Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0628000-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:24616115:24619613:1 gene:Os11g0628000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, catalytic domain domain containing protein. (Os11t0628000-00)
Sequence	ATGATATCTCCCCAGCTTCTCCTACTTCTGGCCTTCTTCCATTTCCTGAGCCCATACCTT CCGCTATCTGCTTTTGCGCAATTTCGCAATGATTCCAGTGCTGATCGACTAGCCCTCCTC TGCCTCAAGTCCCAGCTCCTTGACCCCTCTGGAGCGTTAACCTCATGGGGAAATGAATCC CTTTCAATCTGCAATTGGAACGGAGTTACATGCAGCAAGCGCGATCCATCTCGAGTTGTT GCTTTAGACCTCGAGTCACAGAATATTACAGGCAAAATATTTCCTTGTGTTGCAAACCTC AGTTTCATCTCTAGAATTCACATGCCCGGTAACCATCTCAATGGCCAAATTTCTCCTGAG ATTGGCCGCTTAACCCACCTTACATTCCTTAATCTCAGCATGAATTCCCTTAGTGGTGAG ATACCGGAGACTATATCATCATGTTCCCATCTCGAGATTGTCATCCTGCATAGAAACTCC CTTTCAGGTGAGATCCCTCGAAGTCTTGCTCAGTGTTTATTTCTTCAGCAAATTATTCTA AGCAATAACCATATTCAAGGAAGCATCCCTCCAGAGATTGGTCTCCTTTCCAACCTTTCT GCACTATTTATTCGTAACAATCAACTCACTGGCACCATTCCTCAACTATTAGGGAGTAGC AGATCACTTGTCTGGGTGAATCTCCAGAATAACAGCTTAACTGGGGAGATACCCAATTCC CTGTTCAATTGCACTACCATTTCTTACATAGATCTCTCATATAATGGTCTATCTGGGTCT ATTCCTCCATTCTCACAAACATCTTCATCGCTACGATACCTTAGCTTAACTGAAAACCAC CTCTCTGGTGTGATACCTACCTTAGTTGATAACCTTCCATTGTTGTCCACACTGATGCTT GCTAGAAACAACTTGGAAGGAACAATTCCAGATAGCCTAAGTAAACTTTCTAGTTTACAA ACACTAGACCTAAGTTATAATAATTTGTCAGGTAATGTTCCGCTAGGACTATACGCAATT TCAAATCTTACCTATCTTAACTTTGGTGCCAACCAATTTGTAGGGAGAATTCCCACCAAT ATTGGCTATACCCTTCCAGGACTCACAAGTATAATTCTAGAAGGGAACCAGTTTGAGGGA CCGATTCCTGCTTCGTTGGCCAATGCCTTGAATCTCCAAAATATATATTTTCGAAGGAAC TCATTCGATGGTGTTATTCCTCCATTAGGATCCCTGTCCATGTTGACTTATTTAGATCTA GGTGACAATAAGCTTGAGGCTGGAGATTGGACTTTCATGTCCTCACTAACAAACTGCACC CAACTACAAAATTTGTGGTTGGACAGAAACAATCTCCAAGGAATAATACCATCATCTATT TCCAACCTTTCTGAAAGCCTAAAGGTATTGATCCTAATACAGAACAAATTGACTGGTAGC ATACCTTCCGAGATAGAAAAACTCAGTAGCCTCAGTGTCCTTCAAATGGATAGAAATTTT CTTTCTGGCCAAATTCCTGACACACTAGTAAATCTTCAAAACTTGTCAATCCTAAGTTTG TCCAACAACAAGCTTTCTGGAGAGATCCCACGATCAATTGGAAAATTAGAGCAGCTTACT AAACTTTATCTTCAGGATAATGATTTAACAGGGAAAATACCTTCTAGTTTAGCCAGATGC ACAAATTTGGCAAAACTAAACCTTTCTAGAAATTACCTTAGTGGAAGCATTCCATCAAAA CTATTTTCCATTTCGACACTTTCAGAAGGTTTAGACATATCCTATAATCAACTAACCGGA CATATACCACTGGAGATTGGTAGGTTGATTAATCTTAATTCACTTAACATCTCACACAAC