Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0641800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:25432425:25434791:1 gene:Os11g0641800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 24 description:Similar to Laccase-20. (Os11t0641800-01)
Sequence	ATGGTGGCCTCTCTCCTTTGCACCGTCGCCGTTGCGGTTCTCGCCGTGGCAGCGGTCGGC GGCGAGGCGGGGGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGTGACGCACTTG TGCAACACGACCAAGATCTTTGTGGTGAATGGGCAGTTACCGGGCCCGACGGTGGACGTG ACAGAGGGTGACACAGTGGTCATCCACGTCGTCAACAAAATACCACATGGGCTTACCATC CACTGGCACGGTGTTCGCCAATTGAGGAGCTGCTGGGCCGATGGGGCAGGCTTCATCACC GAGTGCCCCATCCCGCCTGGCAGTGAGCGCACCTACCGCTTCAATGTTACCGACCAAGTC GGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGCTCCACCATCAACGGCGCATTC ATCATCCGTCCCCGCGATGGGAAGTACCCCTTCCCGACACCCGTCAAGGATGTACCGATC ATCATAGGTGAATGGTGGGAGCTCGACCTCGTTGAGCTGGACAGGAGGATGAGGGATGGC AACTTCGACGACAACCCGTTGTCGGCTACGATCAACGGGAAGCTTGGCGACCTTAGCAAC TGCTCCGGCATAGTGGAGGAGAGCTTTGTTCTCAACGTGAAGCATGGGGAGAGCTACCTT CTCCGGGTCATCAACACTGCATTCTTCTCCGAATACTATTTCAAGGTCGCCGGCCACACG TTCACGGTGGTTGGCGCTGATGGCAACTACCTGACGCCGTTCAAGACAGACATGGTCACC GTTGCCCCCGGCGAGGCCATTGACGTGCTCATGGTCGCCGACGCCCCACCAGCCCACTAT CACATGATCGCGTTGGCTAACCAACCACCGGAGCCAGACCCACAGATCCCGAAGTACATC TCTCGTGGCCTCGTCCGCTACACCGGTGTCGATGCCAACAACAATGGCCTACCGGTCCCA ATGCCGATCATGCCTAACCAACACAACACCATGCCATCCTACTACTTCCATGCCAATCTT ACTGGCCTCATGCATCCGAAGCATCGTCGTGTGCCCATGCACGTCGACGAGCGTATCTTC ATCATCCTTGGGCTTGGTACCATCTGTCGTGGTCGGAACACCACCTGCAAGCGGCAGCGC AGCCTGGAGACCATCGAGGTGGCCACCATGAACAATGTCTCCTTCACCCACCCAAACACC ACTGCGCTCCTCGAGCGCTACTACGACGGCACTCCAGAAGGCGTTTACACGGAGGACTTC CCCGTTCGGCCACCACGGCCATACAACTACACCAACCCTGCTCTCATCCCTCCTGGCCCT CTCGAAGAGGTGCTGGAGCCAACATTCAAGGCGACCAAGCTGAAACGGTTCAAGTATAAC ACATCAGTGGAGATCATCTTCCAAAGCAGCACGTTGTTGATGAGTGACTCCAACCCCATG CACCTCCATGGCTATGACGTCTTCCTCCTTGCGCAGGGGCTTGGCAGCTTCAACGCCAAG AGGGACATCAGGAAGTTCAACTACCACAACCCTCAGCTCAGGAACACCATATTGGTTCCC CGCGGTGGTTGGGCCGCCGTCCGCTTCATCACAGACAATCCAGGGATGTGGTACTTGCAC TGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGTGGAGGATGGG CCAACACCGGAGACGAGCCTGCCTCCACCGCCGCCGGAGTTCAAGAGATGTGATGCCTCT TGA

Peptide Sequence

PEP ID	Os11t0641800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:25432425:25434791:1 gene:Os11g0641800 transcript:Os11t0641800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 24 description:Similar to Laccase-20. (Os11t0641800-01)
Sequence	MVASLLCTVAVAVLAVAAVGGEAGVVEHTFVVHEMNVTHLCNTTKIFVVNGQLPGPTVDV TEGDTVVIHVVNKIPHGLTIHWHGVRQLRSCWADGAGFITECPIPPGSERTYRFNVTDQV GTLWWHAHVTCLRSTINGAFIIRPRDGKYPFPTPVKDVPIIIGEWWELDLVELDRRMRDG NFDDNPLSATINGKLGDLSNCSGIVEESFVLNVKHGESYLLRVINTAFFSEYYFKVAGHT FTVVGADGNYLTPFKTDMVTVAPGEAIDVLMVADAPPAHYHMIALANQPPEPDPQIPKYI SRGLVRYTGVDANNNGLPVPMPIMPNQHNTMPSYYFHANLTGLMHPKHRRVPMHVDERIF IILGLGTICRGRNTTCKRQRSLETIEVATMNNVSFTHPNTTALLERYYDGTPEGVYTEDF PVRPPRPYNYTNPALIPPGPLEEVLEPTFKATKLKRFKYNTSVEIIFQSSTLLMSDSNPM HLHGYDVFLLAQGLGSFNAKRDIRKFNYHNPQLRNTILVPRGGWAAVRFITDNPGMWYLH CHFEFHIIMGMATAFIVEDGPTPETSLPPPPPEFKRCDAS

