Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0643800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25537073:25540452:-1 gene:Os11g0643800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sugar transporter family protein, expressed. (Os11t0643800-01)
Sequence

ATGGGAGTGTCCAGTGGTGCAAGCGAGTCCCTCCTTCCCCGGGCCGGCGGCGATGGATCG
CTGGCCATGGTCATCGCCAGCACCGGCGTTGCCGTGCTCGGCTCCTTCGTCTTCGGCGTC
TCGATTGGTTACTCAGCACCAACTCAGTCCAAGATCAGGGAGGATCTTCAGCTCTCGCTC
TCCGAGTATTCGGTTTTCGGATCAATAATAACAATTGGGGCAATGATAGGAGCAGTTGCA
AGTGGGCACCTTGCTGACATTTCTGGAAGAAAAGGGGCAATGAGGACTTCTGCTCTTGTT
TGCATTGTCGGATGGCTTGCAATCTTCTTTGCACAAGGTGCTGTTTCACTTGATTTTGGG
AGATTCTGTACCGGATTTGGAGTAGGAGTATTTTCATATGTGGTACCGGTTTTCATAGCA
GAAATAGCTCCGAAAGCTCTTCGTGGGGGGCTTACAACACTGAACCAATTGCTGGTGTGC
ACTGGGTTATCTGTTACTTATATTGTCGGTACTATGGTGACATGGCGCATGTTGGTCATA
GCAGGACTTGTACCGTCCATAATTCTTATAGTTGGTCTTTCCTTCATTCCTGAATCCCCT
CGGTGGCTGGCAAAGGTTGGACGGCAAAAGGAGTTTGAAATAGCGCTCCAACGCCTCCGT
GGTAAAGATGCGGATGTGTCCATTGAAGCTGCAGAAATCAAGGAGTTCATTGAGACCATT
GAAAACCTTCCAAAGGCTGGAGTTCAGGATCTTTTCAACAGAGCCTACATCCGTCCTGTC
ATTGTTGGTGTTGGCCTGATGGTGTTCCAGCAGTTTGTAGGAATTAATGGAATCTTGTTC
TATGCCAGTGAAACTTTTGTATCAGCCGGGTTTGCTTCAGGAGACCTAGGAACAATCTTG
ATGGGGTGTATCCAGGCGCCAATCACAGCTGTTGGAGCATTACTGATGGACAGAAGTGGT
AGAAGGCCACTGCTGTTGATTTCAACATCAGGACTCCTAATTGGCTCTCTCATGTCAGCA
GTATCCTTCTACCTGAAGATTCATGGGCTTTTCTTGGAGCAAGTACCAATCATCGCACTC
ACTGGCATATTGGTGTACATTGCTAGCTATTCAATAGGAATGGGGGCAGTCCCTTGGGTC
ATAATGTCAGAGATATTTCCCATAAATATAAAAGGAATCGGTGGAAGCTTTGTGACTCTG
GTGAACTGGTCCGGTTCATGGGCAGTTTCTTTTGCCTTCAACTTCTTCATGAGCTGGAGT
TCTTCAGGGACATTCTTCCTTTTCGCATTAGTTTGCGCAGTGGCCATCCTTTTCATTGTG
AAGATCGTGCCAGAGACAAAAGGCAAAACTCTGGAGGAGATTCAGGCCTCAATGAATAGT
AGCACATAG

Peptide Sequence

PEP ID

Os11t0643800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25537073:25540452:-1 gene:Os11g0643800 transcript:Os11t0643800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sugar transporter family protein, expressed. (Os11t0643800-01)
Sequence

MGVSSGASESLLPRAGGDGSLAMVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSL
SEYSVFGSIITIGAMIGAVASGHLADISGRKGAMRTSALVCIVGWLAIFFAQGAVSLDFG
RFCTGFGVGVFSYVVPVFIAEIAPKALRGGLTTLNQLLVCTGLSVTYIVGTMVTWRMLVI
AGLVPSIILIVGLSFIPESPRWLAKVGRQKEFEIALQRLRGKDADVSIEAAEIKEFIETI
ENLPKAGVQDLFNRAYIRPVIVGVGLMVFQQFVGINGILFYASETFVSAGFASGDLGTIL
MGCIQAPITAVGALLMDRSGRRPLLLISTSGLLIGSLMSAVSFYLKIHGLFLEQVPIIAL
TGILVYIASYSIGMGAVPWVIMSEIFPINIKGIGGSFVTLVNWSGSWAVSFAFNFFMSWS
SSGTFFLFALVCAVAILFIVKIVPETKGKTLEEIQASMNSST

