Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0652100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:26027842:26032480:-1 gene:Os11g0652100 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0652100-01)
Sequence	ATGGCTGAGCTCACGGCGGGCGCCGTGAGCTCGCTGTTGGGCCTCATCCGCAACGCGGAG CTGATGATGTCGGGCCGCGCCAAGGAGGACATGCAGTTCATCAAGGATGAGATGGACAGC ATCAACGGCACCCTCATGTACCTCACCGAGAATAAGGCCTCCCACAACGACCAGGTCCGG GTGTGGATGAGGCAGGTCCGTGATATCGCCTACGTCGCCGACGACTGCATCACGCTCTAC CGCCGCGACCTCACCCCGCCGGAGCCGGGCTTCTGGCCCTGGCTCCGCCACGTCCCGACG TGGCTGAGCACGGTGCCCACCCGCCATCGCCTCGCCAAGAAGATCCACGAGCTCAAGGAC CGTGTCCGCGACGTCGGCGAGCGGCGGCAGAGGTATGGAGTGGTGGGGGAGATCCCGACG AAGAATGCGGCGTCTTCTTCCGGCCACGGGTCTCAGACGGCGCCGTCTTCTGATGCTGCG GCGGCCACAGCTGCAGCTGATGCTCGAGCAGATGAAGAGGACGACGACCAGAATCATGCA GCAACGGCGACCGTCGTCGATGGTCGTCCTGACCGCCGAAGAGCTCTAGAGCCTCGCACT CTAGAGGACTACTGCTGCGAGAACCTGCACAAGTGGCTCAAGGAATTCAACACAAAGAGG GGTTCAATGGTGCCATTTATCGCTGTTGAGGCACCGCGTCCAGAGGATGCCGCCGCCGTT TCTTCAATAGTCTCGTATGTGGCGGCGGAGGCAGCTGGTTTCAATCCCGCAGTCTGGGTC AATCTCCCGCTGCTGCACGCGGAATTTGATCTGCCACTTGAACCCTGGGAAATTCTCTGC TACATCCTGGGGGAGCTCAAGCCTCGATCCCAGCCCGTACAAGCACAAGGCAGCAGAGAT AAACGCAAGCAGAAGCAGGAGGAGGGAGGCAAAGATGACAAGGCCATGGGCAGTGACGAC GACGACGACAACCTTCAATCGCAAGCCTCCGATGAAAAATGGCAAGTGTTTGATGAAATG TGGGAAGAGATAGAAAAAAGGAATTTCGACGACCGCATTGAACAACTCAAGACGAAGATC GACAGCATCAAGGACAAGAAAACGACCAATGAAATCGAGAAAACGGTGAGAAGCCAAGAA AAGGTTAATCTCAACGCTCTTGTCTACAATAAACCTTTGGGCATACTTTTCCTGGCATTG CTGCCTCCCATGCCAAATGATGTAAAGTCGGTGAGGCGTGCCCTGCGTACCTTAGCATCG GGCGAGGCGAATATTATCAGAAAAATTGCAGAGGCGCTTAAAATTCATATGGAAGTATCA GAGGTGAACAAGATTCATCTCAGTAAGAAGCAATATGTAAACATCCTGAGGGAAGTGTTC CCGACAGTCAGCAGCACGCCACTGAAGCAGGATAAATCTACCACCAAGTCCACTGCACTA GGACCAAGTGCTGCTGCTACTATGTTAGGCAAGGATCAAATCAAAGAAATTGTCCACAAG GCTATACTAGACAAGCAATTGGAGAAGCACTTGGAAGTGGCTGATGCTATTGAAGAAACT AAGAACAAGATAGGGGATATCAAGGAGAAGATTAAAGTCCAGCTGGTGATCCAAGGGATT GTGGACAAGATCAAAGACCATTTGGAGAAGGATAAAAGGACCCTGATTATCCTCCAAGAT GATAAAGGCTTCTTGTCTTCGTGCGAGGAGACCACCATGAATGCTTTAAGCCTACTGGGT TACACTTGCGCTGATGCAATGGTCGTGGTTATCACAAAGGAAAGCCAAGTGGCCAATAAA TTTTGCTATCCACCGCGAGAGCCTATTACCTATTCTATTGCTGGTCTCTATCATGATACC GTGCTCCAGCTTACAAGTCAGCAGGCGAAACAAAACAATAACTACAATTCCCAGCTTTTC