Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0621400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:24226400:24227678:-1 gene:Os11g0621400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0621400-01)
Sequence

ATGGCGATCTCCTCCGTCTTCCTGCGTCCATCGCTGTTCTCTTCCCCGCCGGCGGCGGCG
GCGGCTTCCTCTCCCCGGCGACATGCAGCAGTGCTACGCGTCACCTCGAGCAAGAGGAGA
CCACTCTTCTCAAGGGCGGCGACGTCGCTGACGGTGAGATGCGAGCAGACGGCGAAGCCA
GGCGGCGGCACCGGCGCCGGCGCCGCCGACGTGTGGCTGAGCCGCCTCGCCATGGTCAGC
TTCTCCACCGCCGTCGTCGTCGAGGTCTCCACCGGCGAAGGCCTCGTCGCGAACTTGGGC
GTGGCGACGCCGGCGCCGACGCTGGCGCTGGTGGTGACGTCACTCGCCGCCGGCCTCGCC
GTCTACTTCATCTTCCAGGCCGGCTCCCGCAACTGA

Peptide Sequence

PEP ID

Os11t0621400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:24226400:24227678:-1 gene:Os11g0621400 transcript:Os11t0621400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0621400-01)
Sequence

MAISSVFLRPSLFSSPPAAAAASSPRRHAAVLRVTSSKRRPLFSRAATSLTVRCEQTAKP
GGGTGAGAADVWLSRLAMVSFSTAVVVEVSTGEGLVANLGVATPAPTLALVVTSLAAGLA
VYFIFQAGSRN

Transcript Sequence

Transcript ID

Os11t0621400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:24226400:24227678:-1 gene:Os11g0621400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0621400-01)
Sequence

AAGAAGAAGCCGAGCAGCAGCAGCAGAGCTTAGCAGCATTCCATGGCGATCTCCTCCGTC
TTCCTGCGTCCATCGCTGTTCTCTTCCCCGCCGGCGGCGGCGGCGGCTTCCTCTCCCCGG
CGACATGCAGCAGTGCTACGCGTCACCTCGAGCAAGAGGAGACCACTCTTCTCAAGGGCG
GCGACGTCGCTGACGGTGAGATGCGAGCAGACGGCGAAGCCAGGCGGCGGCACCGGCGCC
GGCGCCGCCGACGTGTGGCTGAGCCGCCTCGCCATGGTCAGCTTCTCCACCGCCGTCGTC
GTCGAGGTCTCCACCGGCGAAGGCCTCGTCGCGAACTTGGGCGTGGCGACGCCGGCGCCG
ACGCTGGCGCTGGTGGTGACGTCACTCGCCGCCGGCCTCGCCGTCTACTTCATCTTCCAG
GCCGGCTCCCGCAACTGAAGAAACAAACCGAACTGAATCGCTGAAACATCCAAGAACTTG
ACATCTCAACATGTTCTTCTCAACTGATGATGAGAATTAAGATTATTATCTCTGGGATCG
GACTAGTTCTTGCAAATATACAAGCATATATAGAAATGATGATTGATGACATAC