Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0654800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:26195130:26198011:-1 gene:Os11g0654800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0654800-01)
Sequence	ATGGCGCACCTGACGAACGGCGCGGTGGACTCGCTGCTGGGTGTGTTGTCGAAGGTGGTG AAGGACGAGGCGAAGCTGCTGGGAGGCGTGGAGGGCGACATCCAGTTCATCAGGGACGAG ATGGACAGCATGAACGGCTTCCTCCTCCACCTCACCAAGTCCAAGACGCCGCACAACGAC CAGCTCCGCGCCTGGATGAAGCAGGTCCGCGACGTCACCTACGTCGCCGACGACTGCATC AGCCTCTACATGCGCGACCTCATCCCGCCGGAGGCCGGCCTCTGGCCGTGGCTCCGCCAC ATCCCCAAGCGCCTCCGCACGATTCCGGCCCGCCACCGCCTCGCCAACAAGATCCACAAG CTCAAGGACCGCGTGCGCGAGGTCGGCGAGAGGCGCCTGCGCTACGACGTCAAGCTCCCA GAACTACACAATTCGGAGGAGTCGTCGTCGTTGCTGGTCGCCCGAGACAGCAAGGTCGAG GAGAAGAGGGACGAATTCCTACGTGCCATCGACCATGTCCACCATGCTCCTCCTTCACCT TCAGCGATCGAGATGCTCCCTCTTGATCTTGGAAAGGATGCTCTCGAACACCTACATGAT ATCAAGAAATGCCTCGATGGGGGTCATGTCGCCAGCATGAAGATGCTGCTTCGTGCTCTG TATGCCTATCCCTACGGTACCATAGAAGAATTGAAAGACTTATCCAACAGTCTTAAGATT AAAGGAGCAGATGTGGCCAAATTGGTGATGATTTTCTGCTACAGCAAGCTGCCCACGCAT TGCAAGAGCTGCCTGCAGTACCTGGCTGCCATGGGAGAGGAAGATAAAATCAATAGGGCG TGCTTGGTCAGGCGATGGGTCGCCGAGGGCCTCCTGCCCCTCAGGGTCGTCGAACCGCCT CTTACCACCACCATGGAAGAAGCCGGCGAACTCTGCTTCAAGGAGCTCGTCTTTCGAGGC TTTCTTCTTCCTGCTCCTTCTCCTACAGATCATCCTCAAGATGACGATGTAGCTGTTGGT ACATGCAGCCTAAATCTCAAGAGCTGTGTCGTTGATAATGCAGTCAAGAAATTCATCCCC GACATCTCCAAGAGCGATAATTTTGTGGTTGACCTGCCTACCCACCTTCAGCTTCAGCTC AAAATCAGACATATGGTTCGATCGACCTTTCCTGCAACTGCGTCAGCAGAAGAGAAACAG CAACCACAGCAGCAGCTGAATCCCATGGATGGGATGGTGAAGCTCCTCAAGGAGTTACCT GAAGAGTATCGGCTGAACGTGATAGATCTAGGGGGCTGCCAGAGATTGGAGAAGAGCCAC CTCAAGAGTATCTGCAAGGTGACCTCCCTCAAGTATCTGAGCCTCCGGAACACCGACGTT TCCAGTCTGCCCAAGAAGATGGAGGACTTGTGGCAGCTGGAGACGCTCGATATCCGGGAC ACCAAAAAGATGCCGGCCACCGCCATGAGGCGCATCTACCTCCTCAACCTGAAGCATCTC CTTGCCGGCAACAACATCAATACCGACGGCGGTGGCGAAGGCAAGAAAAATGAGTCAGGC TCCACCGTGCTGGTACCTCACAGGATCGGGAAGAAGACGGAGACATTGCGCCATGTCCGG ATTAAGGACGGCCAAGCCGACCTTGCACGGATTGGGTCTCTAGAGCAGCTGAGGAAGTTG GGAGTCGTCCTCGACGGCAGCCAAGGTAACATCACTCATTTGCTTGAAGCAATCTCCAAG CGGAGAGATACCCTGCGCTCACTGTCAGTCTGGATCACGGAGCCACCGCCACCGCCGGCT GCGGAGCACATGGCCGGCGACGACGTGTTCGTGACTCTTGACCATTCACAAGAAGAAATC CTAGCTCCCAGTAAACTTGAGAGCTTAGACCTCAACCTCAAGTGCTTCTTCAAGGGAGGA AATGGCGGCGACAAGAGAGGCTACAAGCTCCCTACATGGATCAACGAAAAGTTCCAAGCG CTTTCCAAGATCACTCTACGTTACACCCTACTGCGCGACGACGGTCTGCGGATCCTCGGC