Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0629200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:24642531:24646800:1 gene:Os11g0629200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein. (Os11t0629200-01)
Sequence	ATGAATTACATCATCGGAGCATTCAAGGCGCCCTGCGACGTCTTCATCACCTTCGCCGAT GAGAGGAGCCGGAAGCAGGTGGCGATCAAGAAGGATAACGGGAAGACGTTGATGGTGCCG GCCTTCCAGAGCCTGGAGACTATTGCAGGAGAGGTGTCGGTAGCGCCCGTTCCAGGTAAA AGGGTGGAGCACCAAGGTGTCAAGATTGAGCTGCTGGGTCAGATAGAGCTGTACCATGAG AGAGGTCACTTCTATGACTTCACTTCGTTAGTGCGAGAGTTAGAGGTTGCTGGTGAAATC TATGAAAGGAAGACTTATCCATTTGAATTCTCTACTGTTGAGATGCCTTATGAGTCGTAT AACGGAACAAATGTCAGATTGAGGTACATCCTGAAAGTTACAATTGGCAGACCATATGCT ACTAGTGTTGTGGAATGTCGAGATTTCTGTGTAAGGAATTACACTCCTCTTCCTTCAATT AACAATAGCATCAAGATGGAAGTTGGAATTGAAGATTGTTTGCATATTGAATTTGAGTAC AGCAAAAGCAAGTACCATCTCAAGGATGTGATCGTGGGAAAAATCTATTTTCTTCTAGTC AGAATAAAGATAAAGAACATGGAGCTTGAGATTCGTCGGCGGGAATCAACAGGATCTGGG CCTGGCACATATATTGAGACTGAGACACTTGCAAAGTTTGAGTTGATGGATGGCGCTCCC GTAAGAGGTGAGTCTATTCCGGTAAGACTCTTCTTGACACCATATGAGTTGACCCCGACT TACCGCAACATAAACAACAAGTTCAATGTCAAGTACTACCTGAACCTGGTTCTTGTTGAC GAGGAAGACCGGAGGTACTTCAAGCAGCAAGAGATCACAATGTACCGCCTTCAAGAAACT CCGCAATCTTCATAA

Peptide Sequence

PEP ID	Os11t0629200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:24642531:24646800:1 gene:Os11g0629200 transcript:Os11t0629200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein. (Os11t0629200-01)
Sequence	MNYIIGAFKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGEVSVAPVPGK RVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYPFEFSTVEMPYESY NGTNVRLRYILKVTIGRPYATSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEY SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPGTYIETETLAKFELMDGAP VRGESIPVRLFLTPYELTPTYRNINNKFNVKYYLNLVLVDEEDRRYFKQQEITMYRLQET PQSS

Transcript Sequence

Transcript ID	Os11t0629200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:24642531:24646800:1 gene:Os11g0629200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein. (Os11t0629200-01)
Sequence	CCCGATCCCCCTTCACACGCGGCGGTTGACGTCTCCGACGCCGGCGATCTCCTCCGCCCC CTCCCCTCCCCCGCCGCCGCCGCCGACCCTCCTCAGCTCGGCCGCCACCTCCTCCGCCAG AGGGAGAGCCCCCTCCACCTCGGCTCCTGCTCCTCCAACGCCGCCATGAATTACATCATC GGAGCATTCAAGGCGCCCTGCGACGTCTTCATCACCTTCGCCGATGAGAGGAGCCGGAAG CAGGTGGCGATCAAGAAGGATAACGGGAAGACGTTGATGGTGCCGGCCTTCCAGAGCCTG GAGACTATTGCAGGAGAGGTGTCGGTAGCGCCCGTTCCAGGTAAAAGGGTGGAGCACCAA GGTGTCAAGATTGAGCTGCTGGGTCAGATAGAGCTGTACCATGAGAGAGGTCACTTCTAT GACTTCACTTCGTTAGTGCGAGAGTTAGAGGTTGCTGGTGAAATCTATGAAAGGAAGACT TATCCATTTGAATTCTCTACTGTTGAGATGCCTTATGAGTCGTATAACGGAACAAATGTC AGATTGAGGTACATCCTGAAAGTTACAATTGGCAGACCATATGCTACTAGTGTTGTGGAA TGTCGAGATTTCTGTGTAAGGAATTACACTCCTCTTCCTTCAATTAACAATAGCATCAAG ATGGAAGTTGGAATTGAAGATTGTTTGCATATTGAATTTGAGTACAGCAAAAGCAAGTAC CATCTCAAGGATGTGATCGTGGGAAAAATCTATTTTCTTCTAGTCAGAATAAAGATAAAG AACATGGAGCTTGAGATTCGTCGGCGGGAATCAACAGGATCTGGGCCTGGCACATATATT GAGACTGAGACACTTGCAAAGTTTGAGTTGATGGATGGCGCTCCCGTAAGAGGTGAGTCT ATTCCGGTAAGACTCTTCTTGACACCATATGAGTTGACCCCGACTTACCGCAACATAAAC AACAAGTTCAATGTCAAGTACTACCTGAACCTGGTTCTTGTTGACGAGGAAGACCGGAGG TACTTCAAGCAGCAAGAGATCACAATGTACCGCCTTCAAGAAACTCCGCAATCTTCATAA ACTCCTGTTGCCTTGACTTGGTAACGACCAGAAAAACTTGGGTCTGTCTGGCATAGGAGA GCACCGGAGTAGCAACTTAGCATGATGCGCCTTCCTGTATATAACTCTCCAGAGGAGCGA TGCCCTTTGTGATGTACCGTGTACTGTTTTTGCCTATGCTCTTTTCCCCCCCATTTTCTC CTTCATTCTGATCAGGAAACAAACCATGACAACGCTGGCATTGTTGCCCTTTTCGCCTTG TTCATTTGAGCTTTCTTGTTAGACTTTGTGGGATAACCATATATTTGTTGATATTTTGCT TCATTGTTTTACCCTTT