Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0619800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:24160577:24161934:1 gene:Os11g0619800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os11t0619800-01)
Sequence

ACTTGGTTCCAAGATGGCGGGCTCCTCCCCGTCGGCTGCGGCAAGCGGCGGCGGCTGCGA
AGCGGTGCCGAGCACGTCGACCATCGTGGCCGAGATGGCGACGGGCTCGCACGTGCTCAC
CGTCGACGGCTACTCCGGCACCAAGGGGCTCGCCGTCGGCGTGCACGTCAAGTCCGGCAC
GTTCGTCGCCGGCGGCCACAGCTGGCACATCAAGTACTTCCCCAACGGCGCCACCGACGA
GACCTCCGAGTGGGTCTCCGTCTTCGTCTGCCTCACCGGCAAGTACTCCGACCCGCGAAG
ACGAAGGGCGCCGCCGCGACCGTCAAGGCGCGGTGCAAGCTCACCCTGCTCCTCGACGGC
CGCGACGGGAGGGCGGCATTGCCGCCGCCGCCGCCGTTCACCAAGAGCTGCGAGCTCCGG
ACCTTCTCCTCCGGCAAGGGCGGCTCCGATCAGTGGGGCCACAAGAAGTTCGTGCGGCGG
AAGGAGCTCGAGGACCCGTCGAAGCGTCTCCTCCGCCATGACCGCTTCAGCGTCCGGTGT
GACGTCACCGTCGCCGTGGGGATCCGCACCGACGACACCACCGCGAAGCTCCCGCCACCG
TCCGACCTGCACCGCCACCTCGGCCGCCTCCTCAAGACGAATGCGGGCGCCGACGTCACG
TTCGACGTCGCCGGCCACAAGTTCGCCGCGCACCGGTGCGTCCTCGCCGCGCGGTCGCCG
GTGTTCATGGCGGAGCTCCTCGGCCCGATGAAGGAGGAGGACACCGAGAGCCACGTCGTG
GCCATCCGCGACATGGACGCGAGGGCGTTCAAGGCCATGCTCCACTTCATCTACACCGAC
TCGCTGCCCAATGTCGACGACGGCGGCGAGGCGGCGGCCATGGCGCAGCATCTGCTCGCG
GCGGCGGACAGGTACGACATCGAGAGGCTAAAGCTGATCTGCGAGGACAAGCTAAGCGGC
GGCGTCGACGCGACCACGGCGGCGACGACGCTGGCGCTGGCGGAGCAGCACGGCTGCTGC
CGGCTGAAGGAGGCGTGCCTCAGGTTCATGGCGTCTCCGGCCAACCTCAAGGCGGCCATG
GCGAGCGATGGCTTCGAGCATCTGGCTAAGCTGCCCTTCTCTCCTCAAAGAATTAGTTGC
TAA

Peptide Sequence

PEP ID

Os11t0619800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:24160577:24161934:1 gene:Os11g0619800 transcript:Os11t0619800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os11t0619800-01)
Sequence

TWFQDGGLLPVGCGKRRRLRSGAEHVDHRGRDGDGLARAHRRRLLRHQGARRRRARQVRH
VRRRRPQLAHQVLPQRRHRRDLRVGLRLRLPHRQVLRPAKTKGAAATVKARCKLTLLLDG
RDGRAALPPPPPFTKSCELRTFSSGKGGSDQWGHKKFVRRKELEDPSKRLLRHDRFSVRC
DVTVAVGIRTDDTTAKLPPPSDLHRHLGRLLKTNAGADVTFDVAGHKFAAHRCVLAARSP
VFMAELLGPMKEEDTESHVVAIRDMDARAFKAMLHFIYTDSLPNVDDGGEAAAMAQHLLA
AADRYDIERLKLICEDKLSGGVDATTAATTLALAEQHGCCRLKEACLRFMASPANLKAAM
ASDGFEHLAKLPFSPQRISC

Transcript Sequence

Transcript ID

Os11t0619800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:24160577:24161934:1 gene:Os11g0619800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch related domain containing protein. (Os11t0619800-01)
Sequence

AACTTGGTTCCAAGATGGCGGGCTCCTCCCCGTCGGCTGCGGCAAGCGGCGGCGGCTGCG
AAGCGGTGCCGAGCACGTCGACCATCGTGGCCGAGATGGCGACGGGCTCGCACGTGCTCA
CCGTCGACGGCTACTCCGGCACCAAGGGGCTCGCCGTCGGCGTGCACGTCAAGTCCGGCA
CGTTCGTCGCCGGCGGCCACAGCTGGCACATCAAGTACTTCCCCAACGGCGCCACCGACG
AGACCTCCGAGTGGGTCTCCGTCTTCGTCTGCCTCACCGGCAAGTACTCCGACCCGCGAA
GACGAAGGGCGCCGCCGCGACCGTCAAGGCGCGGTGCAAGCTCACCCTGCTCCTCGACGG
CCGCGACGGGAGGGCGGCATTGCCGCCGCCGCCGCCGTTCACCAAGAGCTGCGAGCTCCG
GACCTTCTCCTCCGGCAAGGGCGGCTCCGATCAGTGGGGCCACAAGAAGTTCGTGCGGCG
GAAGGAGCTCGAGGACCCGTCGAAGCGTCTCCTCCGCCATGACCGCTTCAGCGTCCGGTG
TGACGTCACCGTCGCCGTGGGGATCCGCACCGACGACACCACCGCGAAGCTCCCGCCACC
GTCCGACCTGCACCGCCACCTCGGCCGCCTCCTCAAGACGAATGCGGGCGCCGACGTCAC
GTTCGACGTCGCCGGCCACAAGTTCGCCGCGCACCGGTGCGTCCTCGCCGCGCGGTCGCC
GGTGTTCATGGCGGAGCTCCTCGGCCCGATGAAGGAGGAGGACACCGAGAGCCACGTCGT
GGCCATCCGCGACATGGACGCGAGGGCGTTCAAGGCCATGCTCCACTTCATCTACACCGA
CTCGCTGCCCAATGTCGACGACGGCGGCGAGGCGGCGGCCATGGCGCAGCATCTGCTCGC
GGCGGCGGACAGGTACGACATCGAGAGGCTAAAGCTGATCTGCGAGGACAAGCTAAGCGG
CGGCGTCGACGCGACCACGGCGGCGACGACGCTGGCGCTGGCGGAGCAGCACGGCTGCTG
CCGGCTGAAGGAGGCGTGCCTCAGGTTCATGGCGTCTCCGGCCAACCTCAAGGCGGCCAT
GGCGAGCGATGGCTTCGAGCATCTGGCTAAGCTGCCCTTCTCTCCTCAAAGAATTAGTTG
CTAATCTCGCTGTTTAATTATGCAGTAGAAACTTCATTTCTCCCTGATTATGATCAATGT
GGCGTAGCTGTTATGATCGAAATTTGATGGTTTTTTTCCGATTTGATCATAATTTAAAAA
GTTTGGATGTAATTAGGAAAACCATCACTGACAGAATCGGATTATGCCAAATAGTGCTCT
AATGTCTAATCATAATCAAATCGGAAATCGGTTGGTAT