTGACAAA ATTCACTACACATGCCTAATCAGTGGTTACTGTTTGAAGGGAGAAATGCAAAATGCACAG CAGGTATTTGAGGAAATGCTGAAGGCCAATATTGAGCCAGATATAGTTACATATAACATA TTGGCTAGTGGGTTTTGCAAGAGCGGTCTTGTTATGGAGGTGTTTGATCTTCTAGACCGT ATGGCAGATCAAGGTTTGGAGCCTAATTCACTCACCTATGGTATAGCAATTGTTGGATTT TGTAGAGGAGGCAACCTTAGTGAAGCAGAGGTTCTATTTAATGTAGTAGAAGAAAAAGGA ATTGATCATATCGAAGTGATGTACAGTTCGATGGTTTGTGGCTATTTGCTTTCAGGCTGG ACTGATCATGCTTACATGCTTTTTGTAAGGGTTGCTCGACAAGGAAATCTTGTGGATCAT TTTTCATGTTCTAAGTTGATAAATGACCTCTGTAGAGTTGGAAATGTCCAGGGGGCTTCA AATGTTTGTAAGATTATGTTAGAACATGATGTTGTACCTGATGTGATTTCATATAGCAAA CTCATATCAATCTATTGTCAGAATGGAGATATGGACAAAGCTCACTTATGGTTCCACGAT ATGGTTCAGCGAGGACTTTCTGTTGATGTTATTGTATACACTATACTGATGAATGGTTAC TGCAAGGCTGGTCGTCTGCAAGAAGCTTGTCAATTGTTTGTTCAAATGACAAACTTGGGC ATAAAGCCTGATGTGATTGCATATACAGTTCTACTGGATGGTCACTTAAAGGAGACCCTT CAGCAAGGTTGGGAGGGGATTGCTAAAGAGAGAAGGAGCTTTCTTCTTAGAGCGAATCAT AACAAGTTATTAAGCTCCATGAAAGACATGCAAATTGAACCTGATGTACCCTGTTACACG GTGTTGATTGATGGAAAGTGCAAAGCTGAATATCTAGTGGAAGCCCGGGAACTATTTGAT GAGATGTTGCAGAAAGGACTTACTCCTGATGCTTATGCTTACACAGCTCTTATAAATGGA TATTGTAGCCAAGGGGAAATATCAAAGGCTGAAGATCTTTTGCAAGAAATGATTGACAAG GGAATAGAACCAGATGAATTGACCTTTTCAGTATTAAATCAGAGTTCCTTGAGGTCTAGG AAGATTCAGTTCTGTGCATGA

Peptide Sequence

PEP ID	Os11t0659400-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:26458433:26468058:1 gene:Os11g0659400 transcript:Os11t0659400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0659400-00)
Sequence	MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEA MVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN MNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI LASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS NVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGY CKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANH NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING YCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKIQFCA

