Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0657100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:26306075:26310408:1 gene:Os11g0657100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptide chain release factor 1 family protein. (Os11t0657100-01)
Sequence

ATGGAGGCCTTCCTCGCCGGCTTCCGGGCGCCGCGGCCGCGGGTCCCGGCCGTCTCCGCC
GCCGCCCGGAGCCTCCCTCCCAACACCTCCTTCTTCTCCGGCGGAAGGCGGCGCAGGAGG
CTTCTTTCCTCATCGGTGGTCTGCATGGCGGAGCCCTATCTCATAGCAAAGTTGGATTCT
GCAGAGAAGGCTTGGAAGGAAATGTCGGTTAGATTGGCTGATCCTGATATAGTTTCGGAT
CCCAGCGAGTACCAAAAACTTGCACAATCAGTTGCTGAACTAGATCAGGTTGTGAGTACG
TACAGGCAGTTTAAGGACTGTGAGAAGCAAATTGAAGAAACAAAAGTTTTGCAAAAAGAG
AATGAAGATGACCCAGATATGGCAGAGATGATTGATTCAGAGATGGAGTCTCTATCTAAC
CAGCTTGAAGAGCTTGAGGAAAAACTGAAGTTACTACTGCTTCCCAATGATCCTCTTGAT
GCACGCAACATCTTACTTGAAGTAAGAGCAGGTGCTGGTGGTGATGAAGCTGGAATTTGG
GCTGGTGACCTTGTGCGTATGTATCAAAAATACTGTGAGCGCAACTCCTGGAAGTTCAAA
CCAGTTTCCAGCTCAGAAGCAGAAAAGGGTGGGTTCAAGACATATGTGATGGAGGTGAAG
GGCAAACAAGTCTACAGTAAACTGAAGTTTGAGTCAGGTGTACACCGTGTTCAGCGCGTT
CCTCAGACAGAGACTATGGGCCGTGTTCACACATCAACAGCAACTGTAGCTATTATGCCA
GAGGCTGATGAAGTTGATGTGGTTATCGATCCGAAAGATATTGAACTCAAAACTGCAAGA
TCTGGTGGAGCTGGAGGGCAGAATGTTAACAAGGTGGAAACTGCTGTTGATCTTATTCAC
AAACCTACGGGAATTCGGATATTCTGTACAGAAGAAAGGTCACAACTCCAAAATAGAGAA
CGCGCATTCCAATTGTTGAGAGCAAAGCTTTACGAGATAAAATTACGGGAGCAGCAGGAA
TCTATAAGAAACCAGAGGAAACTGCAGGTTGGAACTGGTGCTCGTTCTGAGAAGATAAGG
ACGTACAATTATAAGGACAACAGAGTGACAGATCACCGGTTGAAGATGAACTTTGAACTC
ACTGGTTTCCTCATGGGAGATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAG
AAGGAACTCCTGGAGGAGATGGCCACATCTGTGGGCGCAGCGAAGGTATGA

Peptide Sequence

PEP ID

Os11t0657100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:26306075:26310408:1 gene:Os11g0657100 transcript:Os11t0657100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptide chain release factor 1 family protein. (Os11t0657100-01)
Sequence

MEAFLAGFRAPRPRVPAVSAAARSLPPNTSFFSGGRRRRRLLSSSVVCMAEPYLIAKLDS
AEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKDCEKQIEETKVLQKE
NEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDEAGIW
AGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRV
PQTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIH
KPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESIRNQRKLQVGTGARSEKIR
TYNYKDNRVTDHRLKMNFELTGFLMGDIESAVQSCSSMEQKELLEEMATSVGAAKV

Transcript Sequence

Transcript ID

Os11t0657100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:26306075:26310408:1 gene:Os11g0657100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptide chain release factor 1 family protein. (Os11t0657100-01)
Sequence

AGCTGCTACTGCTCCTCTTCTCATCGCCACGCTACCTCTCAATGGAGGCCTTCCTCGCCG
GCTTCCGGGCGCCGCGGCCGCGGGTCCCGGCCGTCTCCGCCGCCGCCCGGAGCCTCCCTC
CCAACACCTCCTTCTTCTCCGGCGGAAGGCGGCGCAGGAGGCTTCTTTCCTCATCGGTGG
TCTGCATGGCGGAGCCCTATCTCATAGCAAAGTTGGATTCTGCAGAGAAGGCTTGGAAGG
AAATGTCGGTTAGATTGGCTGATCCTGATATAGTTTCGGATCCCAGCGAGTACCAAAAAC
TTGCACAATCAGTTGCTGAACTAGATCAGGTTGTGAGTACGTACAGGCAGTTTAAGGACT
GTGAGAAGCAAATTGAAGAAACAAAAGTTTTGCAAAAAGAGAATGAAGATGACCCAGATA
TGGCAGAGATGATTGATTCAGAGATGGAGTCTCTATCTAACCAGCTTGAAGAGCTTGAGG
AAAAACTGAAGTTACTACTGCTTCCCAATGATCCTCTTGATGCACGCAACATCTTACTTG
AAGTAAGAGCAGGTGCTGGTGGTGATGAAGCTGGAATTTGGGCTGGTGACCTTGTGCGTA
TGTATCAAAAATACTGTGAGCGCAACTCCTGGAAGTTCAAACCAGTTTCCAGCTCAGAAG
CAGAAAAGGGTGGGTTCAAGACATATGTGATGGAGGTGAAGGGCAAACAAGTCTACAGTA
AACTGAAGTTTGAGTCAGGTGTACACCGTGTTCAGCGCGTTCCTCAGACAGAGACTATGG
GCCGTGTTCACACATCAACAGCAACTGTAGCTATTATGCCAGAGGCTGATGAAGTTGATG
TGGTTATCGATCCGAAAGATATTGAACTCAAAACTGCAAGATCTGGTGGAGCTGGAGGGC
AGAATGTTAACAAGGTGGAAACTGCTGTTGATCTTATTCACAAACCTACGGGAATTCGGA
TATTCTGTACAGAAGAAAGGTCACAACTCCAAAATAGAGAACGCGCATTCCAATTGTTGA
GAGCAAAGCTTTACGAGATAAAATTACGGGAGCAGCAGGAATCTATAAGAAACCAGAGGA
AACTGCAGGTTGGAACTGGTGCTCGTTCTGAGAAGATAAGGACGTACAATTATAAGGACA
ACAGAGTGACAGATCACCGGTTGAAGATGAACTTTGAACTCACTGGTTTCCTCATGGGAG
ATATCGAGTCGGCTGTGCAGTCCTGTTCTTCAATGGAGCAGAAGGAACTCCTGGAGGAGA
TGGCCACATCTGTGGGCGCAGCGAAGGTATGATCAGCGCGATCGATCTGTCTGCAGTCCT
CCTTCCACCTGAGTACCAGACCATCAGATAGAAATCATCCAATGGACATTGTGTTGAAAC
GGGTGGTGATCAATGGACAAATGTACATGAAGAAATCCGAAGATACATATACATATGCTT
CCGTTGCTCATGAGCATGACTAATGTCAGAAAACACACTGATGCATTTTCAGTTCCTCTT
ACAGTTACAAATTTTGAGTAGTTGGATATATGCAATGTGTACATCTCAACAGTTGCATAG
CTACAATATGCATTATGCACAATTCAACCTGTTAATAGATGGGAATG