Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0655800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:26263729:26267141:1 gene:Os11g0655800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os11t0655800-01)
Sequence

ATGCTGCGAGAGAGGTCGTCGCGGAGGCGGATGGCGAGCTCGAGCACCGCCGCGGCGGCG
CTGGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCCGCGGGA
CGAGGAGGAGAACTCAGGATGAAGCATTCTGATGGTGGCTATTCTTATAACCGCACTCTC
GCCCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCACTTTTC
GCGTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAGATAATT
GTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATA
CTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTC
TGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTT
TATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCA
AGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGGGCTTTA
GCATCGTTCTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAACTCATG
ACTTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGCTGCGTACTTCAGTGACCAAGTC
CCGAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACCATATTTT
TGCTACCTTGGCGAATGGACATATCACCACTTCTCGAGAGAGGTTTGGCTTCATGAGACC
ATAGTAGGAAATGTAGTTACTAGGAATGAGACCATCTGTGATGGATCAGGCGAGGACCCA
ACATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTACGGTGTC
TCACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAACATGGCA
TATGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAAGAGTGG
CACGCCGTGGAATCTATTTAA

Peptide Sequence

PEP ID

Os11t0655800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:26263729:26267141:1 gene:Os11g0655800 transcript:Os11t0655800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os11t0655800-01)
Sequence

MLRERSSRRRMASSSTAAAALVVAALLLSSSPSPAAAAAGRGGELRMKHSDGGYSYNRTL
AHIFVQYASAVYTSDLTSLFAWTCPRCQSDTKGFEMIEIIVDVENCLQAFVGVAPDPQSI
LIAFRGTQEHSVSNWIEDLFWKQLDVGYPGMPDAMVHHGFYTAYYNTTVRHEILESVRWA
RKTYGRLPINVVGHSMGGALASFCALDLSVKYGSQEVQLMTFGQPRVGNPSFAAYFSDQV
PRTIRVTHQNDIVPHLPPYFCYLGEWTYHHFSREVWLHETIVGNVVTRNETICDGSGEDP
TCSRSVYGRSVADHLEYYGVSLHADSRGTCQFVIGSTNMAYGTILEVDRTIIMTRYPQEW
HAVESI

Transcript Sequence

Transcript ID

Os11t0655800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:26263729:26267141:1 gene:Os11g0655800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, class 3 family protein. (Os11t0655800-01)
Sequence

GAGTTCTTTCTACCCGTCTCCATTGGAGGTGGTGGGTGCGAGTTGGGAAAGGCGAGAGGG
AGGGAGATGCTGCGAGAGAGGTCGTCGCGGAGGCGGATGGCGAGCTCGAGCACCGCCGCG
GCGGCGCTGGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCC
GCGGGACGAGGAGGAGAACTCAGGATGAAGCATTCTGATGGTGGCTATTCTTATAACCGC
ACTCTCGCCCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCA
CTTTTCGCGTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAG
ATAATTGTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAA
TCCATACTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGAT
CTCTTCTGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCAT
GGGTTTTATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGG
TGGGCAAGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGG
GCTTTAGCATCGTTCTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAA
CTCATGACTTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGCTGCGTACTTCAGTGAC
CAAGTCCCGAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACCA
TATTTTTGCTACCTTGGCGAATGGACATATCACCACTTCTCGAGAGAGGTTTGGCTTCAT
GAGACCATAGTAGGAAATGTAGTTACTAGGAATGAGACCATCTGTGATGGATCAGGCGAG
GACCCAACATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTAC
GGTGTCTCACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAAC
ATGGCATATGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAA
GAGTGGCACGCCGTGGAATCTATTTAACCCTTTGCCCGAGGGTAAATTGTATATAATTAT
TTTCCTTTTGTGCATATAGCTCATGTAATGTAGGTGTACTGGGTTCTCCAGGAGCTCTCC
TGAGGATAAGGAGAGGTTTCATTTTTAATATGTGCCCCCCTTTACTCAAGTGAGAATTGT
ACATGGAAGCTCCATATGAACATTGTAGACACGCCTTTATTGATGTACATAGCAATATCA
ATGGAATAAATAATAGAAGGATTTGATGGTATT