Transcript Sequence

Transcript ID	Os11t0659400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:26458433:26468058:1 gene:Os11g0659400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0659400-00)
Sequence	TGATTTAGCTTATGTTATTCTACAAGAGATTAATAGGGAGAAGGTTCCTGTTGAGGCCAT GGCTTATAACATGGTAATGGATGGACTATGCAAAGAAATGAGATTGGATGAGGCGGAAAA GCTCTTGGAAAACAAGGCCAGACAAGGATCCAACCCTGATGTATATGGTTATAGCTATCT GATTCGGAGTTATTGCAAAATGGGCAACCTAATAAATGCTGTGGATCATTATGAAGCCAT GGTTTCTCATGGTATTGAGACAAATTGCCACATTGTGAGTTACCTTCTGCAATGCTTCAG GAAGTTAGGCATGACATCTGAAGCAATTGCGTATTTCCTGAAATTTAAAGATTCAGGGCT TCATCTTGACAAGGTGATTTATAACATTGCTATGGATACTTATTGCAAGAATGGGAACAT GAACGAGGCAGTTAAGCTACTGAATGAAATGAAGTATGGGGGTTTGACACCTGACAAAAT TCACTACACATGCCTAATCAGTGGTTACTGTTTGAAGGGAGAAATGCAAAATGCACAGCA GGTATTTGAGGAAATGCTGAAGGCCAATATTGAGCCAGATATAGTTACATATAACATATT GGCTAGTGGGTTTTGCAAGAGCGGTCTTGTTATGGAGGTGTTTGATCTTCTAGACCGTAT GGCAGATCAAGGTTTGGAGCCTAATTCACTCACCTATGGTATAGCAATTGTTGGATTTTG TAGAGGAGGCAACCTTAGTGAAGCAGAGGTTCTATTTAATGTAGTAGAAGAAAAAGGAAT TGATCATATCGAAGTGATGTACAGTTCGATGGTTTGTGGCTATTTGCTTTCAGGCTGGAC TGATCATGCTTACATGCTTTTTGTAAGGGTTGCTCGACAAGGAAATCTTGTGGATCATTT TTCATGTTCTAAGTTGATAAATGACCTCTGTAGAGTTGGAAATGTCCAGGGGGCTTCAAA TGTTTGTAAGATTATGTTAGAACATGATGTTGTACCTGATGTGATTTCATATAGCAAACT CATATCAATCTATTGTCAGAATGGAGATATGGACAAAGCTCACTTATGGTTCCACGATAT GGTTCAGCGAGGACTTTCTGTTGATGTTATTGTATACACTATACTGATGAATGGTTACTG CAAGGCTGGTCGTCTGCAAGAAGCTTGTCAATTGTTTGTTCAAATGACAAACTTGGGCAT AAAGCCTGATGTGATTGCATATACAGTTCTACTGGATGGTCACTTAAAGGAGACCCTTCA GCAAGGTTGGGAGGGGATTGCTAAAGAGAGAAGGAGCTTTCTTCTTAGAGCGAATCATAA CAAGTTATTAAGCTCCATGAAAGACATGCAAATTGAACCTGATGTACCCTGTTACACGGT GTTGATTGATGGAAAGTGCAAAGCTGAATATCTAGTGGAAGCCCGGGAACTATTTGATGA GATGTTGCAGAAAGGACTTACTCCTGATGCTTATGCTTACACAGCTCTTATAAATGGATA TTGTAGCCAAGGGGAAATATCAAAGGCTGAAGATCTTTTGCAAGAAATGATTGACAAGGG AATAGAACCAGATGAATTGACCTTTTCAGTATTAAATCAGAGTTCCTTGAGGTCTAGGAA GATTCAGTTCTGTGCATGATTCCCTCTGTGGTACCATGTTTAGTAAATTCTTTCTACTGA GGACACCTATGTCAACAGCAAGGAGGTCAACATTGCTGATGAAGAACTTTCTGTAAAAAT TCGCAAAGAAAATGAGGCTCCTGTTGTTGAGAGAAAAGTCAAGAACATTTCAGATACCAA CATTAAGAGGTTGTGCATCCTATATCTCAGTCTGCTTTTCAAGCAGACCTCCTTGCAAAT CTCTTTGAGTCCTCATGCAATAGATGGCCTTGTTAAAGGATTGGAGGCCAATCAACGTCT AGTAGGTGACTTGACCCTAGCAACCCTTGAGGACAGTTGAACTCAGTTCAGGCTCTGATT TTACCTCCTAGACATTCAAAATAGGAACTCTCTTCAATTCCAATACTGTTCCTCAAGAAC ACAGGTCCAAATTCCACTTAAGGTTGTGACTCTCTGTGCAAGTAGAGATGTGATTTGTCA AATTTGGAACGGCACTAGTTAATGTCAAACTTCGATTCCCTGTTGTATTGAATTAATTCA TGGAACCTACAAATCTTCCACCTGAAGATTTTTTGCCTGCCTGGAATTCTGGAAAGCATT AGCTGCTCAGTCTCTGAAAGTTTAAGATGTGGAGTTCACCAAAGAGTCTTTAATTAATCG ATTATCCTTAGGGATAATTGGTTCTAATTCCGTCTACATTGGAAGCCATAGTTCCTTCAG AAGTACCTGTCACAATGGCAGCACAATGAAAAGAGGAAAACAAAGCATCCTGCTGGCAAA ACGACTTGTGGCTGAAGAACAATGATGAAGCAAGGGGTGACGCAGAAGTATTTATTTTAC TTTTGGCCGGGTTATAACTTATAAGTCCCTTGATCACTGCAGGTTATAAGCTCTGGGAAT CCTCATTGCCCTAGGTCTAGTGTTGAATCTATGTAGTTTTTTATGTAGTTTTTTCAACCA AAATCGATCTTGAAGTTTGCTGTTTATGTGTAATTACGATTTGTATCAACAAGATTAGAA TGTTTAGCTATATGCCTTGGATTGATTAACTAGGCTCGTTTTTTTTCTCATTCAAGTGTT CAATGAAATGTATGGTTCTCTAGCTTCTCTTTTGTTTCAAAATCCTTAGTTTTGGGGGCT TGCGTGTAGATGGCAGCTGTATCTTTCATGTATATAAAGCTATGGTTGTAGAAAATTATA GTGCGTATTATAAATTATTGTAGGATATATTATATTTGATGGTTAAG