Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0620000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:24166430:24169621:-1 gene:Os11g0620000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 7, TYPE I SIGNAL PEPTIDASE 7 description:Peptidase S26A, signal peptidase I family protein. (Os11t0620000-01)
Sequence

ATGTCCGGGTTCGCGCGGCGCCTCGGCGGGATCCCGTGGAGGGAGATCGCCGGGGAAGCC
TTCTCCCGCGTCTTCCTCGTCGCGCAGGCCGTCTGCGCCGTCCACGTCGTCAACGCCCAC
GTCTGCTCCTTCGCGCTGGTGATGGGCCCGAGCATGCTGCCGGCGATGAACCTGGCGGGG
GACGTGGTGGCGGTGGACCTGGTGAGCGCGCGGCTCGGGCGGGTGGCGAGCGGCGACGCC
GTGCTCCTCGTCTCGCCGGAGAACCCGCGCAAGGCGGTCGTCAAGCGCGTCGTCGGGATG
GAGGGCGACGCCGTCACGTTCCTCGTCGACCCCGGCAACAGCGACGCCTCCAAGACCGTC
GTGGTACCAAAAGGCCATGTCTGGGTGCAGGGTGATAATATTTATGCTTCTAGAGATTCA
AGACAGTTTGGACCTGTCCCTTATGGTCTAATTACAGGGAAGATCTTTTGTCGGGTTTGG
CCACTGAAGGATTTTGGTCCGATAGATCCAATGTCAGCTGAGTAG

Peptide Sequence

PEP ID

Os11t0620000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:24166430:24169621:-1 gene:Os11g0620000 transcript:Os11t0620000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 7, TYPE I SIGNAL PEPTIDASE 7 description:Peptidase S26A, signal peptidase I family protein. (Os11t0620000-01)
Sequence

MSGFARRLGGIPWREIAGEAFSRVFLVAQAVCAVHVVNAHVCSFALVMGPSMLPAMNLAG
DVVAVDLVSARLGRVASGDAVLLVSPENPRKAVVKRVVGMEGDAVTFLVDPGNSDASKTV
VVPKGHVWVQGDNIYASRDSRQFGPVPYGLITGKIFCRVWPLKDFGPIDPMSAE

Transcript Sequence

Transcript ID

Os11t0620000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:24166430:24169621:-1 gene:Os11g0620000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Type I Signal Peptidase 7, TYPE I SIGNAL PEPTIDASE 7 description:Peptidase S26A, signal peptidase I family protein. (Os11t0620000-01)
Sequence

AAAAAAAAAAAAAAAAAACTCTCCCGAGCTCTCCTCGCCGCCGCCGCCATGTCCGGGTTC
GCGCGGCGCCTCGGCGGGATCCCGTGGAGGGAGATCGCCGGGGAAGCCTTCTCCCGCGTC
TTCCTCGTCGCGCAGGCCGTCTGCGCCGTCCACGTCGTCAACGCCCACGTCTGCTCCTTC
GCGCTGGTGATGGGCCCGAGCATGCTGCCGGCGATGAACCTGGCGGGGGACGTGGTGGCG
GTGGACCTGGTGAGCGCGCGGCTCGGGCGGGTGGCGAGCGGCGACGCCGTGCTCCTCGTC
TCGCCGGAGAACCCGCGCAAGGCGGTCGTCAAGCGCGTCGTCGGGATGGAGGGCGACGCC
GTCACGTTCCTCGTCGACCCCGGCAACAGCGACGCCTCCAAGACCGTCGTGGTACCAAAA
GGCCATGTCTGGGTGCAGGGTGATAATATTTATGCTTCTAGAGATTCAAGACAGTTTGGA
CCTGTCCCTTATGGTCTAATTACAGGGAAGATCTTTTGTCGGGTTTGGCCACTGAAGGAT
TTTGGTCCGATAGATCCAATGTCAGCTGAGTAGGGGTAACTCAGCCTTATTTTTCTTCTT
CACTTATTTTCAGAATCCAGGCCTCTCGCTCTACCTTTATCTCTCCGAGCCGACCTTTTT
TTACCCGTTTGCTCCAGAATTTATCGAAGACGGCATGCATATCTTGAGATTTTTATGATC
AGGCAACAAGGCCCTACATTCTGGTTCATGGTGTCTGCCATGGCACATTTTACAGCAAAA
CCGAGAGCATCAAAGTTTATTGCTCAGTTTTTTAACATGAGAATTTTGGCCATAGTCCTC
AAGGGAATCCCAAGTTCTCAACCATGCTCTTGTATAAATTGAACAGTGTAACTTTGGTGT
ACGAAATTTTTAGAACATTATTGAGATAGACCAAAATTTGTAGAACGCTGTTGATTAATT
AATCGAAGTCGCCATGTATCAGAGTTGTTATCGGACAGTGGTAAACGCTTACCGGTTTAA
TAAGTAGAAACAAAATTCTTGTTTTGTCAGGGAT