CGTGACATCTTGGACAAGTGTGATCCAGATGAGTTCTGCATGAAGATGTTTGCTCATGCT TTGTATGCTGAACCCAATAGGAGCAACAATGATCTGCGCGAGTTGTATAAAACCCTGGTT CCACAAAAATCGCTAGCCAGTAATGCTTCCAAGGCTAGTCCTGAGCCTGACAAAAGCAAT GACAGCACCCAACTGGTCTCAGAAGAATCATCGTTGTGCAACAATGCTAAGAAGATATTC GAGTTCTCCTACAACGACATGCCTACAGAATACTTGTCCTGCTTGCTGTACCTAGCTATC TTCCCTCAAGGCCAAAGCATCAGGAGATCAACCTTACAAGCACGGTGGGTTGTAGAAGGG CTGATAACCGGGAAGGACGATTGGCCTAGTGCAGACTGTGCGGTGCGTAATGCTGAGAGA TGTTTTGACGTGCTCATCGATCGGTGGCTTGTTTATCCAGGGGATGTTACCGCTGCAGGA AAGGTCAAGAGCTGCATGGTAGACAATCTTGTTCATGAGTTCATCACCAAGGCTGCCAAG GAGAAACAATTTGTGAAGGAAAGCCAATTGCATCACTTGGCTCACCACTTTTCTATTTTT TGCAATCTCCGACTCCGCCGCTCTGACAACATCGAAAAGTTCATGCAAAATCTCAAGTAT TTTTCACCTTATTTGCAACTGCTCAAGGTGCTGGATCTAGAAGGCTGCCAATCATTTGAC AAGAACAACCACTACCTCGAAGACATCTGCAACAAAGTTTTACTGCTTAAGTATCTGAGC CTAAAGGACACAAATGTTGCCCACCTGCCCAATGCTATCAATAACCTTCATGAGCTGGAG GTATTAGATATCCGGCAAGCCAAGGTACCTGAGATTGACACAAACTCTATCATGCTTTTC AATCTGAAGCGACTACTGGCAGGTCAAGTTTATCCAAGCCCAAGATACAATAGCACCGGC ATGTATCTCAAACGACATGAAGAGACAATATCATCCAGTGTGCGGATTCCTCGCAAGATT GAGAAAATGGTTAAAATGGAAGTAATGTATAGTGTCAACGTTTCACGGGATGGTAATATG TTGACAGAGATTGGAAAGCTACGGCAACTAAGAAAGCTTGGTGTGGTTATCGACGACCAT GATGGTCACCTCAGGAAGTTGCTTCAGGTGATCAGTGACCTGAGTGGGTCCCTCCGGTCT TTATCGATCACTCTAATTGGAACAGGAAGTGAGCAGGCTCCTTCCAGCGAAGAGACATCT GCAGATTGCTTGAAACAACATCCCAAGCTTCTAGAGAGCTTAAGCATCAGTGGAGTGATA GACAAGGTGCAGCTTCTACCATTGTTGGCCATAGGTCAGGGCAACCGTAACCTTGCCAAG GTAACTATTAGTGGGACCATGCTGAAGCAAGAGGATCTGAAAAAAGACATCGCCAAGCTC CACAATCTATGCTGTTTTAGGCTCAGGCATCGATCATACGACGATGAGAAAATCACTTTT GAAGAGAATGAGTTCCTGGAACTCAAATACCTTATCATAGAGGGCACCAACATGATGAGC ATTATATTTAAACAAGGAGCAGCCCCTAAGATTGAGAAGATTATCCTGTCCTTCACGTCC ACAACTCATATTGCTGGAATTGTTGACCTTCCAAACCTGAAGGAGCTTGAGCTGAAAGGG AATAATAATGATCGGAAGCTTGTTGCATGTCTTGCCGGTGCTCCTCACCTTTCCAGGTTA ACACTCGATGGTACCTTGCTGGATCTCAATGAACTGAAAATACTGGCCGAGCTACCAAGC TTGCGCAGCCTCATTCTCCTGCAACAGTCTTGCGTCAGAAGTAGCCTCAACTTCAACAAT GGTGAGTTCAGCAAGCTCAACCTCCTTGTTGTTAATTGCTCGAACATCACCAGCATCAGC TTCACAGACGAAGGAGCAGCACCTAAGCTCGAGAAGATCACCTGGTCCTTCACTACCAAG ATGTTGTCCCTCTCTGGCATCTGCTACCTTCCGCAACTGAAGGAGCTCGAGCTCAACGGT AAAATTATCCCTGATCAGGTGATACAAGACATTAAGGAACATAAAAACAAACCTATTTTT AATCACCAGTAA

Peptide Sequence

