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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0629400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:24651999:24653182:-1 gene:Os11g0629400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nitrilase associated protein-like. (Os11t0629400-01)
Sequence

ATGGGGAGAGGAAGAGGGGTGAGCAGCGGGGGAGGGCAGAGCTCGCTGGGCTACCTCTTC
GGCGGCGGCGAGACGGCTCCCGCGGCGAAGGCGAAGCCGGCTGCAGCGGCGGAGAAGGAG
ACTACGCCGGCGCCAGTGAAGAAGGCGGCGGTGGCGGCGGCGGCGTCGCCGTCGGCAGCG
GAGAAGATGAAGGAGATCCCCGCGGGGATACAAAGCACCCAGGCCAACAACTACTTCCGG
GCGCAGGGCCAGAATTGCGGCAACTTCCTCACGGATCGGCCGTCAACCAAGGTGCACGCT
GCTCCGGGCGGCGGCTCGTCGCTCGGCTACCTCTTCGGCGGCAAGTGA

Peptide Sequence

PEP ID

Os11t0629400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:24651999:24653182:-1 gene:Os11g0629400 transcript:Os11t0629400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nitrilase associated protein-like. (Os11t0629400-01)
Sequence

MGRGRGVSSGGGQSSLGYLFGGGETAPAAKAKPAAAAEKETTPAPVKKAAVAAAASPSAA
EKMKEIPAGIQSTQANNYFRAQGQNCGNFLTDRPSTKVHAAPGGGSSLGYLFGGK

Transcript Sequence

Transcript ID

Os11t0629400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:24651999:24653182:-1 gene:Os11g0629400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nitrilase associated protein-like. (Os11t0629400-01)
Sequence

CAGAGCAAGCTCTTCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCATCATCGCCG
TCGAAGCGTAGAGGGAGTAAGGGGAGGATGGGGAGAGGAAGAGGGGTGAGCAGCGGGGGA
GGGCAGAGCTCGCTGGGCTACCTCTTCGGCGGCGGCGAGACGGCTCCCGCGGCGAAGGCG
AAGCCGGCTGCAGCGGCGGAGAAGGAGACTACGCCGGCGCCAGTGAAGAAGGCGGCGGTG
GCGGCGGCGGCGTCGCCGTCGGCAGCGGAGAAGATGAAGGAGATCCCCGCGGGGATACAA
AGCACCCAGGCCAACAACTACTTCCGGGCGCAGGGCCAGAATTGCGGCAACTTCCTCACG
GATCGGCCGTCAACCAAGGTGCACGCTGCTCCGGGCGGCGGCTCGTCGCTCGGCTACCTC
TTCGGCGGCAAGTGATGCGAAAAAAAAAGAAGAAAGAATCCTCTGCTCGAGAAATTTCTC
TCTAGCAGATAACGTGATTATTTTTAAACCTGCTTTTGTGTAGATTGCCTGTGTATTGTG
TGTTGTGATGTGTTCTTGTGTGATTTGCAGCTACTTAAAAAAAAAACTTAACTAGTTCTG
CAGGCTCTGATGGCTGTATCAGCCACTGGCATAAAATGCTCAGATGGTGTTAATTCTTCG
AGTTAGTATGCTTGGAATGCAGTTGTAACTTGTAAACATTTACATGACCATGTCTCTGTT
TCCTTC