Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0645400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25617774:25618559:1 gene:Os11g0645400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0645400-01)
Sequence

ATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTC
GCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCAC
GACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCAC
TTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCG
GCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTCGTCGGGGAACCCGGAGCTGCTG
GTGACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCGCCGGCAGCTCGGTCACCGTCGTC
GGGAGGGACGACATCGCGGCGCCGGTGAGGGAGCTGTCGGTGGTCGGCGGCACGGGGGAG
TTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCC
ATCCTCGAGCTCGACGTCTACGTCAACCCCTGA

Peptide Sequence

PEP ID

Os11t0645400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25617774:25618559:1 gene:Os11g0645400 transcript:Os11t0645400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0645400-01)
Sequence

MASSSKLSSAFALAVVVLLLAGGVMPAAEAASAHLHFFMHDTLTGAAPTAVQVVNGPRSH
FGDTIVIDDVLTAAASRSSAAVGRAKGQYVWASSGNPELLVTMEVVLTSGPFAGSSVTVV
GRDDIAAPVRELSVVGGTGEFRMASGYVLWKTVSLDHPNAILELDVYVNP

Transcript Sequence

Transcript ID

Os11t0645400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25617774:25618559:1 gene:Os11g0645400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0645400-01)
Sequence

ATTCCGTGTCAGTCATCAGTGTTCGCCATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTC
GCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCG
TCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTG
CAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTG
ACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGG
GCGTCGTCGGGGAACCCGGAGCTGCTGGTGACCATGGAGGTGGTGCTGACGTCGGGGCCG
TTCGCCGGCAGCTCGGTCACCGTCGTCGGGAGGGACGACATCGCGGCGCCGGTGAGGGAG
CTGTCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAG
ACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGA
GATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGCAT
GACGTGGCGTGTGCCAGCACACGACACATGTCGCAGCTGCCACGGATGCTACACTACCTT
ACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACA
AGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCA
ATTATC