CAATTATCTGGTGAGATTCCCTCTTCTCTTGGGCAGTGCCTTCTGTTGGAATCCATCAGC TTGGAGTCAAATTTTCTACAAGGAAGCATCCCAGAATCTCTTATAAACTTAAGAGGCATC ACGGAGATGGATCTTTCCCAAAACAACTTATCTGGTGAAATCCCAATATATTTTGAGACT TTTGGATCTCTACACACTCTCAATCTGTCCTTCAATAACCTTGAGGGACCAGTCCCTAAA GGAGGTGTGTTTGCAAATTTAAACGATGTGTTTATGCAAGGAAATAAAAAGTTGTGTGGA GGTTCTCCAATGCTACATTTACCACTTTGCAAGGATTTGTCATCCAAAAGGAAAAGGACA CCTTATATTCTTGGTGTAGTCATTCCAATCACTACCATTGTTATAGTCACCTTGGTATGT GTTGCCATCATTCTTATGAAGAAGAGAACTGAACCAAAGGGAACCATTATCAACCATTCA TTCAGGCATTTTGATAAGTTATCGTACAATGATCTGTACAAAGCAACTGATGGTTTCTCT TCAACAAATCTTGTTGGTTCGGGAACATTTGGATTCGTATATAAAGGTCAGTTGAAGTTT GAAGCACGCAATGTTGCAATTAAAGTTTTTAGACTTGACCGAAATGGAGCACCAAACAAC TTTTTTGCTGAATGTGAGGCATTGAAAAACATTCGCCACCGGAATCTTATAAGAGTCATT AGCCTATGCTCAACATTTGATCCATCAGGAAATGAATTCAAAGCACTTATTCTTGAGTTT AGGAGCAATGGGAACCTCGAAAGCTGGATTCATCCAAAAGTGTACAGTCAAAGCCCTCAA AAACGGTTGAGTTTGGGTTCAAGAATTAGAATAGCTGTAGATATTGCAGCTGCATTAGAC TATCTTCATAATCGATGCACTCCTTCTTTGGTTCATTGTGATCTGAAACCAAGCAATGTC CTTTTGGATGATGAAATGGTTGCATGTCTTAGCGACTTTGGACTTGCAAAGTTTCTTCAC AATGACATTATAAGCCTGGAAAATTCATCAAGCTCTGCTGTACTGAGAGGATCAATTGGA TACATTGCTCCAGAGTATGGCTTGGGGTGCAAGGTCTCAACTGAGGGTGATGTATACAGT TTTGGAATAATTGTCCTAGAGATGATCACAGGAAAGCGCCCAACCGATGAGATCTTTAAG GATGGCATGAACCTTCACAGCTTAGTGGAGTCAGCATTTCCACATCAGATGAATGACATT TTAGAACCTACTCTCACCACATATCATGAAGGTGAAGAACCAAATCATGATGTGCTTGAA ATACAAACGTGTGCCATACAGCTGGCTAAGCTTGCGCTGCTGTGCACTGAGCCATCACCA AAAGATCGACCAACAATAGATGATGTTTACGCTGAGATCATTTCCATCAACGACAAGTAT TGTGCACTGATCAACTGA

Peptide Sequence

PEP ID	Os11t0628000-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:24616115:24619613:1 gene:Os11g0628000 transcript:Os11t0628000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, catalytic domain domain containing protein. (Os11t0628000-00)
Sequence	MISPQLLLLLAFFHFLSPYLPLSAFAQFRNDSSADRLALLCLKSQLLDPSGALTSWGNES LSICNWNGVTCSKRDPSRVVALDLESQNITGKIFPCVANLSFISRIHMPGNHLNGQISPE IGRLTHLTFLNLSMNSLSGEIPETISSCSHLEIVILHRNSLSGEIPRSLAQCLFLQQIIL SNNHIQGSIPPEIGLLSNLSALFIRNNQLTGTIPQLLGSSRSLVWVNLQNNSLTGEIPNS LFNCTTISYIDLSYNGLSGSIPPFSQTSSSLRYLSLTENHLSGVIPTLVDNLPLLSTLML ARNNLEGTIPDSLSKLSSLQTLDLSYNNLSGNVPLGLYAISNLTYLNFGANQFVGRIPTN IGYTLPGLTSIILEGNQFEGPIPASLANALNLQNIYFRRNSFDGVIPPLGSLSMLTYLDL