AAGCTGAAGAGCTTGCGCTGCCTCAGGCTGCTTCGCAAATCATACATCGAAAGCGAGGTC ACCCTCGAGGAGGGGGAGTTCGGGGAGCTGAGGCTCCTCCTGCTTGATCATGTCTCTGAT AAGACGGCCTTGTTGATCAAAGCCCGTGCAGCTCCCAAGCTGGAGAAGATTGTGTGGAAC TTGAACAAGACGAAGACGTTGGTGACGATCTCCCCCGACGACATTGCTGGGATCAATAAC ACGGCCATACTTCGCTTCAAGGCCGCCGATGCAGCAGCTCCTACGAAGGAGAAGGTTGAC TGGAACTGCAACAGCACGAGGAAGATCACTCCGGACATCATCCGGGGTTCAATCGAATTC AATCAAGTCCAAGAGGGAGCTCAAGAATTCCTCAAGTAA

Peptide Sequence

PEP ID	Os11t0654800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:26195130:26198011:-1 gene:Os11g0654800 transcript:Os11t0654800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0654800-01)
Sequence	MAHLTNGAVDSLLGVLSKVVKDEAKLLGGVEGDIQFIRDEMDSMNGFLLHLTKSKTPHND QLRAWMKQVRDVTYVADDCISLYMRDLIPPEAGLWPWLRHIPKRLRTIPARHRLANKIHK LKDRVREVGERRLRYDVKLPELHNSEESSSLLVARDSKVEEKRDEFLRAIDHVHHAPPSP SAIEMLPLDLGKDALEHLHDIKKCLDGGHVASMKMLLRALYAYPYGTIEELKDLSNSLKI KGADVAKLVMIFCYSKLPTHCKSCLQYLAAMGEEDKINRACLVRRWVAEGLLPLRVVEPP LTTTMEEAGELCFKELVFRGFLLPAPSPTDHPQDDDVAVGTCSLNLKSCVVDNAVKKFIP DISKSDNFVVDLPTHLQLQLKIRHMVRSTFPATASAEEKQQPQQQLNPMDGMVKLLKELP EEYRLNVIDLGGCQRLEKSHLKSICKVTSLKYLSLRNTDVSSLPKKMEDLWQLETLDIRD TKKMPATAMRRIYLLNLKHLLAGNNINTDGGGEGKKNESGSTVLVPHRIGKKTETLRHVR IKDGQADLARIGSLEQLRKLGVVLDGSQGNITHLLEAISKRRDTLRSLSVWITEPPPPPA AEHMAGDDVFVTLDHSQEEILAPSKLESLDLNLKCFFKGGNGGDKRGYKLPTWINEKFQA LSKITLRYTLLRDDGLRILGKLKSLRCLRLLRKSYIESEVTLEEGEFGELRLLLLDHVSD KTALLIKARAAPKLEKIVWNLNKTKTLVTISPDDIAGINNTAILRFKAADAAAPTKEKVD WNCNSTRKITPDIIRGSIEFNQVQEGAQEFLK

Transcript Sequence

Transcript ID	Os11t0654800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:26195130:26198011:-1 gene:Os11g0654800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0654800-01)
Sequence	ATAGAAGAAAGATCAAGATCAAGATCAAGATCAGCTTGAATTGTTTTTAGCTTTTCCTGC AGCTATCTCCTACCGTCGTTCTCCTCAAAAAAAAGATCAAGATAGAGAGATATATCATAA GATAATTGCATCCTACGACAATGGCGCACCTGACGAACGGCGCGGTGGACTCGCTGCTGG GTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGTGGAGGGCGACA TCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTCCTCCACCTCACCAAGT CCAAGACGCCGCACAACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCGCGACGTCACCT ACGTCGCCGACGACTGCATCAGCCTCTACATGCGCGACCTCATCCCGCCGGAGGCCGGCC TCTGGCCGTGGCTCCGCCACATCCCCAAGCGCCTCCGCACGATTCCGGCCCGCCACCGCC TCGCCAACAAGATCCACAAGCTCAAGGACCGCGTGCGCGAGGTCGGCGAGAGGCGCCTGC