Transcript Sequence

Transcript ID

Os11t0643800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25537073:25540452:-1 gene:Os11g0643800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sugar transporter family protein, expressed. (Os11t0643800-01)
Sequence

GTAGCTTCAGTTCAAGCAAGAACTGAACTTGTTGAAGGTTAGCATCAGTTAGCAGCTAAG
GCCATCGCCATGGGAGTGTCCAGTGGTGCAAGCGAGTCCCTCCTTCCCCGGGCCGGCGGC
GATGGATCGCTGGCCATGGTCATCGCCAGCACCGGCGTTGCCGTGCTCGGCTCCTTCGTC
TTCGGCGTCTCGATTGGTTACTCAGCACCAACTCAGTCCAAGATCAGGGAGGATCTTCAG
CTCTCGCTCTCCGAGTATTCGGTTTTCGGATCAATAATAACAATTGGGGCAATGATAGGA
GCAGTTGCAAGTGGGCACCTTGCTGACATTTCTGGAAGAAAAGGGGCAATGAGGACTTCT
GCTCTTGTTTGCATTGTCGGATGGCTTGCAATCTTCTTTGCACAAGGTGCTGTTTCACTT
GATTTTGGGAGATTCTGTACCGGATTTGGAGTAGGAGTATTTTCATATGTGGTACCGGTT
TTCATAGCAGAAATAGCTCCGAAAGCTCTTCGTGGGGGGCTTACAACACTGAACCAATTG
CTGGTGTGCACTGGGTTATCTGTTACTTATATTGTCGGTACTATGGTGACATGGCGCATG
TTGGTCATAGCAGGACTTGTACCGTCCATAATTCTTATAGTTGGTCTTTCCTTCATTCCT
GAATCCCCTCGGTGGCTGGCAAAGGTTGGACGGCAAAAGGAGTTTGAAATAGCGCTCCAA
CGCCTCCGTGGTAAAGATGCGGATGTGTCCATTGAAGCTGCAGAAATCAAGGAGTTCATT
GAGACCATTGAAAACCTTCCAAAGGCTGGAGTTCAGGATCTTTTCAACAGAGCCTACATC
CGTCCTGTCATTGTTGGTGTTGGCCTGATGGTGTTCCAGCAGTTTGTAGGAATTAATGGA
ATCTTGTTCTATGCCAGTGAAACTTTTGTATCAGCCGGGTTTGCTTCAGGAGACCTAGGA
ACAATCTTGATGGGGTGTATCCAGGCGCCAATCACAGCTGTTGGAGCATTACTGATGGAC
AGAAGTGGTAGAAGGCCACTGCTGTTGATTTCAACATCAGGACTCCTAATTGGCTCTCTC
ATGTCAGCAGTATCCTTCTACCTGAAGATTCATGGGCTTTTCTTGGAGCAAGTACCAATC
ATCGCACTCACTGGCATATTGGTGTACATTGCTAGCTATTCAATAGGAATGGGGGCAGTC
CCTTGGGTCATAATGTCAGAGATATTTCCCATAAATATAAAAGGAATCGGTGGAAGCTTT
GTGACTCTGGTGAACTGGTCCGGTTCATGGGCAGTTTCTTTTGCCTTCAACTTCTTCATG
AGCTGGAGTTCTTCAGGGACATTCTTCCTTTTCGCATTAGTTTGCGCAGTGGCCATCCTT
TTCATTGTGAAGATCGTGCCAGAGACAAAAGGCAAAACTCTGGAGGAGATTCAGGCCTCA
ATGAATAGTAGCACATAGGTGCCAAAGGGAAAACAGAAGCCCTGACACTTTTTTGTCGGT
CCATGCACTTGTTGAAAGCCATTTACCGGTTTGAGTCTTTTCTGCTCTGTAATAGAATTC
AAGTTCATTTGCTGCTGCTATCAGCCAGTTCAGTCTTTCAAACAGTGCAAAAGAAATATA
GTGAAAATAAAAGGCTGAGATCAATAGATATTGAGTTTGACAACCAGATAACCTTTTTAC
ATTTGTTTTCAACTCTTCTGATGGAGCATGAACAACACAGTTACTTAC