Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0648800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25834203:25836698:-1 gene:Os11g0648800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0648800-01)
Sequence

ATGGACGGCGAAGCCGGCGGCGGCCGAGCTGGCCGGGGACGGGGACGGGGAGACCGTTCC
ACTCGCCGTCGACCTGGCCGTAGGGGAACCCGACACCCTGTTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTCCTCCTGTCCTGGATTATTATAGCATCCATGACCAAACCTGGGTTAAG
GAGCGTGACGATGATGTGAGTAGCAGTGAACTTGGCCCTACAAGTAAAGATCTGTCAAAA
GTTGAGGCACTGTCACTGGATGACTCACAACATGCATCTGGTTCAACTGATTGTGTCGTG
GTACATGCTGGCAACACGGGCAGTGATGGACTTGATTCTACATTTGCACAGCCAGCAGCA
CTTGAGGAAGCTGTTTCGCCTTCGCTGTCAGAGGAGATACGCGAATATGAGGAATACTTA
AAGGAGCATACCTTTGATAGTATGGAAGCAGCTTTTGAATATCTTCGCACCGGTCAGCGT
GTAGTTTTGCCTAAGGTTGAATTTAGTGATGATGAATCAAGTTCTGAGCAGTTTTTGCTA
GAAAAATCTGAAGATCAATCAACACTAGAACCGGAACATGACAAATCAGCTGTGACACAA
GGACAATGTGATGACTCTTCTTTAGAAGGAATCACTCAGAACGGGAAAAAGTGGATGAGT
GAGGAGGCGATGGTAGCATTTGAAAAGTATATTACAAGAAGAGATGATCTTAAGGAATAT
GATTACCAATTTGATGAGCTGCTACATCAGTGCTTTAACGTGGAACATTATTACAAGATT
TTTCATCACTTCAACTTCACTGTCAAGATGAAGGCGCCCTGTTCAACTGATTGGACATCG
GTGTTATATTTTGCCGAAGTGAAGGAATTATTGGGCCATAAAATTTACTTCTGCTCTCCT
TTAGAGCCCAATGAAGATGGTAATTGCTATGCATGTAAGAACCAAGGGATGGAGAATTTG
AAGCATCCAATAGTTGGCGTGTTTGATCGAGGCTTTCCAACTCAAGTGTTCCCCTACACA
TACTCGAGTGGCTCTGAGGATGAAGCATGGCTCTGA

Peptide Sequence

PEP ID

Os11t0648800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25834203:25836698:-1 gene:Os11g0648800 transcript:Os11t0648800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0648800-01)
Sequence

MDGEAGGGRAGRGRGRGDRSTRRRPGRRGTRHPVSSSSSSSSSSPPVLDYYSIHDQTWVK
ERDDDVSSSELGPTSKDLSKVEALSLDDSQHASGSTDCVVVHAGNTGSDGLDSTFAQPAA
LEEAVSPSLSEEIREYEEYLKEHTFDSMEAAFEYLRTGQRVVLPKVEFSDDESSSEQFLL
EKSEDQSTLEPEHDKSAVTQGQCDDSSLEGITQNGKKWMSEEAMVAFEKYITRRDDLKEY
DYQFDELLHQCFNVEHYYKIFHHFNFTVKMKAPCSTDWTSVLYFAEVKELLGHKIYFCSP
LEPNEDGNCYACKNQGMENLKHPIVGVFDRGFPTQVFPYTYSSGSEDEAWL

Transcript Sequence

Transcript ID

Os11t0648800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25834203:25836698:-1 gene:Os11g0648800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os11t0648800-01)
Sequence

GAGGGACCAAACCTCAATCATCAGTCCATCAGGTAGGAGAAGAGGTAGGCAGCTGAGGAG
TGAAAGAACCCTAAAACCAAAATTCCCCAACTCTCGCTGTCGCCATGGACGGCGAAGCCG
GCGGCGGCCGAGCTGGCCGGGGACGGGGACGGGGAGACCGTTCCACTCGCCGTCGACCTG
GCCGTAGGGGAACCCGACACCCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTC
CTGTCCTGGATTATTATAGCATCCATGACCAAACCTGGGTTAAGGAGCGTGACGATGATG
TGAGTAGCAGTGAACTTGGCCCTACAAGTAAAGATCTGTCAAAAGTTGAGGCACTGTCAC
TGGATGACTCACAACATGCATCTGGTTCAACTGATTGTGTCGTGGTACATGCTGGCAACA
CGGGCAGTGATGGACTTGATTCTACATTTGCACAGCCAGCAGCACTTGAGGAAGCTGTTT
CGCCTTCGCTGTCAGAGGAGATACGCGAATATGAGGAATACTTAAAGGAGCATACCTTTG
ATAGTATGGAAGCAGCTTTTGAATATCTTCGCACCGGTCAGCGTGTAGTTTTGCCTAAGG
TTGAATTTAGTGATGATGAATCAAGTTCTGAGCAGTTTTTGCTAGAAAAATCTGAAGATC
AATCAACACTAGAACCGGAACATGACAAATCAGCTGTGACACAAGGACAATGTGATGACT
CTTCTTTAGAAGGAATCACTCAGAACGGGAAAAAGTGGATGAGTGAGGAGGCGATGGTAG
CATTTGAAAAGTATATTACAAGAAGAGATGATCTTAAGGAATATGATTACCAATTTGATG
AGCTGCTACATCAGTGCTTTAACGTGGAACATTATTACAAGATTTTTCATCACTTCAACT
TCACTGTCAAGATGAAGGCGCCCTGTTCAACTGATTGGACATCGGTGTTATATTTTGCCG
AAGTGAAGGAATTATTGGGCCATAAAATTTACTTCTGCTCTCCTTTAGAGCCCAATGAAG
ATGGTAATTGCTATGCATGTAAGAACCAAGGGATGGAGAATTTGAAGCATCCAATAGTTG
GCGTGTTTGATCGAGGCTTTCCAACTCAAGTGTTCCCCTACACATACTCGAGTGGCTCTG
AGGATGAAGCATGGCTCTGATCATCGATGGAGCTGACGCCGATTATTACTCCAGTGTGTA
ATGCGTTTTAGACTCGATTAATCGGCTCGATCCCTAGACTGAACCAATTAATCAACGCGT
CTTTGCATGCTACAACTCGTGTCAGCATGAGCATGGGCTGAAAACTACATATGCATTATC
ATTGATCTCGTTTGTGAATGCTGAACTCTGTAGTTGTGATTGGTAGTCGATGCAAGAGTT
AGTAGATCTTGTTTCTATCTATATTTATGTAACTCGCAAATTTGTGAATGCTAACTTGTT
AACTTTCAAACTCATGCATGCATGGTTGATGCGTGTGTAGCCAC