PEP ID	Os11t0652100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:26027842:26032480:-1 gene:Os11g0652100 transcript:Os11t0652100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0652100-01)
Sequence	MAELTAGAVSSLLGLIRNAELMMSGRAKEDMQFIKDEMDSINGTLMYLTENKASHNDQVR VWMRQVRDIAYVADDCITLYRRDLTPPEPGFWPWLRHVPTWLSTVPTRHRLAKKIHELKD RVRDVGERRQRYGVVGEIPTKNAASSSGHGSQTAPSSDAAAATAAADARADEEDDDQNHA ATATVVDGRPDRRRALEPRTLEDYCCENLHKWLKEFNTKRGSMVPFIAVEAPRPEDAAAV SSIVSYVAAEAAGFNPAVWVNLPLLHAEFDLPLEPWEILCYILGELKPRSQPVQAQGSRD KRKQKQEEGGKDDKAMGSDDDDDNLQSQASDEKWQVFDEMWEEIEKRNFDDRIEQLKTKI DSIKDKKTTNEIEKTVRSQEKVNLNALVYNKPLGILFLALLPPMPNDVKSVRRALRTLAS GEANIIRKIAEALKIHMEVSEVNKIHLSKKQYVNILREVFPTVSSTPLKQDKSTTKSTAL GPSAAATMLGKDQIKEIVHKAILDKQLEKHLEVADAIEETKNKIGDIKEKIKVQLVIQGI VDKIKDHLEKDKRTLIILQDDKGFLSSCEETTMNALSLLGYTCADAMVVVITKESQVANK FCYPPREPITYSIAGLYHDTVLQLTSQQAKQNNNYNSQLFRDILDKCDPDEFCMKMFAHA LYAEPNRSNNDLRELYKTLVPQKSLASNASKASPEPDKSNDSTQLVSEESSLCNNAKKIF EFSYNDMPTEYLSCLLYLAIFPQGQSIRRSTLQARWVVEGLITGKDDWPSADCAVRNAER CFDVLIDRWLVYPGDVTAAGKVKSCMVDNLVHEFITKAAKEKQFVKESQLHHLAHHFSIF CNLRLRRSDNIEKFMQNLKYFSPYLQLLKVLDLEGCQSFDKNNHYLEDICNKVLLLKYLS LKDTNVAHLPNAINNLHELEVLDIRQAKVPEIDTNSIMLFNLKRLLAGQVYPSPRYNSTG MYLKRHEETISSSVRIPRKIEKMVKMEVMYSVNVSRDGNMLTEIGKLRQLRKLGVVIDDH DGHLRKLLQVISDLSGSLRSLSITLIGTGSEQAPSSEETSADCLKQHPKLLESLSISGVI DKVQLLPLLAIGQGNRNLAKVTISGTMLKQEDLKKDIAKLHNLCCFRLRHRSYDDEKITF EENEFLELKYLIIEGTNMMSIIFKQGAAPKIEKIILSFTSTTHIAGIVDLPNLKELELKG NNNDRKLVACLAGAPHLSRLTLDGTLLDLNELKILAELPSLRSLILLQQSCVRSSLNFNN GEFSKLNLLVVNCSNITSISFTDEGAAPKLEKITWSFTTKMLSLSGICYLPQLKELELNG KIIPDQVIQDIKEHKNKPIFNHQ

Transcript Sequence

Transcript ID	Os11t0652100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:26027842:26032480:-1 gene:Os11g0652100 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0652100-01)
Sequence	GCTTTATTTATTTAATAATAAAGGGATCGCTAAGCTTTATTGCTGGTGTGGTGCTCACCT GATATCCCAAGCAAGTTCGATATTCTCGACTTAAATAGGCTGGCCATTTTACTAAGCAAA GCTGAAGTAAGCCTAGCTAGCTAGCCAGAATACTGAAGGTGTGTGGTGTGTTGTGGCTGG ACGGCGGCGATGGCTGAGCTCACGGCGGGCGCCGTGAGCTCGCTGTTGGGCCTCATCCGC AACGCGGAGCTGATGATGTCGGGCCGCGCCAAGGAGGACATGCAGTTCATCAAGGATGAG ATGGACAGCATCAACGGCACCCTCATGTACCTCACCGAGAATAAGGCCTCCCACAACGAC