Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0629100-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:24638208:24639893:1 gene:Os11g0629100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0629100-00)
Sequence	ATGTTTTCGTGTGAATCTGTAATAGCTCCACGATTGCTTGACAGTGTTGTACAATGTTTT CAAGAAAGGCCTGACCTGGCTATTAATATCTTTATTTTTTTATGGGTGATAGCTCCACTG GTAGAATTGATGCTCTCTTACCCCATCACCGTCAAAAAGAATAATATTTACCCTCTCACT AACATAATGCTGCTGTCAACACAGATCTCCACGCTAATCCTTAAGGTTGACCTCGCTTGC CACAAGTGCTACAATAAAATTCGCAAGATTCTCTGCAATCTCCAAGACCAGGAGAGGATC ACGACGATCTCGTACGACACCAAGAACAACATCGTCGTCATCGCCGGCACGTTCGATCCT CAGAGGCTTTGCTGCAGGATCAGATGCAAGGGAGGCAAGATCATCAAGGACATCCACATC GTCGACGCCGCCGGCGGCGGCAAGCCGGCGAAAATGCCGGACTCGCCGCCGCCATCACTA CCGCCGCCGGTGAACACCGGCAAGAAGAAGTGGAAGAAGGACAAGCGCAAGGAAATTCCG CCGCCGCCGCCGCTGGCTGAGACGCCACCGCCGATGAATGAGCGACCGCCGACGCCGCCG CCAGTACAGCCGCCTCCTGACAGGGAGACATCGGCGATGGTGCCGGCGATCGTCGAGGAG GAGAAGCCGAGGGATAGGGTGGCCGAGCTGGAGCCGCCGTCACCGCACAAGGAGATGCCG CTGCCGCAGCCGACGACGATGGAGATGCCACCGCCGCCGGTCACGTGCACGCCGGTGGTG GAGAAGCCGAGGCCGCCGCCGTGCGCGAGGCCGTTCTACCCGGTGGACATGGCGACGCCG ACGATGGTGGAGATCCCGTCGTGGCCGGCGGCGCCCGCGCCGCCGTCGTGCTGCGCGCCG CCGCCGTGCTACCAGGGGTGCTACGAGGGGTGCAGGTGCGGCGGCTGCGGCCGCGTGTAC GGCTACTCCGTACCCAGCGCCAGGCCGCCGCCGCTGCTGCCGCCGCCGTGCTACTCCGGC GGCGGCGGCGGCGGCTACACGCCGTACTGCGGCGGGTACAGCGGCTGCCGCCTCGTCAAC GAGGAGGACCCGACGGCTTGCGTCATCATGTGA

Peptide Sequence

PEP ID	Os11t0629100-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:24638208:24639893:1 gene:Os11g0629100 transcript:Os11t0629100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0629100-00)
Sequence	MFSCESVIAPRLLDSVVQCFQERPDLAINIFIFLWVIAPLVELMLSYPITVKKNNIYPLT NIMLLSTQISTLILKVDLACHKCYNKIRKILCNLQDQERITTISYDTKNNIVVIAGTFDP QRLCCRIRCKGGKIIKDIHIVDAAGGGKPAKMPDSPPPSLPPPVNTGKKKWKKDKRKEIP PPPPLAETPPPMNERPPTPPPVQPPPDRETSAMVPAIVEEEKPRDRVAELEPPSPHKEMP LPQPTTMEMPPPPVTCTPVVEKPRPPPCARPFYPVDMATPTMVEIPSWPAAPAPPSCCAP PPCYQGCYEGCRCGGCGRVYGYSVPSARPPPLLPPPCYSGGGGGGYTPYCGGYSGCRLVN EEDPTACVIM

Transcript Sequence

Transcript ID	Os11t0629100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:24638208:24639893:1 gene:Os11g0629100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0629100-00)
Sequence	ATGTTTTCGTGTGAATCTGTAATAGCTCCACGATTGCTTGACAGTGTTGTACAATGTTTT CAAGAAAGGCCTGACCTGGCTATTAATATCTTTATTTTTTTATGGGTGATAGCTCCACTG GTAGAATTGATGCTCTCTTACCCCATCACCGTCAAAAAGAATAATATTTACCCTCTCACT AACATAATGCTGCTGTCAACACAGATCTCCACGCTAATCCTTAAGGTTGACCTCGCTTGC CACAAGTGCTACAATAAAATTCGCAAGATTCTCTGCAATCTCCAAGACCAGGAGAGGATC ACGACGATCTCGTACGACACCAAGAACAACATCGTCGTCATCGCCGGCACGTTCGATCCT CAGAGGCTTTGCTGCAGGATCAGATGCAAGGGAGGCAAGATCATCAAGGACATCCACATC GTCGACGCCGCCGGCGGCGGCAAGCCGGCGAAAATGCCGGACTCGCCGCCGCCATCACTA CCGCCGCCGGTGAACACCGGCAAGAAGAAGTGGAAGAAGGACAAGCGCAAGGAAATTCCG CCGCCGCCGCCGCTGGCTGAGACGCCACCGCCGATGAATGAGCGACCGCCGACGCCGCCG CCAGTACAGCCGCCTCCTGACAGGGAGACATCGGCGATGGTGCCGGCGATCGTCGAGGAG GAGAAGCCGAGGGATAGGGTGGCCGAGCTGGAGCCGCCGTCACCGCACAAGGAGATGCCG CTGCCGCAGCCGACGACGATGGAGATGCCACCGCCGCCGGTCACGTGCACGCCGGTGGTG GAGAAGCCGAGGCCGCCGCCGTGCGCGAGGCCGTTCTACCCGGTGGACATGGCGACGCCG ACGATGGTGGAGATCCCGTCGTGGCCGGCGGCGCCCGCGCCGCCGTCGTGCTGCGCGCCG CCGCCGTGCTACCAGGGGTGCTACGAGGGGTGCAGGTGCGGCGGCTGCGGCCGCGTGTAC GGCTACTCCGTACCCAGCGCCAGGCCGCCGCCGCTGCTGCCGCCGCCGTGCTACTCCGGC GGCGGCGGCGGCGGCTACACGCCGTACTGCGGCGGGTACAGCGGCTGCCGCCTCGTCAAC GAGGAGGACCCGACGGCTTGCGTCATCATGTGATCTCGCTACGTCATCATTTCT