GDNKLEAGDWTFMSSLTNCTQLQNLWLDRNNLQGIIPSSISNLSESLKVLILIQNKLTGS IPSEIEKLSSLSVLQMDRNFLSGQIPDTLVNLQNLSILSLSNNKLSGEIPRSIGKLEQLT KLYLQDNDLTGKIPSSLARCTNLAKLNLSRNYLSGSIPSKLFSISTLSEGLDISYNQLTG HIPLEIGRLINLNSLNISHNQLSGEIPSSLGQCLLLESISLESNFLQGSIPESLINLRGI TEMDLSQNNLSGEIPIYFETFGSLHTLNLSFNNLEGPVPKGGVFANLNDVFMQGNKKLCG GSPMLHLPLCKDLSSKRKRTPYILGVVIPITTIVIVTLVCVAIILMKKRTEPKGTIINHS FRHFDKLSYNDLYKATDGFSSTNLVGSGTFGFVYKGQLKFEARNVAIKVFRLDRNGAPNN FFAECEALKNIRHRNLIRVISLCSTFDPSGNEFKALILEFRSNGNLESWIHPKVYSQSPQ KRLSLGSRIRIAVDIAAALDYLHNRCTPSLVHCDLKPSNVLLDDEMVACLSDFGLAKFLH NDIISLENSSSSAVLRGSIGYIAPEYGLGCKVSTEGDVYSFGIIVLEMITGKRPTDEIFK DGMNLHSLVESAFPHQMNDILEPTLTTYHEGEEPNHDVLEIQTCAIQLAKLALLCTEPSP KDRPTIDDVYAEIISINDKYCALIN

Transcript Sequence

Transcript ID	Os11t0628000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:24616115:24619613:1 gene:Os11g0628000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, catalytic domain domain containing protein. (Os11t0628000-00)
Sequence	ATGATATCTCCCCAGCTTCTCCTACTTCTGGCCTTCTTCCATTTCCTGAGCCCATACCTT CCGCTATCTGCTTTTGCGCAATTTCGCAATGATTCCAGTGCTGATCGACTAGCCCTCCTC TGCCTCAAGTCCCAGCTCCTTGACCCCTCTGGAGCGTTAACCTCATGGGGAAATGAATCC CTTTCAATCTGCAATTGGAACGGAGTTACATGCAGCAAGCGCGATCCATCTCGAGTTGTT GCTTTAGACCTCGAGTCACAGAATATTACAGGCAAAATATTTCCTTGTGTTGCAAACCTC AGTTTCATCTCTAGAATTCACATGCCCGGTAACCATCTCAATGGCCAAATTTCTCCTGAG ATTGGCCGCTTAACCCACCTTACATTCCTTAATCTCAGCATGAATTCCCTTAGTGGTGAG ATACCGGAGACTATATCATCATGTTCCCATCTCGAGATTGTCATCCTGCATAGAAACTCC CTTTCAGGTGAGATCCCTCGAAGTCTTGCTCAGTGTTTATTTCTTCAGCAAATTATTCTA AGCAATAACCATATTCAAGGAAGCATCCCTCCAGAGATTGGTCTCCTTTCCAACCTTTCT GCACTATTTATTCGTAACAATCAACTCACTGGCACCATTCCTCAACTATTAGGGAGTAGC AGATCACTTGTCTGGGTGAATCTCCAGAATAACAGCTTAACTGGGGAGATACCCAATTCC CTGTTCAATTGCACTACCATTTCTTACATAGATCTCTCATATAATGGTCTATCTGGGTCT ATTCCTCCATTCTCACAAACATCTTCATCGCTACGATACCTTAGCTTAACTGAAAACCAC CTCTCTGGTGTGATACCTACCTTAGTTGATAACCTTCCATTGTTGTCCACACTGATGCTT GCTAGAAACAACTTGGAAGGAACAATTCCAGATAGCCTAAGTAAACTTTCTAGTTTACAA ACACTAGACCTAAGTTATAATAATTTGTCAGGTAATGTTCCGCTAGGACTATACGCAATT TCAAATCTTACCTATCTTAACTTTGGTGCCAACCAATTTGTAGGGAGAATTCCCACCAAT ATTGGCTATACCCTTCCAGGACTCACAAGTATAATTCTAGAAGGGAACCAGTTTGAGGGA CCGATTCCTGCTTCGTTGGCCAATGCCTTGAATCTCCAAAATATATATTTTCGAAGGAAC