CAGGTCCGGGTGTGGATGAGGCAGGTCCGTGATATCGCCTACGTCGCCGACGACTGCATC ACGCTCTACCGCCGCGACCTCACCCCGCCGGAGCCGGGCTTCTGGCCCTGGCTCCGCCAC GTCCCGACGTGGCTGAGCACGGTGCCCACCCGCCATCGCCTCGCCAAGAAGATCCACGAG CTCAAGGACCGTGTCCGCGACGTCGGCGAGCGGCGGCAGAGGTATGGAGTGGTGGGGGAG ATCCCGACGAAGAATGCGGCGTCTTCTTCCGGCCACGGGTCTCAGACGGCGCCGTCTTCT GATGCTGCGGCGGCCACAGCTGCAGCTGATGCTCGAGCAGATGAAGAGGACGACGACCAG AATCATGCAGCAACGGCGACCGTCGTCGATGGTCGTCCTGACCGCCGAAGAGCTCTAGAG CCTCGCACTCTAGAGGACTACTGCTGCGAGAACCTGCACAAGTGGCTCAAGGAATTCAAC ACAAAGAGGGGTTCAATGGTGCCATTTATCGCTGTTGAGGCACCGCGTCCAGAGGATGCC GCCGCCGTTTCTTCAATAGTCTCGTATGTGGCGGCGGAGGCAGCTGGTTTCAATCCCGCA GTCTGGGTCAATCTCCCGCTGCTGCACGCGGAATTTGATCTGCCACTTGAACCCTGGGAA ATTCTCTGCTACATCCTGGGGGAGCTCAAGCCTCGATCCCAGCCCGTACAAGCACAAGGC AGCAGAGATAAACGCAAGCAGAAGCAGGAGGAGGGAGGCAAAGATGACAAGGCCATGGGC AGTGACGACGACGACGACAACCTTCAATCGCAAGCCTCCGATGAAAAATGGCAAGTGTTT GATGAAATGTGGGAAGAGATAGAAAAAAGGAATTTCGACGACCGCATTGAACAACTCAAG ACGAAGATCGACAGCATCAAGGACAAGAAAACGACCAATGAAATCGAGAAAACGGTGAGA AGCCAAGAAAAGGTTAATCTCAACGCTCTTGTCTACAATAAACCTTTGGGCATACTTTTC CTGGCATTGCTGCCTCCCATGCCAAATGATGTAAAGTCGGTGAGGCGTGCCCTGCGTACC TTAGCATCGGGCGAGGCGAATATTATCAGAAAAATTGCAGAGGCGCTTAAAATTCATATG GAAGTATCAGAGGTGAACAAGATTCATCTCAGTAAGAAGCAATATGTAAACATCCTGAGG GAAGTGTTCCCGACAGTCAGCAGCACGCCACTGAAGCAGGATAAATCTACCACCAAGTCC ACTGCACTAGGACCAAGTGCTGCTGCTACTATGTTAGGCAAGGATCAAATCAAAGAAATT GTCCACAAGGCTATACTAGACAAGCAATTGGAGAAGCACTTGGAAGTGGCTGATGCTATT GAAGAAACTAAGAACAAGATAGGGGATATCAAGGAGAAGATTAAAGTCCAGCTGGTGATC CAAGGGATTGTGGACAAGATCAAAGACCATTTGGAGAAGGATAAAAGGACCCTGATTATC CTCCAAGATGATAAAGGCTTCTTGTCTTCGTGCGAGGAGACCACCATGAATGCTTTAAGC CTACTGGGTTACACTTGCGCTGATGCAATGGTCGTGGTTATCACAAAGGAAAGCCAAGTG GCCAATAAATTTTGCTATCCACCGCGAGAGCCTATTACCTATTCTATTGCTGGTCTCTAT CATGATACCGTGCTCCAGCTTACAAGTCAGCAGGCGAAACAAAACAATAACTACAATTCC CAGCTTTTCCGTGACATCTTGGACAAGTGTGATCCAGATGAGTTCTGCATGAAGATGTTT GCTCATGCTTTGTATGCTGAACCCAATAGGAGCAACAATGATCTGCGCGAGTTGTATAAA ACCCTGGTTCCACAAAAATCGCTAGCCAGTAATGCTTCCAAGGCTAGTCCTGAGCCTGAC AAAAGCAATGACAGCACCCAACTGGTCTCAGAAGAATCATCGTTGTGCAACAATGCTAAG AAGATATTCGAGTTCTCCTACAACGACATGCCTACAGAATACTTGTCCTGCTTGCTGTAC CTAGCTATCTTCCCTCAAGGCCAAAGCATCAGGAGATCAACCTTACAAGCACGGTGGGTT GTAGAAGGGCTGATAACCGGGAAGGACGATTGGCCTAGTGCAGACTGTGCGGTGCGTAAT