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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0644100-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:25552080:25553309:1 gene:Os11g0644100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0644100-00)
Sequence

ATGCGCATGGTGGCCGCGCGGCGCCCGCGGGCGCTAATGCTGCTCGCCGCCGTCCTCCTC
GTGGCGGTGCCCGTGGCGGCGGCGACGCTGCACCCGGTGGACTACCTGGCGCTGCAGGCG
GTGCGGCGCGCGCTGTCGGACATGCCGGGGTCGAGGTTCTTCGCGTCGTGGGACTTCACC
GGCGACCCCTGCGGGTTCGCGGGCGTGTCGTGCTCGGGCGACGGCCGCGTCGTCACCCTG
GCGCTCGGCGACCCGCGCGCGGGGGCGCCGGGGCTGTCCGGCGCGCTCCCCGCCGCCGCG
CTGGCGCGGCTCTCCGAGCTCGCGTCGCTGTCGCTCGTCCCCGGGCGCGTGTCCGGGGAG
CTCCCCCCCGCCGTCGCCGCGCTCCCGTCGCTCCGGTTCCTGGCGCTCGCCGGGAACCTC
CTCTCCGGCGACCTCCCCGCCACGTTCTCCCCCATGCTCCGCACCGTCGACCTCAGCAAG
AACTCATTCTCCGGCAGGATACCGCCGTCGCTGCCCCTCATCCGGAGCCTCCGGACGCTC
GTCCTCTCCCACAACTCCCTCTCCGGCGAGATTCCCAAGCTGGTGAGCTCCCCGTTGGTC
CATCTCGACCTCAGGAACAACCGCCTCACCGGCGGCGTCCCGCCGCTGCCGGCGACGCTC
GTGTACCTGTCCCTCGCCGGGAACAGGTTCTCCGGCCGCGTCGGCGGCGTGCTCCGGAGG
CTCCCGAGGCTCTCGTTCCTTGACCTCGGCGGCAACTGGTTCTCCGGCGAGGTCCCCGGC
GAGGTGTTCTCCTTCCGGATCAGCTACCTGCAGCTCCGCAAGAACGCGTTCTCGGGCGAG
CTCCGGCCATCGGGGCGGGTGCCAGCCGGCGCCACGGTGGACCTCAGCCACAACGCGCTG
TCCGGGCGCGTCCCCGCCGAGCTGGCGCCGGCGGCGGCGGTGTACCTGAACGGGAACAAG
TTCGCCGGCCAGGTGCCGCGGGAGATCGCCGCGGCGGCGGAGGGCGGCCGGATGCGGGTG
CTCTTCTTGCAGGACAACTTCCTGACCGGCATCGGCGTGGGCGGCGTCCCGGCGAGCGCC
GCCGTGTGCGCGCACATGAACTGCGTGGCGCCGCCGCCGCCGGTGGTGGCGGCGTGCCCG
GCGAAGGGCGGCAGGGGTCGCCGCCGGCCGCCGTCGCAGTGCGGCGGCCGGAGGCGGTGA

Peptide Sequence

PEP ID

Os11t0644100-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:25552080:25553309:1 gene:Os11g0644100 transcript:Os11t0644100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0644100-00)
Sequence

MRMVAARRPRALMLLAAVLLVAVPVAAATLHPVDYLALQAVRRALSDMPGSRFFASWDFT
GDPCGFAGVSCSGDGRVVTLALGDPRAGAPGLSGALPAAALARLSELASLSLVPGRVSGE
LPPAVAALPSLRFLALAGNLLSGDLPATFSPMLRTVDLSKNSFSGRIPPSLPLIRSLRTL
VLSHNSLSGEIPKLVSSPLVHLDLRNNRLTGGVPPLPATLVYLSLAGNRFSGRVGGVLRR
LPRLSFLDLGGNWFSGEVPGEVFSFRISYLQLRKNAFSGELRPSGRVPAGATVDLSHNAL
SGRVPAELAPAAAVYLNGNKFAGQVPREIAAAAEGGRMRVLFLQDNFLTGIGVGGVPASA
AVCAHMNCVAPPPPVVAACPAKGGRGRRRPPSQCGGRRR

Transcript Sequence

Transcript ID

Os11t0644100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25552080:25553309:1 gene:Os11g0644100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os11t0644100-00)
Sequence

CCTCCTCCTCCTTCTCGATCTTCTCGATGCGCATGGTGGCCGCGCGGCGCCCGCGGGCGC
TAATGCTGCTCGCCGCCGTCCTCCTCGTGGCGGTGCCCGTGGCGGCGGCGACGCTGCACC
CGGTGGACTACCTGGCGCTGCAGGCGGTGCGGCGCGCGCTGTCGGACATGCCGGGGTCGA
GGTTCTTCGCGTCGTGGGACTTCACCGGCGACCCCTGCGGGTTCGCGGGCGTGTCGTGCT
CGGGCGACGGCCGCGTCGTCACCCTGGCGCTCGGCGACCCGCGCGCGGGGGCGCCGGGGC
TGTCCGGCGCGCTCCCCGCCGCCGCGCTGGCGCGGCTCTCCGAGCTCGCGTCGCTGTCGC
TCGTCCCCGGGCGCGTGTCCGGGGAGCTCCCCCCCGCCGTCGCCGCGCTCCCGTCGCTCC
GGTTCCTGGCGCTCGCCGGGAACCTCCTCTCCGGCGACCTCCCCGCCACGTTCTCCCCCA
TGCTCCGCACCGTCGACCTCAGCAAGAACTCATTCTCCGGCAGGATACCGCCGTCGCTGC
CCCTCATCCGGAGCCTCCGGACGCTCGTCCTCTCCCACAACTCCCTCTCCGGCGAGATTC
CCAAGCTGGTGAGCTCCCCGTTGGTCCATCTCGACCTCAGGAACAACCGCCTCACCGGCG
GCGTCCCGCCGCTGCCGGCGACGCTCGTGTACCTGTCCCTCGCCGGGAACAGGTTCTCCG
GCCGCGTCGGCGGCGTGCTCCGGAGGCTCCCGAGGCTCTCGTTCCTTGACCTCGGCGGCA
ACTGGTTCTCCGGCGAGGTCCCCGGCGAGGTGTTCTCCTTCCGGATCAGCTACCTGCAGC
TCCGCAAGAACGCGTTCTCGGGCGAGCTCCGGCCATCGGGGCGGGTGCCAGCCGGCGCCA
CGGTGGACCTCAGCCACAACGCGCTGTCCGGGCGCGTCCCCGCCGAGCTGGCGCCGGCGG
CGGCGGTGTACCTGAACGGGAACAAGTTCGCCGGCCAGGTGCCGCGGGAGATCGCCGCGG
CGGCGGAGGGCGGCCGGATGCGGGTGCTCTTCTTGCAGGACAACTTCCTGACCGGCATCG
GCGTGGGCGGCGTCCCGGCGAGCGCCGCCGTGTGCGCGCACATGAACTGCGTGGCGCCGC
CGCCGCCGGTGGTGGCGGCGTGCCCGGCGAAGGGCGGCAGGGGTCGCCGCCGGCCGCCGT
CGCAGTGCGGCGGCCGGAGGCGGTGAGGTG