Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0645200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25614690:25617362:1 gene:Os11g0645200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, aldo/keto reductase family protein, expressed. (Os11t0645200-01)
Sequence

ATGTCGATGCCCACCTTCCACCTCGCCCCCGACCTCGCCGTCTCCCGCCTCTGCTTCGGG
ACGATGACGATGGGGGAGCAGAGCCGGCTGCCGGAGTCGCTCCGCCTCCTCGACGCCGCA
TTCGACGCCGGCGTCAACTTCTTCGACTCCGCCGAGATGTACCCGGTCCCACAGCGCAGT
GAGACGCACGGGCGCAGCGAGGAGTTCCTCGGCCGCTGGCTGCGGGCCCGCCGGGCCCCA
CGTGACAGCGTCGTGCTCGCCACTAAGGTCGCCGGGCCGTCCGGGGAGATGACGTGGATC
CGCGGCGGGCCGGCGTCGCTCGATTCGCGGAACATCGCGGAGGCGATTGATGGAAGCTAT
GTCCCGATGTTTGGAGAGACAGAATATGATCCAAGCCATCAGTATATGTCTGTTCCAATG
GAAGAGCAGCTACTGGCTCTTGGAAGAGCCATAGACGCTGGCAAGATTAGGTACATTGGC
CTTAGCAATGAAACACCATATGGGTTGATGAAGTTCCTTCAACTGAGTAGAGATTCCCAG
CTGCACTCCAAGATACTGACAGTGCAAAACTCATATAACCTGCTATGTCGAAATTTTGAT
GCTGGGCTAGCTGAATGCTGCCACCATGAGAGAATCAACTTGCTAGCTTACAGCCCAATG
GCCATGGGTATACTTTCAGGGAAGTATTACTCATCGGATGATGGCGGCCCACCAGATGCA
AGAATGAATCTTTTCAAAGGGAGATACTCTGAGGGTGAATCCAGATATAATCTTCAGAAC
CCCAAAATGAAAGCTGCTGTGAAGGAATACGTAAAAATTTCTGCTAAGCATGGGATTTCG
CCAGCGATTCTAGCAGTTGCGTTTGTTCTGAGGCACCCCCTTGTGTCATCGGCTGTTTTC
GGCGCGACAGAAATTTCGCAACTTACAGAAGTTCTTCAGGCCACCAGGATCCATCTCTCT
GAGGAGATTGTTGCAGAGATCAATGAAGTTCATGCAAGATATCCCAACCCTTGCCCATAA

Peptide Sequence

PEP ID

Os11t0645200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25614690:25617362:1 gene:Os11g0645200 transcript:Os11t0645200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, aldo/keto reductase family protein, expressed. (Os11t0645200-01)
Sequence

MSMPTFHLAPDLAVSRLCFGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYPVPQRS
ETHGRSEEFLGRWLRARRAPRDSVVLATKVAGPSGEMTWIRGGPASLDSRNIAEAIDGSY
VPMFGETEYDPSHQYMSVPMEEQLLALGRAIDAGKIRYIGLSNETPYGLMKFLQLSRDSQ
LHSKILTVQNSYNLLCRNFDAGLAECCHHERINLLAYSPMAMGILSGKYYSSDDGGPPDA
RMNLFKGRYSEGESRYNLQNPKMKAAVKEYVKISAKHGISPAILAVAFVLRHPLVSSAVF
GATEISQLTEVLQATRIHLSEEIVAEINEVHARYPNPCP

Transcript Sequence

Transcript ID

Os11t0645200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25614690:25617362:1 gene:Os11g0645200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, aldo/keto reductase family protein, expressed. (Os11t0645200-01)
Sequence

CTCCATGGCGGAGGAGAGGGATTAGCCACAGTGCGGCGCGGAGGACGACGGCGATGTCGA
TGCCCACCTTCCACCTCGCCCCCGACCTCGCCGTCTCCCGCCTCTGCTTCGGGACGATGA
CGATGGGGGAGCAGAGCCGGCTGCCGGAGTCGCTCCGCCTCCTCGACGCCGCATTCGACG
CCGGCGTCAACTTCTTCGACTCCGCCGAGATGTACCCGGTCCCACAGCGCAGTGAGACGC
ACGGGCGCAGCGAGGAGTTCCTCGGCCGCTGGCTGCGGGCCCGCCGGGCCCCACGTGACA
GCGTCGTGCTCGCCACTAAGGTCGCCGGGCCGTCCGGGGAGATGACGTGGATCCGCGGCG
GGCCGGCGTCGCTCGATTCGCGGAACATCGCGGAGGCGATTGATGGAAGCTATGTCCCGA
TGTTTGGAGAGACAGAATATGATCCAAGCCATCAGTATATGTCTGTTCCAATGGAAGAGC
AGCTACTGGCTCTTGGAAGAGCCATAGACGCTGGCAAGATTAGGTACATTGGCCTTAGCA
ATGAAACACCATATGGGTTGATGAAGTTCCTTCAACTGAGTAGAGATTCCCAGCTGCACT
CCAAGATACTGACAGTGCAAAACTCATATAACCTGCTATGTCGAAATTTTGATGCTGGGC
TAGCTGAATGCTGCCACCATGAGAGAATCAACTTGCTAGCTTACAGCCCAATGGCCATGG
GTATACTTTCAGGGAAGTATTACTCATCGGATGATGGCGGCCCACCAGATGCAAGAATGA
ATCTTTTCAAAGGGAGATACTCTGAGGGTGAATCCAGATATAATCTTCAGAACCCCAAAA
TGAAAGCTGCTGTGAAGGAATACGTAAAAATTTCTGCTAAGCATGGGATTTCGCCAGCGA
TTCTAGCAGTTGCGTTTGTTCTGAGGCACCCCCTTGTGTCATCGGCTGTTTTCGGCGCGA
CAGAAATTTCGCAACTTACAGAAGTTCTTCAGGCCACCAGGATCCATCTCTCTGAGGAGA
TTGTTGCAGAGATCAATGAAGTTCATGCAAGATATCCCAACCCTTGCCCATAAGAAGTTC
AGAACAGAACACAGTAGTCAGATCTTCTCTTTGTCTTTCTTGTTCTGTAGATTGCAAATT
TGCAATGTCATATGATCATCAGTGAGTAACAGTTAGCAGTTTTGCCAAGGATGAGTTATT
CAACTTGTCCTATTGTTGTTGCCAATGCCAACAAGTGATTATCTGATAAATTGCATT