GCTGAGAGATGTTTTGACGTGCTCATCGATCGGTGGCTTGTTTATCCAGGGGATGTTACC GCTGCAGGAAAGGTCAAGAGCTGCATGGTAGACAATCTTGTTCATGAGTTCATCACCAAG GCTGCCAAGGAGAAACAATTTGTGAAGGAAAGCCAATTGCATCACTTGGCTCACCACTTT TCTATTTTTTGCAATCTCCGACTCCGCCGCTCTGACAACATCGAAAAGTTCATGCAAAAT CTCAAGTATTTTTCACCTTATTTGCAACTGCTCAAGGTGCTGGATCTAGAAGGCTGCCAA TCATTTGACAAGAACAACCACTACCTCGAAGACATCTGCAACAAAGTTTTACTGCTTAAG TATCTGAGCCTAAAGGACACAAATGTTGCCCACCTGCCCAATGCTATCAATAACCTTCAT GAGCTGGAGGTATTAGATATCCGGCAAGCCAAGGTACCTGAGATTGACACAAACTCTATC ATGCTTTTCAATCTGAAGCGACTACTGGCAGGTCAAGTTTATCCAAGCCCAAGATACAAT AGCACCGGCATGTATCTCAAACGACATGAAGAGACAATATCATCCAGTGTGCGGATTCCT CGCAAGATTGAGAAAATGGTTAAAATGGAAGTAATGTATAGTGTCAACGTTTCACGGGAT GGTAATATGTTGACAGAGATTGGAAAGCTACGGCAACTAAGAAAGCTTGGTGTGGTTATC GACGACCATGATGGTCACCTCAGGAAGTTGCTTCAGGTGATCAGTGACCTGAGTGGGTCC CTCCGGTCTTTATCGATCACTCTAATTGGAACAGGAAGTGAGCAGGCTCCTTCCAGCGAA GAGACATCTGCAGATTGCTTGAAACAACATCCCAAGCTTCTAGAGAGCTTAAGCATCAGT GGAGTGATAGACAAGGTGCAGCTTCTACCATTGTTGGCCATAGGTCAGGGCAACCGTAAC CTTGCCAAGGTAACTATTAGTGGGACCATGCTGAAGCAAGAGGATCTGAAAAAAGACATC GCCAAGCTCCACAATCTATGCTGTTTTAGGCTCAGGCATCGATCATACGACGATGAGAAA ATCACTTTTGAAGAGAATGAGTTCCTGGAACTCAAATACCTTATCATAGAGGGCACCAAC ATGATGAGCATTATATTTAAACAAGGAGCAGCCCCTAAGATTGAGAAGATTATCCTGTCC TTCACGTCCACAACTCATATTGCTGGAATTGTTGACCTTCCAAACCTGAAGGAGCTTGAG CTGAAAGGGAATAATAATGATCGGAAGCTTGTTGCATGTCTTGCCGGTGCTCCTCACCTT TCCAGGTTAACACTCGATGGTACCTTGCTGGATCTCAATGAACTGAAAATACTGGCCGAG CTACCAAGCTTGCGCAGCCTCATTCTCCTGCAACAGTCTTGCGTCAGAAGTAGCCTCAAC TTCAACAATGGTGAGTTCAGCAAGCTCAACCTCCTTGTTGTTAATTGCTCGAACATCACC AGCATCAGCTTCACAGACGAAGGAGCAGCACCTAAGCTCGAGAAGATCACCTGGTCCTTC ACTACCAAGATGTTGTCCCTCTCTGGCATCTGCTACCTTCCGCAACTGAAGGAGCTCGAG CTCAACGGTAAAATTATCCCTGATCAGGTGATACAAGACATTAAGGAACATAAAAACAAA CCTATTTTTAATCACCAGTAAGATCGAAAAGGAGCAGAAGAAGAGAAACAACAGATGCAA ACGTATGCATCCTTCATTCGTCCATGTAAAGTTGGTGTGTGCTAGCTGCATGCTTTGTTA CAAATAAACTTGTGTCGATCTGCTTTGTGTTTCTGTTTCTAGTAGTTTTTCCCTCCCCTG TTTTTCTGTTGATTCTGTTAGAGTCACGCACATGACCTCGCTGTGTTTTCGGTCGTGTGC GACGTTGGGGCTTGTCGTGTGCGTTTAGTTCGCACGGGGGCTCGTCATGCGCGGGCACGA TCTTGGTGATTGGGATGGCAGTCGCCGTTGAGGGATCGTGTCCGCGTCAACTGGGCCAAC GTACGTGCCCATGATCTTGTATTCACAGAATAAAAGGAAGAAGATAAACAGAAAATGCTG CTCAGTTGTTCGCAGCGCC