Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0649300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25877770:25882187:-1 gene:Os11g0649300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0649300-01)
Sequence

ATGGACGGAGTTGGCGATGGCGGCGGCGGCGGCGGCCCTGCTACCGGCGGCCGAGCTGGC
CGGGGAGGCGTGCCCGATCGCCGTCCTAGGAAAAGCCGATTCTCTGTTCTTGCTTCCATG
GAAGACGACTCGGCAGAGGAAGAGTTGGAGGAGTACATGGACGACCTCGTTCGTCCAGGT
TCAGCAGCATTTCCCTCTGACCGAAAGTGGAGACAAGGACGAGCAGAATTTGCCAGGAGA
CATGGACATACAGTAGCTGGAGCTAGAACTCTTATTCGGCAAAGTGTTCTTTATTCAGAC
CGCCCCAAGCGATCCCAAGGCAGACGAGGACGAGTCAAGCCACAAACTGAATCACTGGCT
GAGAAGGATGCAAGTGAGGTGAGCAATAGTGAGCTTGGTGCTACTACTACAGACATGCCA
AAATTCAAGACACTGTCGCTGAATGATTCACCCTCTGCACTTGATTCAGCTGATAGGGCT
ACAGTGAGAGCTAGTAGCATGGATAGTGATTTACCTGATTCTGCAACTGCCAAACTCCCA
GATGTAGAGGAAGCTTTGTCGCCAAGGTCCGAGAGGAAACGGAAAATACATTTGTACCTG
GCTGAACACACATTTGATGATCTTAGGGAGGGATTCGCAGCTATGATAAATGGCTTCCGC
GACCCACCCAAAGATGCTGCTCAGCCCAATGTAGAGTTACCAGAATCATCTAAGCTTTAT
CCATGTGAGTTCGATGCTGAATCATCTCATGATTCAGAGTCTCTTTCCCCTGCAGCTGAA
GATGTAGGACGGCATAATTTGTCTACAGAAGAAATTGTTCAGAACGGAAAACGATGGATG
AGCGAGGAAGTCATGTTGGCCTTTGAAAAATATATTGAAGGAAAAAATGAATTCAGAGAT
GTGGTATACCATCTAGATGAGCTTCAGTATCAATGTTTTAGTGTGGATGCATATCAGAAG
ATTTTTCACCATTATAACTTCACAGTGAAGATGAAGAAACCCACTTCCGAAGACTGGTCA
GTGACATGTTATTTTGCTGAAGTGAAGCAAGTATACGGAAAGAAATTCTATTTATGTTGG
CCTGTGAAATCACATGATGATGGCTATTGTCATGGTTGCGCGAATCAAGGGATGGTTGCT
CTGAAGCACCCTGCGAATGATGAAGTTAAATATGAGGTTGGCTTCTTTGACACCGGCTGC
CCATTCATGTTCTTGAGCGATGATGACTCTGATGATGATGAACGTGTTTTTTCTGAGGAG
TCTATCAAGGAAATATTTAGTGGTATATTTGGTTAA

Peptide Sequence

PEP ID

Os11t0649300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25877770:25882187:-1 gene:Os11g0649300 transcript:Os11t0649300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0649300-01)
Sequence

MDGVGDGGGGGGPATGGRAGRGGVPDRRPRKSRFSVLASMEDDSAEEELEEYMDDLVRPG
SAAFPSDRKWRQGRAEFARRHGHTVAGARTLIRQSVLYSDRPKRSQGRRGRVKPQTESLA
EKDASEVSNSELGATTTDMPKFKTLSLNDSPSALDSADRATVRASSMDSDLPDSATAKLP
DVEEALSPRSERKRKIHLYLAEHTFDDLREGFAAMINGFRDPPKDAAQPNVELPESSKLY
PCEFDAESSHDSESLSPAAEDVGRHNLSTEEIVQNGKRWMSEEVMLAFEKYIEGKNEFRD
VVYHLDELQYQCFSVDAYQKIFHHYNFTVKMKKPTSEDWSVTCYFAEVKQVYGKKFYLCW
PVKSHDDGYCHGCANQGMVALKHPANDEVKYEVGFFDTGCPFMFLSDDDSDDDERVFSEE
SIKEIFSGIFG

