Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0637200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:25165988:25167744:-1 gene:Os11g0637200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorbitol transporter. (Os11t0637200-01)
Sequence

ATGGCGCACGCCGGCGATGCCACGGCGCCGCTCCTCTCCTCGCCGGCCAAGCCCGGCGAC
GAGCCCCGCCGCAACATGTACGCCTTCGGCTGCGCCACCCTCGCCTCCATGACCACCATC
CTCATGGGCTACAATCTCGCGCTGATGAGCGGCGCGCAGCTGTTCGTCCGGGAGGACGTG
GGGCTGAGCGACGCGCAGATCGAGGTGCTCGCCGGGTCGATGAACGTGTTCATGCTCGTG
TCCATCCTCGCCGCCGGCTGGGCGGCCGACGTGCTCGGCCGCCGCGGCACGCTCGTGCTG
GCGAACGCGTACCTCATGGCCGGCGCGCTCGCCATGTCGCTCGGCGCCACCTACGCCGCG
CTCATGGCCGCGCGCTTCGTCACCAGCGTCGGCGTCGGCTTCTCCCTCGTCGTCGCGCCC
GTGTACAACGCCGAGATCTCGCCGGCCTCCGCCCGCGGCGTCCTCTCCTCGCTGCTCGAT
ATGTTCGTCAACGTCGGGATCTTGCTGAGCTACGTGTCGAACTACGCGTTGGCCGGATTG
CCGGTGCACGTCGGGTGGCGCGTCATGTACGGCATCGGCGTGCTCCCGCCGGTGTTCCTC
GCCGCGGGCGTGCTCGCCATGCCGGAGTCGCCGCGCTGGCTCGCCATGCGCGGTCGCCAC
GCCGACGCGCGCGCGGTGCTCGTGCGCACCTCCGACTCCGTCGAGGAGGCCGAGCTCCGC
CTCGAGGAGATCAAGCGAGCCGTCGAGGCGCCGCAGGAGTCCGCCGGCGTCGGCGTGTGG
CGGGAGCTCCTCCTGCGGCCGTCGGCGATGGTCCGGCGGATCGTCACCTGCGTTGTCGGC
CTCCACTTCTTCCAGCAAGCGTCCGGCATCGACGCCATCGTGCTGTACAGCCCGCTGGTG
TTCAAGAAGGCAGGCATGGCGTCGAACACCTCCGTCCTGGGCGCCACGGTCGCCGTCGGC
GTCGTCAAGACGTGCTTCATCCTCGTCGCCACGCTCCTCTCCGACCGCCTCGGCCGCCGC
CCGCTCCTGCTCGCCAGCACCGGCGGCGTGGCCGTCACCCTCACCTCGCTCGCCCTCGCC
CTCCGCGTCGCGTCGCCGTCCACGGCGAGCGCCGCGGCGTGCGTGGCGTCCGTGATGGCG
TTCGTGGCGGCGTTCTCCGTCGGGTTCGGGCCGATGACGGCGACGTACACCGCCGAGATC
ATGCCGCTGCGGCTGCGCGCGCAGGGCGCGAGCCTCGGCATGGCCGTGAACCGGCTGACG
TGCGGCGTGGTGAGCATGACTTTCATCTCGCTCGCCGGCGGGATCACCATGGCCGGGTGC
TTCTTCCTCTACGCCGGCGTGGCGGCGGTGGCGTGCGTGTTCGTGTACGTGCGGCTGCCG
GAGACGAGGGGGCGGAGCTTGGAGGACATGGACGTGCTCTTCGCCAAGTGA

Peptide Sequence

PEP ID

Os11t0637200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:25165988:25167744:-1 gene:Os11g0637200 transcript:Os11t0637200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorbitol transporter. (Os11t0637200-01)
Sequence

MAHAGDATAPLLSSPAKPGDEPRRNMYAFGCATLASMTTILMGYNLALMSGAQLFVREDV
GLSDAQIEVLAGSMNVFMLVSILAAGWAADVLGRRGTLVLANAYLMAGALAMSLGATYAA
LMAARFVTSVGVGFSLVVAPVYNAEISPASARGVLSSLLDMFVNVGILLSYVSNYALAGL
PVHVGWRVMYGIGVLPPVFLAAGVLAMPESPRWLAMRGRHADARAVLVRTSDSVEEAELR
LEEIKRAVEAPQESAGVGVWRELLLRPSAMVRRIVTCVVGLHFFQQASGIDAIVLYSPLV
FKKAGMASNTSVLGATVAVGVVKTCFILVATLLSDRLGRRPLLLASTGGVAVTLTSLALA
LRVASPSTASAAACVASVMAFVAAFSVGFGPMTATYTAEIMPLRLRAQGASLGMAVNRLT
CGVVSMTFISLAGGITMAGCFFLYAGVAAVACVFVYVRLPETRGRSLEDMDVLFAK