GCTACGACGTCAAGCTCCCAGAACTACACAATTCGGAGGAGTCGTCGTCGTTGCTGGTCG CCCGAGACAGCAAGGTCGAGGAGAAGAGGGACGAATTCCTACGTGCCATCGACCATGTCC ACCATGCTCCTCCTTCACCTTCAGCGATCGAGATGCTCCCTCTTGATCTTGGAAAGGATG CTCTCGAACACCTACATGATATCAAGAAATGCCTCGATGGGGGTCATGTCGCCAGCATGA AGATGCTGCTTCGTGCTCTGTATGCCTATCCCTACGGTACCATAGAAGAATTGAAAGACT TATCCAACAGTCTTAAGATTAAAGGAGCAGATGTGGCCAAATTGGTGATGATTTTCTGCT ACAGCAAGCTGCCCACGCATTGCAAGAGCTGCCTGCAGTACCTGGCTGCCATGGGAGAGG AAGATAAAATCAATAGGGCGTGCTTGGTCAGGCGATGGGTCGCCGAGGGCCTCCTGCCCC TCAGGGTCGTCGAACCGCCTCTTACCACCACCATGGAAGAAGCCGGCGAACTCTGCTTCA AGGAGCTCGTCTTTCGAGGCTTTCTTCTTCCTGCTCCTTCTCCTACAGATCATCCTCAAG ATGACGATGTAGCTGTTGGTACATGCAGCCTAAATCTCAAGAGCTGTGTCGTTGATAATG CAGTCAAGAAATTCATCCCCGACATCTCCAAGAGCGATAATTTTGTGGTTGACCTGCCTA CCCACCTTCAGCTTCAGCTCAAAATCAGACATATGGTTCGATCGACCTTTCCTGCAACTG CGTCAGCAGAAGAGAAACAGCAACCACAGCAGCAGCTGAATCCCATGGATGGGATGGTGA AGCTCCTCAAGGAGTTACCTGAAGAGTATCGGCTGAACGTGATAGATCTAGGGGGCTGCC AGAGATTGGAGAAGAGCCACCTCAAGAGTATCTGCAAGGTGACCTCCCTCAAGTATCTGA GCCTCCGGAACACCGACGTTTCCAGTCTGCCCAAGAAGATGGAGGACTTGTGGCAGCTGG AGACGCTCGATATCCGGGACACCAAAAAGATGCCGGCCACCGCCATGAGGCGCATCTACC TCCTCAACCTGAAGCATCTCCTTGCCGGCAACAACATCAATACCGACGGCGGTGGCGAAG GCAAGAAAAATGAGTCAGGCTCCACCGTGCTGGTACCTCACAGGATCGGGAAGAAGACGG AGACATTGCGCCATGTCCGGATTAAGGACGGCCAAGCCGACCTTGCACGGATTGGGTCTC TAGAGCAGCTGAGGAAGTTGGGAGTCGTCCTCGACGGCAGCCAAGGTAACATCACTCATT TGCTTGAAGCAATCTCCAAGCGGAGAGATACCCTGCGCTCACTGTCAGTCTGGATCACGG AGCCACCGCCACCGCCGGCTGCGGAGCACATGGCCGGCGACGACGTGTTCGTGACTCTTG ACCATTCACAAGAAGAAATCCTAGCTCCCAGTAAACTTGAGAGCTTAGACCTCAACCTCA AGTGCTTCTTCAAGGGAGGAAATGGCGGCGACAAGAGAGGCTACAAGCTCCCTACATGGA TCAACGAAAAGTTCCAAGCGCTTTCCAAGATCACTCTACGTTACACCCTACTGCGCGACG ACGGTCTGCGGATCCTCGGCAAGCTGAAGAGCTTGCGCTGCCTCAGGCTGCTTCGCAAAT CATACATCGAAAGCGAGGTCACCCTCGAGGAGGGGGAGTTCGGGGAGCTGAGGCTCCTCC TGCTTGATCATGTCTCTGATAAGACGGCCTTGTTGATCAAAGCCCGTGCAGCTCCCAAGC TGGAGAAGATTGTGTGGAACTTGAACAAGACGAAGACGTTGGTGACGATCTCCCCCGACG ACATTGCTGGGATCAATAACACGGCCATACTTCGCTTCAAGGCCGCCGATGCAGCAGCTC CTACGAAGGAGAAGGTTGACTGGAACTGCAACAGCACGAGGAAGATCACTCCGGACATCA TCCGGGGTTCAATCGAATTCAATCAAGTCCAAGAGGGAGCTCAAGAATTCCTCAAGTAAG TCCGAGGGAGCTCAAGATCTCATGAAGTGCGTGTTCCCCTTACCACGCGATCGATCTATA TACGTTGCTTCATCACAGTAGAAGGAGATCAGAATGTGGAAAGAATAATTAAATGAAGAC CTACTTACATATTTCTATCTGGCCGGTTCTGGTAAGAATTAATAATCGCAAGTTCACTGC CGCGTGTATATATATTCATTATATTGCAAGGTTGT