Transcript Sequence

Transcript ID

Os11t0649300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25877770:25882187:-1 gene:Os11g0649300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0649300-01)
Sequence

GCGATGCGAACCAAACTCGACCCCAAACCCTAGAACCAAAATTCCCCAAACTCTCGCTGT
CGCCATGGACGGAGTTGGCGATGGCGGCGGCGGCGGCGGCCCTGCTACCGGCGGCCGAGC
TGGCCGGGGAGGCGTGCCCGATCGCCGTCCTAGGAAAAGCCGATTCTCTGTTCTTGCTTC
CATGGAAGACGACTCGGCAGAGGAAGAGTTGGAGGAGTACATGGACGACCTCGTTCGTCC
AGGTTCAGCAGCATTTCCCTCTGACCGAAAGTGGAGACAAGGACGAGCAGAATTTGCCAG
GAGACATGGACATACAGTAGCTGGAGCTAGAACTCTTATTCGGCAAAGTGTTCTTTATTC
AGACCGCCCCAAGCGATCCCAAGGCAGACGAGGACGAGTCAAGCCACAAACTGAATCACT
GGCTGAGAAGGATGCAAGTGAGGTGAGCAATAGTGAGCTTGGTGCTACTACTACAGACAT
GCCAAAATTCAAGACACTGTCGCTGAATGATTCACCCTCTGCACTTGATTCAGCTGATAG
GGCTACAGTGAGAGCTAGTAGCATGGATAGTGATTTACCTGATTCTGCAACTGCCAAACT
CCCAGATGTAGAGGAAGCTTTGTCGCCAAGGTCCGAGAGGAAACGGAAAATACATTTGTA
CCTGGCTGAACACACATTTGATGATCTTAGGGAGGGATTCGCAGCTATGATAAATGGCTT
CCGCGACCCACCCAAAGATGCTGCTCAGCCCAATGTAGAGTTACCAGAATCATCTAAGCT
TTATCCATGTGAGTTCGATGCTGAATCATCTCATGATTCAGAGTCTCTTTCCCCTGCAGC
TGAAGATGTAGGACGGCATAATTTGTCTACAGAAGAAATTGTTCAGAACGGAAAACGATG
GATGAGCGAGGAAGTCATGTTGGCCTTTGAAAAATATATTGAAGGAAAAAATGAATTCAG
AGATGTGGTATACCATCTAGATGAGCTTCAGTATCAATGTTTTAGTGTGGATGCATATCA
GAAGATTTTTCACCATTATAACTTCACAGTGAAGATGAAGAAACCCACTTCCGAAGACTG
GTCAGTGACATGTTATTTTGCTGAAGTGAAGCAAGTATACGGAAAGAAATTCTATTTATG
TTGGCCTGTGAAATCACATGATGATGGCTATTGTCATGGTTGCGCGAATCAAGGGATGGT
TGCTCTGAAGCACCCTGCGAATGATGAAGTTAAATATGAGGTTGGCTTCTTTGACACCGG
CTGCCCATTCATGTTCTTGAGCGATGATGACTCTGATGATGATGAACGTGTTTTTTCTGA
GGAGTCTATCAAGGAAATATTTAGTGGTATATTTGGTTAAACATGTTAAATCTTTCGAGT
TTTAGGTCATAATTTTGGATAGCTAAATATTTATATGTGAACTATATATATTAGGCCTGT
AAGACTGCAACAATGATTTTTGTTGATTTTGGTAGTATGTTGCTCGTTAAGATGTTGGCA
CATTGTATTGAAGTAGTCATGAGAACAATGTAACTCATCCTAATTATGCTCCTTAAATTA
TCACGAAAGTTTATGT