Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0616200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:23976789:23979855:1 gene:Os11g0616200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0616200-01);Hypothetical gene. (Os11t0616200-02)
Sequence

ATGGACGTTCCGTTGCCCGGCGGGAGCGTCGACCAGTCGGAGGACTACTCCCCGGCGGCC
ACCGTGGTCCGCTTCGACCCGCCGCTCCCGCTCCTCCGTGCGCCCGTCCCGTCGTCTGCC
GCATCCGGCGAGCCACCCGTCCTCGCCTTCCGCGACGCCGCGAGCTGGCGCGCCGCGTGG
GAGGCCGCCGAGGCCAGCCTCCTGTCGCAATGCGAGGCTGGGGCACGGTCTGGGTGTTCA
ATTACTGCATCACGCAAATGCAAGCCACCCTGGTGGAAAGGTTTATTGGGAGGAGCACCA
ACTGACTATCAAGAAAGAGAGAGATGTGAAGAGCGTGAGATGGCCGCTTGTCTTGAAGCA
GCAAGAGAAGCTTGTGTTAAGTTTGCCAAGGAAAAATGCATTGAACCCTTCCGAGATGCA
AGGATTGCTTCTGAGGGTCTTCTTGAAAATACAAAGTTCGCCATCTGGGGTGCTGGTAGT
AACAGAACATCATCAGCATCCTTGTGTATCGCAAACAGTCAGTACCCGTTCAACCCTCGT
CCTGGTTCTACGAACTACAAAGGAAGTGATTTGCTTGATAGTTTTCCGTCTGAAGACAAC
AATATTAAGGACGATGACTGA

Peptide Sequence

PEP ID

Os11t0616200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:23976789:23979855:1 gene:Os11g0616200 transcript:Os11t0616200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0616200-01);Hypothetical gene. (Os11t0616200-02)
Sequence

MDVPLPGGSVDQSEDYSPAATVVRFDPPLPLLRAPVPSSAASGEPPVLAFRDAASWRAAW
EAAEASLLSQCEAGARSGCSITASRKCKPPWWKGLLGGAPTDYQERERCEEREMAACLEA
AREACVKFAKEKCIEPFRDARIASEGLLENTKFAIWGAGSNRTSSASLCIANSQYPFNPR
PGSTNYKGSDLLDSFPSEDNNIKDDD

Transcript Sequence

Transcript ID

Os11t0616200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:23976789:23979855:1 gene:Os11g0616200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0616200-01);Hypothetical gene. (Os11t0616200-02)
Sequence

GACGAAGGCCACTTCCCTCGCCGCCGCCGCCGCGGTTGCCGCCGGCGACCACGTTGCCCC
CACGCCGGTGGCGCGATGGACGTTCCGTTGCCCGGCGGGAGCGTCGACCAGTCGGAGGAC
TACTCCCCGGCGGCCACCGTGGTCCGCTTCGACCCGCCGCTCCCGCTCCTCCGTGCGCCC
GTCCCGTCGTCTGCCGCATCCGGCGAGCCACCCGTCCTCGCCTTCCGCGACGCCGCGAGC
TGGCGCGCCGCGTGGGAGGCCGCCGAGGCCAGCCTCCTGTCGCAATGCGAGGCTGGGGCA
CGGTCTGGGTGTTCAATTACTGCATCACGCAAATGCAAGCCACCCTGGTGGAAAGGTTTA
TTGGGAGGAGCACCAACTGACTATCAAGAAAGAGAGAGATGTGAAGAGCGTGAGATGGCC
GCTTGTCTTGAAGCAGCAAGAGAAGCTTGTGTTAAGTTTGCCAAGGAAAAATGCATTGAA
CCCTTCCGAGATGCAAGGATTGCTTCTGAGGGTCTTCTTGAAAATACAAAGTTCGCCATC
TGGGGTGCTGGTAGTAACAGAACATCATCAGCATCCTTGTGTATCGCAAACAGTCAGTAC
CCGTTCAACCCTCGTCCTGGTTCTACGAACTACAAAGGAAGTGATTTGCTTGATAGTTTT
CCGTCTGAAGACAACAATATTAAGGACGATGACTGAACAACACACCTGCATTGGTAAGAA
ATGGTCTATATATGTTTTCAGAATTGGATGCATTTCAACAAGGGAATTGCTAGAAGCCTA
GAACTAGTGAAAAATCAATGGATTGAAGAACTGAGATTAAATAACTGGAGTCCTGAGGAT
TTACAGCAAGATCTGGAAAGAAAGAAAAACTGGACACCCAAGAATATGTGCATGTTATTT
GTATGACAGTCTTGGTCTGTTTTTTTTACTACGGGGGCAGGCAGGCAGCACAATAAGCGG
AGGATCGGGCCATTTTGATGTCAATTTGATTGAATGGCAGATCCTTTGGAGCTACGAAAA
GCAGAGAAGTACATTGGTTCCTTGTTTTGACAACAACTCTTCCAACTGTCCTGCCTGTAC
TATCTCATTTCTAAGGATTTCACTAAGGAAGCATTATAATGTTGTCACGTTCTGCATTGT
AAATAAATGCCTGCAGAAGTGTGTCTAGAATAGTGGCAAAAGAAGTTACCCTCAAATGAC
TTGAAAATTGACTTCTGAGTTCTGACCACCACAATTTTAGCAGCTAAACTCATGGCTCTC
AATTGTAATTATTTATGTACCTAATTCGATCTGTGCTACTTCCATTGACTAGTTGCAACA
AATAAACCACACCTTCATTTCC