TCATTCGATGGTGTTATTCCTCCATTAGGATCCCTGTCCATGTTGACTTATTTAGATCTA GGTGACAATAAGCTTGAGGCTGGAGATTGGACTTTCATGTCCTCACTAACAAACTGCACC CAACTACAAAATTTGTGGTTGGACAGAAACAATCTCCAAGGAATAATACCATCATCTATT TCCAACCTTTCTGAAAGCCTAAAGGTATTGATCCTAATACAGAACAAATTGACTGGTAGC ATACCTTCCGAGATAGAAAAACTCAGTAGCCTCAGTGTCCTTCAAATGGATAGAAATTTT CTTTCTGGCCAAATTCCTGACACACTAGTAAATCTTCAAAACTTGTCAATCCTAAGTTTG TCCAACAACAAGCTTTCTGGAGAGATCCCACGATCAATTGGAAAATTAGAGCAGCTTACT AAACTTTATCTTCAGGATAATGATTTAACAGGGAAAATACCTTCTAGTTTAGCCAGATGC ACAAATTTGGCAAAACTAAACCTTTCTAGAAATTACCTTAGTGGAAGCATTCCATCAAAA CTATTTTCCATTTCGACACTTTCAGAAGGTTTAGACATATCCTATAATCAACTAACCGGA CATATACCACTGGAGATTGGTAGGTTGATTAATCTTAATTCACTTAACATCTCACACAAC CAATTATCTGGTGAGATTCCCTCTTCTCTTGGGCAGTGCCTTCTGTTGGAATCCATCAGC TTGGAGTCAAATTTTCTACAAGGAAGCATCCCAGAATCTCTTATAAACTTAAGAGGCATC ACGGAGATGGATCTTTCCCAAAACAACTTATCTGGTGAAATCCCAATATATTTTGAGACT TTTGGATCTCTACACACTCTCAATCTGTCCTTCAATAACCTTGAGGGACCAGTCCCTAAA GGAGGTGTGTTTGCAAATTTAAACGATGTGTTTATGCAAGGAAATAAAAAGTTGTGTGGA GGTTCTCCAATGCTACATTTACCACTTTGCAAGGATTTGTCATCCAAAAGGAAAAGGACA CCTTATATTCTTGGTGTAGTCATTCCAATCACTACCATTGTTATAGTCACCTTGGTATGT GTTGCCATCATTCTTATGAAGAAGAGAACTGAACCAAAGGGAACCATTATCAACCATTCA TTCAGGCATTTTGATAAGTTATCGTACAATGATCTGTACAAAGCAACTGATGGTTTCTCT TCAACAAATCTTGTTGGTTCGGGAACATTTGGATTCGTATATAAAGGTCAGTTGAAGTTT GAAGCACGCAATGTTGCAATTAAAGTTTTTAGACTTGACCGAAATGGAGCACCAAACAAC TTTTTTGCTGAATGTGAGGCATTGAAAAACATTCGCCACCGGAATCTTATAAGAGTCATT AGCCTATGCTCAACATTTGATCCATCAGGAAATGAATTCAAAGCACTTATTCTTGAGTTT AGGAGCAATGGGAACCTCGAAAGCTGGATTCATCCAAAAGTGTACAGTCAAAGCCCTCAA AAACGGTTGAGTTTGGGTTCAAGAATTAGAATAGCTGTAGATATTGCAGCTGCATTAGAC TATCTTCATAATCGATGCACTCCTTCTTTGGTTCATTGTGATCTGAAACCAAGCAATGTC CTTTTGGATGATGAAATGGTTGCATGTCTTAGCGACTTTGGACTTGCAAAGTTTCTTCAC AATGACATTATAAGCCTGGAAAATTCATCAAGCTCTGCTGTACTGAGAGGATCAATTGGA TACATTGCTCCAGAGTATGGCTTGGGGTGCAAGGTCTCAACTGAGGGTGATGTATACAGT TTTGGAATAATTGTCCTAGAGATGATCACAGGAAAGCGCCCAACCGATGAGATCTTTAAG GATGGCATGAACCTTCACAGCTTAGTGGAGTCAGCATTTCCACATCAGATGAATGACATT TTAGAACCTACTCTCACCACATATCATGAAGGTGAAGAACCAAATCATGATGTGCTTGAA ATACAAACGTGTGCCATACAGCTGGCTAAGCTTGCGCTGCTGTGCACTGAGCCATCACCA AAAGATCGACCAACAATAGATGATGTTTACGCTGAGATCATTTCCATCAACGACAAGTAT TGTGCACTGATCAACTGAGGAAATGAATGGACATCTTTCAAATTTTAGATA