Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0649700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25895922:25897219:-1 gene:Os11g0649700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os11t0649700-01)
Sequence

ATGTCGTACGGGTGCCAGGTCAGCGACGACGAGCCGAACGGATCGAAGGCGGTGAGCCTC
CTCCTCCGGCTGTCGACGCTGGCGCTGGCGCTCACCTCGGCGGTGGTCATGGCGACGGCG
AGCGAGTGCACCGTCGTCCAGCTCAACGGCGTCGTCGCCACCATCACCTACAAGGACTTC
CCGCCGTTCGTCTACCTCGTCGGCTTCAACATCGCCGCCGCCATGCTGGAGGCGGCGGCG
ATCTACCTGCGGCTGAGCACCGGCGGCGGCGACGACGACGACGAGGGGTTCAAGGGCAAG
CTCCCCGGGATCCTCCTCGTGGTGATCGACGTCGCCGTGCAGGCGCTCGTCTACACGGCC
ACCGGCGGCGCGTTCGCCGCCGTGTCGGCGTACGGCCCGCAGATCAACGCCTGCGGCGCC
GGCGCCGGCCGCTTCTGCGGCCAGGTGCACCAGTCGAAGCTCCTCTCGTTCGCCGGCAGC
GCCGCCGTCGGCCTCGCCGTCGTCTTCAGGGACGTCTCGCTGCCGTTCTCCCTGTGGCCC
ACCTCGTCAGACTGA

Peptide Sequence

PEP ID

Os11t0649700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25895922:25897219:-1 gene:Os11g0649700 transcript:Os11t0649700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os11t0649700-01)
Sequence

MSYGCQVSDDEPNGSKAVSLLLRLSTLALALTSAVVMATASECTVVQLNGVVATITYKDF
PPFVYLVGFNIAAAMLEAAAIYLRLSTGGGDDDDEGFKGKLPGILLVVIDVAVQALVYTA
TGGAFAAVSAYGPQINACGAGAGRFCGQVHQSKLLSFAGSAAVGLAVVFRDVSLPFSLWP
TSSD

Transcript Sequence

Transcript ID

Os11t0649700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25895922:25897219:-1 gene:Os11g0649700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os11t0649700-01)
Sequence

ATTATCAGATCAAAGTGATCGACCGACCTCATCATCAGCTAATAATTTACAAGCTTGCTT
GCAACGTGCATCGTCGTCGTCGTCGTCGTCGTCGTGATGTCGTACGGGTGCCAGGTCAGC
GACGACGAGCCGAACGGATCGAAGGCGGTGAGCCTCCTCCTCCGGCTGTCGACGCTGGCG
CTGGCGCTCACCTCGGCGGTGGTCATGGCGACGGCGAGCGAGTGCACCGTCGTCCAGCTC
AACGGCGTCGTCGCCACCATCACCTACAAGGACTTCCCGCCGTTCGTCTACCTCGTCGGC
TTCAACATCGCCGCCGCCATGCTGGAGGCGGCGGCGATCTACCTGCGGCTGAGCACCGGC
GGCGGCGACGACGACGACGAGGGGTTCAAGGGCAAGCTCCCCGGGATCCTCCTCGTGGTG
ATCGACGTCGCCGTGCAGGCGCTCGTCTACACGGCCACCGGCGGCGCGTTCGCCGCCGTG
TCGGCGTACGGCCCGCAGATCAACGCCTGCGGCGCCGGCGCCGGCCGCTTCTGCGGCCAG
GTGCACCAGTCGAAGCTCCTCTCGTTCGCCGGCAGCGCCGCCGTCGGCCTCGCCGTCGTC
TTCAGGGACGTCTCGCTGCCGTTCTCCCTGTGGCCCACCTCGTCAGACTGATGACGTCAG
AGTTGCACAAGCCGTCAGTAAATCAGTAGAATGAAGTACTAGTGTACTAGTACTCGTCTG
TCTAATAATATAAGACATTTTAGGTGAACTTGACATATAGACATCGTCCGTCTAGATTTT
TTGTATTATGATGTGTCATATTTAACTAAAATGTTTTATATTATGAAATGGAGGGAGTAT
AATGTAATTTTTCTTAATTTTCTGGG