Transcript Sequence

Transcript ID

Os11t0637200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:25165988:25167744:-1 gene:Os11g0637200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sorbitol transporter. (Os11t0637200-01)
Sequence

CACAACTCGACCGTGTTCGCCGAGAAACCAAGCCACGGTCACCATGGCGCACGCCGGCGA
TGCCACGGCGCCGCTCCTCTCCTCGCCGGCCAAGCCCGGCGACGAGCCCCGCCGCAACAT
GTACGCCTTCGGCTGCGCCACCCTCGCCTCCATGACCACCATCCTCATGGGCTACAATCT
CGCGCTGATGAGCGGCGCGCAGCTGTTCGTCCGGGAGGACGTGGGGCTGAGCGACGCGCA
GATCGAGGTGCTCGCCGGGTCGATGAACGTGTTCATGCTCGTGTCCATCCTCGCCGCCGG
CTGGGCGGCCGACGTGCTCGGCCGCCGCGGCACGCTCGTGCTGGCGAACGCGTACCTCAT
GGCCGGCGCGCTCGCCATGTCGCTCGGCGCCACCTACGCCGCGCTCATGGCCGCGCGCTT
CGTCACCAGCGTCGGCGTCGGCTTCTCCCTCGTCGTCGCGCCCGTGTACAACGCCGAGAT
CTCGCCGGCCTCCGCCCGCGGCGTCCTCTCCTCGCTGCTCGATATGTTCGTCAACGTCGG
GATCTTGCTGAGCTACGTGTCGAACTACGCGTTGGCCGGATTGCCGGTGCACGTCGGGTG
GCGCGTCATGTACGGCATCGGCGTGCTCCCGCCGGTGTTCCTCGCCGCGGGCGTGCTCGC
CATGCCGGAGTCGCCGCGCTGGCTCGCCATGCGCGGTCGCCACGCCGACGCGCGCGCGGT
GCTCGTGCGCACCTCCGACTCCGTCGAGGAGGCCGAGCTCCGCCTCGAGGAGATCAAGCG
AGCCGTCGAGGCGCCGCAGGAGTCCGCCGGCGTCGGCGTGTGGCGGGAGCTCCTCCTGCG
GCCGTCGGCGATGGTCCGGCGGATCGTCACCTGCGTTGTCGGCCTCCACTTCTTCCAGCA
AGCGTCCGGCATCGACGCCATCGTGCTGTACAGCCCGCTGGTGTTCAAGAAGGCAGGCAT
GGCGTCGAACACCTCCGTCCTGGGCGCCACGGTCGCCGTCGGCGTCGTCAAGACGTGCTT
CATCCTCGTCGCCACGCTCCTCTCCGACCGCCTCGGCCGCCGCCCGCTCCTGCTCGCCAG
CACCGGCGGCGTGGCCGTCACCCTCACCTCGCTCGCCCTCGCCCTCCGCGTCGCGTCGCC
GTCCACGGCGAGCGCCGCGGCGTGCGTGGCGTCCGTGATGGCGTTCGTGGCGGCGTTCTC
CGTCGGGTTCGGGCCGATGACGGCGACGTACACCGCCGAGATCATGCCGCTGCGGCTGCG
CGCGCAGGGCGCGAGCCTCGGCATGGCCGTGAACCGGCTGACGTGCGGCGTGGTGAGCAT
GACTTTCATCTCGCTCGCCGGCGGGATCACCATGGCCGGGTGCTTCTTCCTCTACGCCGG
CGTGGCGGCGGTGGCGTGCGTGTTCGTGTACGTGCGGCTGCCGGAGACGAGGGGGCGGAG
CTTGGAGGACATGGACGTGCTCTTCGCCAAGTGATCAACGTACTATTTCATTACTACATT
TTTTATGGAAGAGTATGAAGAATTTATTTATTCTTAACTTTGATTTTCTCCATCCAAGAA
GGGACGATGTAACATTTAGCAACCAAAATGCATTGGAGGTGTTATCAGTT