Transcript Sequence

Transcript ID	Os11t0641800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:25432425:25434791:1 gene:Os11g0641800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 24 description:Similar to Laccase-20. (Os11t0641800-01)
Sequence	ATGGCTTCATCAGAAAATCCATGAAGATAATTGAGCTTGGTTCTAACAGCTAATAGCTGA TCAGACCACCATGGTGGCCTCTCTCCTTTGCACCGTCGCCGTTGCGGTTCTCGCCGTGGC AGCGGTCGGCGGCGAGGCGGGGGTGGTGGAGCACACCTTCGTGGTGCACGAGATGAACGT GACGCACTTGTGCAACACGACCAAGATCTTTGTGGTGAATGGGCAGTTACCGGGCCCGAC GGTGGACGTGACAGAGGGTGACACAGTGGTCATCCACGTCGTCAACAAAATACCACATGG GCTTACCATCCACTGGCACGGTGTTCGCCAATTGAGGAGCTGCTGGGCCGATGGGGCAGG CTTCATCACCGAGTGCCCCATCCCGCCTGGCAGTGAGCGCACCTACCGCTTCAATGTTAC CGACCAAGTCGGCACGCTGTGGTGGCACGCCCACGTCACCTGCCTCCGCTCCACCATCAA CGGCGCATTCATCATCCGTCCCCGCGATGGGAAGTACCCCTTCCCGACACCCGTCAAGGA TGTACCGATCATCATAGGTGAATGGTGGGAGCTCGACCTCGTTGAGCTGGACAGGAGGAT GAGGGATGGCAACTTCGACGACAACCCGTTGTCGGCTACGATCAACGGGAAGCTTGGCGA CCTTAGCAACTGCTCCGGCATAGTGGAGGAGAGCTTTGTTCTCAACGTGAAGCATGGGGA GAGCTACCTTCTCCGGGTCATCAACACTGCATTCTTCTCCGAATACTATTTCAAGGTCGC CGGCCACACGTTCACGGTGGTTGGCGCTGATGGCAACTACCTGACGCCGTTCAAGACAGA CATGGTCACCGTTGCCCCCGGCGAGGCCATTGACGTGCTCATGGTCGCCGACGCCCCACC AGCCCACTATCACATGATCGCGTTGGCTAACCAACCACCGGAGCCAGACCCACAGATCCC GAAGTACATCTCTCGTGGCCTCGTCCGCTACACCGGTGTCGATGCCAACAACAATGGCCT ACCGGTCCCAATGCCGATCATGCCTAACCAACACAACACCATGCCATCCTACTACTTCCA TGCCAATCTTACTGGCCTCATGCATCCGAAGCATCGTCGTGTGCCCATGCACGTCGACGA GCGTATCTTCATCATCCTTGGGCTTGGTACCATCTGTCGTGGTCGGAACACCACCTGCAA GCGGCAGCGCAGCCTGGAGACCATCGAGGTGGCCACCATGAACAATGTCTCCTTCACCCA CCCAAACACCACTGCGCTCCTCGAGCGCTACTACGACGGCACTCCAGAAGGCGTTTACAC GGAGGACTTCCCCGTTCGGCCACCACGGCCATACAACTACACCAACCCTGCTCTCATCCC TCCTGGCCCTCTCGAAGAGGTGCTGGAGCCAACATTCAAGGCGACCAAGCTGAAACGGTT CAAGTATAACACATCAGTGGAGATCATCTTCCAAAGCAGCACGTTGTTGATGAGTGACTC CAACCCCATGCACCTCCATGGCTATGACGTCTTCCTCCTTGCGCAGGGGCTTGGCAGCTT CAACGCCAAGAGGGACATCAGGAAGTTCAACTACCACAACCCTCAGCTCAGGAACACCAT ATTGGTTCCCCGCGGTGGTTGGGCCGCCGTCCGCTTCATCACAGACAATCCAGGGATGTG GTACTTGCACTGTCACTTTGAGTTCCACATCATTATGGGCATGGCGACGGCGTTCATCGT GGAGGATGGGCCAACACCGGAGACGAGCCTGCCTCCACCGCCGCCGGAGTTCAAGAGATG TGATGCCTCTTGAAACAACTTATCCTAACAACTATGGCAAGGACCTTCCTCCTCTTTGCC AGTATTCACTAGATAATGGCATTGCCTTTGGGGCATTTTATTCTTGTATTGCATTAGTTA AGACGTACATGTTAAATTCCAGCGTGCACAAGCCGGTCCAGGCCATGTGGTCATCAGCTT CAGGCCAAGGTCACGAAAAGCACAACTTGATCATCTGCATCTTGTTATGTACTCCCTCCG TTTTTTGTTTGATTTTTTTTTCTTGTCAAACTTCTTTAATTTAACCAAATTTAT