Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0634700-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:24980227:24984249:1 gene:Os11g0634700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 132, ROOT HAIR DEFECTIVE-SIX LIKE 7 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os11t0634700-00)
Sequence	ATGAGGGGCACACAATCAACGGTAGAACTAACCTATTTCGTCGACTGCTTAACGACGACG AGCTTGCAGACGCCATGGCTGCTCGCCGCCTCCAGCCTCAACCTCGCCGACTCCGGCCGC AACCAACCCGTCTCCGACCGCTACCTCCTCGTTCCGCACTTCGCCGCCGCACACCGTCCC CTCGTCGCCTCACCCGCTTCAGCCACTAACCCTAGTGCTCACAGAAACAATTCCAAGAGA TCACACATTACAACTCTTTTCAAAAGATCACAAATTAGAGCTTGGAAGTTTCAGATCAAT AGGATGGATGCAAGGTGTGCAAACATCTGGAGCTCTGCTGATGCAAGGAGTGAGGAATCT GAGATGATTGATCAACTAAAGTCCATGTTCTGGAGCAGCACTGATGCTGAAATCAACTTT TATTCTCCTGACAGTAGTGTAAATTCTTGTGTCACAACTAGCACAATGCCTAGCAGCTTG TTTCTTCCTCTGATGGATGATGAGGGATTTGGCACAGTGCAATTGATGGTTAGCACTGGC ATGGATATGTGTTCTGATCATCAGCATCAGGTCATCACTGGGAACAAGAGGATGTTCCCC ATGGATGAGCACTTTGAGCAGCAGCAGAAGAAGCCGAAGAAGAAAACCCGAACTTCTCGC TCGGTATCAAGTAGTTCAACCATTACTGACTATGAGACTAGCTCTGAACTTGTCAATCCT AGCTGTTCCTCCGGGAGCAGCGTCGGAGAGGATTCAATTGCTGCAACTGATGGATCTGTA GTGCTGAAACAAAGTGACAATTCAAGAGGCCATAAGCAGTGCTCCAAGGATACACAAAGC CTCTATGCTAAGAGGAGAAGGGAAAGGATTAATGAGAGACTGAGAATACTTCAGCAGCTT GTTCCCAATGGCACTAAAGTTGACATCAGCACAATGCTGGAGGAAGCAGTTCAGTATGTC AAGTTTTTGCAGTTGCAAATAAAGCTATTGAGCTCTGACGACACATGGATGTTTGCGCCC CTAGCCTATAATGGCATGAACATGGATCTCGGTCATACTCTTGCTGAAAACCAAGAATGA

Peptide Sequence

PEP ID	Os11t0634700-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:24980227:24984249:1 gene:Os11g0634700 transcript:Os11t0634700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 132, ROOT HAIR DEFECTIVE-SIX LIKE 7 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os11t0634700-00)
Sequence	MRGTQSTVELTYFVDCLTTTSLQTPWLLAASSLNLADSGRNQPVSDRYLLVPHFAAAHRP LVASPASATNPSAHRNNSKRSHITTLFKRSQIRAWKFQINRMDARCANIWSSADARSEES EMIDQLKSMFWSSTDAEINFYSPDSSVNSCVTTSTMPSSLFLPLMDDEGFGTVQLMVSTG MDMCSDHQHQVITGNKRMFPMDEHFEQQQKKPKKKTRTSRSVSSSSTITDYETSSELVNP SCSSGSSVGEDSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQL VPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDTWMFAPLAYNGMNMDLGHTLAENQE

Transcript Sequence

Transcript ID	Os11t0634700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:24980227:24984249:1 gene:Os11g0634700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 132, ROOT HAIR DEFECTIVE-SIX LIKE 7 description:Similar to Helix-loop-helix DNA-binding domain containing protein. (Os11t0634700-00)
Sequence	ATGAGGGGCACACAATCAACGGTAGAACTAACCTATTTCGTCGACTGCTTAACGACGACG AGCTTGCAGACGCCATGGCTGCTCGCCGCCTCCAGCCTCAACCTCGCCGACTCCGGCCGC AACCAACCCGTCTCCGACCGCTACCTCCTCGTTCCGCACTTCGCCGCCGCACACCGTCCC CTCGTCGCCTCACCCGCTTCAGCCACTAACCCTAGTGCTCACAGAAACAATTCCAAGAGA TCACACATTACAACTCTTTTCAAAAGATCACAAATTAGAGCTTGGAAGTTTCAGATCAAT AGGATGGATGCAAGGTGTGCAAACATCTGGAGCTCTGCTGATGCAAGGAGTGAGGAATCT GAGATGATTGATCAACTAAAGTCCATGTTCTGGAGCAGCACTGATGCTGAAATCAACTTT TATTCTCCTGACAGTAGTGTAAATTCTTGTGTCACAACTAGCACAATGCCTAGCAGCTTG TTTCTTCCTCTGATGGATGATGAGGGATTTGGCACAGTGCAATTGATGGTTAGCACTGGC ATGGATATGTGTTCTGATCATCAGCATCAGGTCATCACTGGGAACAAGAGGATGTTCCCC ATGGATGAGCACTTTGAGCAGCAGCAGAAGAAGCCGAAGAAGAAAACCCGAACTTCTCGC TCGGTATCAAGTAGTTCAACCATTACTGACTATGAGACTAGCTCTGAACTTGTCAATCCT AGCTGTTCCTCCGGGAGCAGCGTCGGAGAGGATTCAATTGCTGCAACTGATGGATCTGTA GTGCTGAAACAAAGTGACAATTCAAGAGGCCATAAGCAGTGCTCCAAGGATACACAAAGC CTCTATGCTAAGAGGAGAAGGGAAAGGATTAATGAGAGACTGAGAATACTTCAGCAGCTT GTTCCCAATGGCACTAAAGTTGACATCAGCACAATGCTGGAGGAAGCAGTTCAGTATGTC AAGTTTTTGCAGTTGCAAATAAAGCTATTGAGCTCTGACGACACATGGATGTTTGCGCCC CTAGCCTATAATGGCATGAACATGGATCTCGGTCATACTCTTGCTGAAAACCAAGAATGA